RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 SLC39A14Q15043 492 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 GJB4Q9NTQ9 266 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 LRFN2Q9ULH4 789 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PPP6R2O75170 966 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 NCF2P19878 526 aaPredicted RBP14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 ADD2P35612 726 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 IQCB1Q15051 598 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PPP4R4Q6NUP7 873 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 SRP68Q9UHB9 627 aaKnown RBP14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 DAAM1Q9Y4D1 1078 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 CFLARO15519 480 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 CASP1P29466 404 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 CACNB3P54284 484 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 CYP27A1Q02318 531 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 MAP3K21Q5TCX8 1036 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 FAM196AQ6ZSG2 479 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 ARHGEF18Q6ZSZ5 1173 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 FOXP1Q9H334 677 aaPredicted RBP14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 KCNG1Q9UIX4 513 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 LTKP29376 864 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 GYS2P54840 703 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PHEXP78562 749 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 MORC4Q8TE76 937 aa14.7□□□□□ -0.06
CHRFAM7A-201ENST00000299847 MMP1P03956 469 aa14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 SSTR3P32745 418 aaPredicted RBP14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 OSBP2Q969R2 916 aa14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 CDC23Q9UJX2 597 aa14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PCDHA13Q9Y5I0 950 aa14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 KIF24Q5T7B8 1368 aa14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 GSTA4O15217 222 aa14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PLEKHA8P1O95397 391 aa14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 ECEL1O95672 775 aa14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 UBE3CQ15386 1083 aa14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 SYDE2Q5VT97 1194 aa14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 CCDC197Q8NCU1 140 aa14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 TSR3Q9UJK0 312 aaKnown RBP14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 MCF2LO15068 1137 aa14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 STAT2P52630 851 aa14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 KIF23Q02241 960 aaPredicted RBP14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 ASPRV1Q53RT3 343 aa14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 RAB44Q7Z6P3 723 aaPredicted RBP14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 TTC30AQ86WT1 665 aa14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 SLC7A3Q8WY07 619 aa14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PPP1R9AQ9ULJ8 1098 aa14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 H0YCG3 227 aa14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 DHX9Q08211 1270 aaKnown RBP14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 ZNF394Q53GI3 561 aa14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 TMTC3Q6ZXV5 915 aa14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 MAP7D3Q8IWC1 876 aa14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 CACTINQ8WUQ7 758 aaKnown RBP14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 NLRP4Q96MN2 994 aa14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 DNMT1P26358 1616 aaKnown RBP14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 TTC4O95801 387 aa14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 DNAJC24Q6P3W2 148 aa14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 ZSWIM5Q9P217 1185 aa14.69□□□□□ -0.06
CHRFAM7A-201ENST00000299847 MGEA5O60502 916 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 SERPINB2P05120 415 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 THOC5Q13769 683 aaKnown RBP14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 ZNF449Q6P9G9 518 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 METTL23Q86XA0 190 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 FGD4Q96M96 766 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PIH1D3Q9NQM4 214 aaKnown RBP14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 ATP7AQ04656 1500 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 EIF2AK2P19525 551 aaKnown RBP14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 SPOPLQ6IQ16 392 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PASD1Q8IV76 773 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 MAML1Q92585 1016 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PLXNC1O60486 1568 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 SH2B2O14492 632 aaPredicted RBP14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PFDN6O15212 129 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 SUN1O94901 812 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 RASIP1Q5U651 963 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 LCA5Q86VQ0 697 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 BBOF1Q8ND07 529 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PAGE5Q96GU1 130 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 CPVLQ9H3G5 476 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 ATF5Q9Y2D1 282 aaPredicted RBP14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 ZBBXA8MT70 800 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 ZNF500O60304 480 aaPredicted RBP14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 MECOMQ03112 1051 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 ARID5BQ14865 1188 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PIP4K2CQ8TBX8 421 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PIGOQ8TEQ8 1089 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 GINM1Q9NU53 330 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 FAF1Q9UNN5 650 aaPredicted RBP14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 NOVA2Q9UNW9 492 aaKnown RBP14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 ABCC12Q96J65 1359 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PLA2G4BP0C869 781 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 OSBPP22059 807 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 AOC3Q16853 763 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 ZNF668Q96K58 619 aaPredicted RBP14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 AP5M1Q9H0R1 490 aa14.68□□□□□ -0.06
CHRFAM7A-201ENST00000299847 BICRAQ9NZM4 1560 aa14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PLEKHF1Q96S99 279 aa14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 HACD3Q9P035 362 aa14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 LRRD1A4D1F6 860 aa14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 RWDD4Q6NW29 188 aaKnown RBP14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 RETREG2Q8NC44 543 aa14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 ATP6V0A1Q93050 837 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms