RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 ADAMTSL1Q8N6G6 1762 aa14.27□□□□□ -0.12
HIF3A-204ENST00000300862 USO1O60763 962 aaKnown RBP14.27□□□□□ -0.13
HIF3A-204ENST00000300862 FGFR1OPO95684 399 aaKnown RBP14.27□□□□□ -0.13
HIF3A-204ENST00000300862 SLC1A4P43007 532 aa14.27□□□□□ -0.13
HIF3A-204ENST00000300862 RASSF7Q02833 373 aa14.27□□□□□ -0.13
HIF3A-204ENST00000300862 ARID5AQ03989 594 aa14.27□□□□□ -0.13
HIF3A-204ENST00000300862 EZH2Q15910 746 aaKnown RBP14.27□□□□□ -0.13
HIF3A-204ENST00000300862 HERC4Q5GLZ8 1057 aaPredicted RBP14.27□□□□□ -0.13
HIF3A-204ENST00000300862 NFRKBQ6P4R8 1299 aa14.27□□□□□ -0.13
HIF3A-204ENST00000300862 GPBP1Q86WP2 473 aa14.27□□□□□ -0.13
HIF3A-204ENST00000300862 PLCD3Q8N3E9 789 aa14.27□□□□□ -0.13
HIF3A-204ENST00000300862 TEKT1Q969V4 418 aa14.27□□□□□ -0.13
HIF3A-204ENST00000300862 P2RX7Q99572 595 aaKnown RBP14.27□□□□□ -0.13
HIF3A-204ENST00000300862 GBP3Q9H0R5 595 aa14.27□□□□□ -0.13
HIF3A-204ENST00000300862 UBR3Q6ZT12 1888 aa14.27□□□□□ -0.13
HIF3A-204ENST00000300862 POTEFA5A3E0 1075 aa14.27□□□□□ -0.13
HIF3A-204ENST00000300862 DDTLA6NHG4 134 aaPredicted RBP14.27□□□□□ -0.13
HIF3A-204ENST00000300862 MEIS1O00470 390 aa14.27□□□□□ -0.13
HIF3A-204ENST00000300862 BUB1O43683 1085 aa14.27□□□□□ -0.13
HIF3A-204ENST00000300862 EIF3JO75822 258 aaKnown RBP14.27□□□□□ -0.13
HIF3A-204ENST00000300862 PLA2G4BP0C869 781 aa14.27□□□□□ -0.13
HIF3A-204ENST00000300862 POTEIP0CG38 1075 aa14.27□□□□□ -0.13
HIF3A-204ENST00000300862 RBM5P52756 815 aaKnown RBP eCLIP14.27□□□□□ -0.13
HIF3A-204ENST00000300862 TDRD12Q587J7 1177 aaKnown RBP14.27□□□□□ -0.13
HIF3A-204ENST00000300862 POTEGQ6S5H5 508 aa14.27□□□□□ -0.13
HIF3A-204ENST00000300862 POTEEQ6S8J3 1075 aa14.27□□□□□ -0.13
HIF3A-204ENST00000300862 HDAC7Q8WUI4 952 aa14.27□□□□□ -0.13
HIF3A-204ENST00000300862 ZNF219Q9P2Y4 722 aaPredicted RBP14.27□□□□□ -0.13
HIF3A-204ENST00000300862 ATF5Q9Y2D1 282 aaPredicted RBP14.27□□□□□ -0.13
HIF3A-204ENST00000300862 COL4A3BPQ9Y5P4 624 aa14.27□□□□□ -0.13
HIF3A-204ENST00000300862 KLRG2A4D1S0 409 aaPredicted RBP14.26□□□□□ -0.13
HIF3A-204ENST00000300862 MED24O75448 989 aa14.26□□□□□ -0.13
HIF3A-204ENST00000300862 MAGEA1P43355 309 aa14.26□□□□□ -0.13
HIF3A-204ENST00000300862 CRKP46108 304 aa14.26□□□□□ -0.13
HIF3A-204ENST00000300862 DNA2P51530 1060 aa14.26□□□□□ -0.13
HIF3A-204ENST00000300862 FKBP3Q00688 224 aaKnown RBP14.26□□□□□ -0.13
HIF3A-204ENST00000300862 CKAP4Q07065 602 aaKnown RBP14.26□□□□□ -0.13
HIF3A-204ENST00000300862 ZCWPW2Q504Y3 356 aa14.26□□□□□ -0.13
HIF3A-204ENST00000300862 PPP1R18Q6NYC8 613 aa14.26□□□□□ -0.13
HIF3A-204ENST00000300862 CREG2Q8IUH2 290 aa14.26□□□□□ -0.13
HIF3A-204ENST00000300862 SNX12Q9UMY4 172 aa14.26□□□□□ -0.13
HIF3A-204ENST00000300862 TACC1O75410 805 aa14.26□□□□□ -0.13
HIF3A-204ENST00000300862 PSMD2Q13200 908 aa14.26□□□□□ -0.13
HIF3A-204ENST00000300862 CDC37Q16543 378 aaPredicted RBP14.26□□□□□ -0.13
HIF3A-204ENST00000300862 USH1GQ495M9 461 aa14.26□□□□□ -0.13
HIF3A-204ENST00000300862 PDXDC1Q6P996 788 aa14.26□□□□□ -0.13
HIF3A-204ENST00000300862 FOXR1Q6PIV2 292 aa14.26□□□□□ -0.13
HIF3A-204ENST00000300862 RIN2Q8WYP3 895 aaPredicted RBP14.26□□□□□ -0.13
HIF3A-204ENST00000300862 MTMR8Q96EF0 704 aa14.26□□□□□ -0.13
HIF3A-204ENST00000300862 ANO3Q9BYT9 981 aa14.26□□□□□ -0.13
HIF3A-204ENST00000300862 TSGA10Q9BZW7 698 aa14.26□□□□□ -0.13
HIF3A-204ENST00000300862 BMP2KQ9NSY1 1161 aaPredicted RBP14.26□□□□□ -0.13
HIF3A-204ENST00000300862 ANO9A1A5B4 782 aa14.25□□□□□ -0.13
HIF3A-204ENST00000300862 GDF11O95390 407 aa14.25□□□□□ -0.13
HIF3A-204ENST00000300862 KRT18P05783 430 aaKnown RBP14.25□□□□□ -0.13
HIF3A-204ENST00000300862 NAP1L1P55209 391 aaKnown RBP14.25□□□□□ -0.13
HIF3A-204ENST00000300862 POLR2FP61218 127 aaKnown RBP14.25□□□□□ -0.13
HIF3A-204ENST00000300862 PSMC6P62333 389 aa14.25□□□□□ -0.13
HIF3A-204ENST00000300862 SEPT2Q15019 361 aa14.25□□□□□ -0.13
HIF3A-204ENST00000300862 PRR16Q569H4 304 aa14.25□□□□□ -0.13
HIF3A-204ENST00000300862 SLFN13Q68D06 897 aa14.25□□□□□ -0.13
HIF3A-204ENST00000300862 PROM2Q8N271 834 aa14.25□□□□□ -0.13
HIF3A-204ENST00000300862 TRIM58Q8NG06 486 aa14.25□□□□□ -0.13
HIF3A-204ENST00000300862 SCFD1Q8WVM8 642 aa14.25□□□□□ -0.13
HIF3A-204ENST00000300862 LSM14BQ9BX40 385 aaKnown RBP14.25□□□□□ -0.13
HIF3A-204ENST00000300862 LRRC27Q9C0I9 530 aa14.25□□□□□ -0.13
HIF3A-204ENST00000300862 JRKLQ9Y4A0 524 aa14.25□□□□□ -0.13
HIF3A-204ENST00000300862 TLR2O60603 784 aa14.25□□□□□ -0.13
HIF3A-204ENST00000300862 NOL4O94818 638 aa14.25□□□□□ -0.13
HIF3A-204ENST00000300862 CYP11B2P19099 503 aa14.25□□□□□ -0.13
HIF3A-204ENST00000300862 CASP5P51878 434 aa14.25□□□□□ -0.13
HIF3A-204ENST00000300862 SLC7A5Q01650 507 aa14.25□□□□□ -0.13
HIF3A-204ENST00000300862 HGSNATQ68CP4 663 aa14.25□□□□□ -0.13
HIF3A-204ENST00000300862 BCAS3Q9H6U6 928 aa14.25□□□□□ -0.13
HIF3A-204ENST00000300862 SUGT1Q9Y2Z0 365 aa14.25□□□□□ -0.13
HIF3A-204ENST00000300862 PCDHA2Q9Y5H9 948 aa14.25□□□□□ -0.13
HIF3A-204ENST00000300862 FOCADQ5VW36 1801 aa14.25□□□□□ -0.13
HIF3A-204ENST00000300862 GCFC2P16383 781 aaKnown RBP14.24□□□□□ -0.13
HIF3A-204ENST00000300862 IKQ13123 557 aaPredicted RBP14.24□□□□□ -0.13
HIF3A-204ENST00000300862 CERKLQ49MI3 558 aaPredicted RBP14.24□□□□□ -0.13
HIF3A-204ENST00000300862 HSP90B2PQ58FF3 399 aa14.24□□□□□ -0.13
HIF3A-204ENST00000300862 ARSHQ5FYA8 562 aa14.24□□□□□ -0.13
HIF3A-204ENST00000300862 FAM83BQ5T0W9 1011 aa14.24□□□□□ -0.13
HIF3A-204ENST00000300862 SLC30A10Q6XR72 485 aa14.24□□□□□ -0.13
HIF3A-204ENST00000300862 SIAH1Q8IUQ4 282 aa14.24□□□□□ -0.13
HIF3A-204ENST00000300862 CCDC65Q8IXS2 484 aa14.24□□□□□ -0.13
HIF3A-204ENST00000300862 MSL3Q8N5Y2 521 aaKnown RBP14.24□□□□□ -0.13
HIF3A-204ENST00000300862 MEIS2O14770 477 aa14.24□□□□□ -0.13
HIF3A-204ENST00000300862 TUBBP07437 444 aa14.24□□□□□ -0.13
HIF3A-204ENST00000300862 PABPC4Q13310 644 aaKnown RBP eCLIP14.24□□□□□ -0.13
HIF3A-204ENST00000300862 LEKR1Q6ZMV7 388 aa14.24□□□□□ -0.13
HIF3A-204ENST00000300862 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.24□□□□□ -0.13
HIF3A-204ENST00000300862 SH3BP5LQ7L8J4 393 aa14.24□□□□□ -0.13
HIF3A-204ENST00000300862 OSBPL9Q96SU4 736 aa14.24□□□□□ -0.13
HIF3A-204ENST00000300862 LRRC1Q9BTT6 524 aa14.24□□□□□ -0.13
HIF3A-204ENST00000300862 NT5C3AQ9H0P0 336 aa14.24□□□□□ -0.13
HIF3A-204ENST00000300862 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.24□□□□□ -0.13
HIF3A-204ENST00000300862 MYH4Q9Y623 1939 aa14.23□□□□□ -0.13
HIF3A-204ENST00000300862 ASTE1Q2TB18 679 aaPredicted RBP14.23□□□□□ -0.13
HIF3A-204ENST00000300862 HHIPL2Q6UWX4 724 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms