RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 CCDC47Q96A33 483 aaKnown RBP28.61■■■□□ 2.17
SDCCAG3-201ENST00000298537 ZNF577Q9BSK1 485 aa28.61■■■□□ 2.17
SDCCAG3-201ENST00000298537 STIM1Q13586 685 aa28.61■■■□□ 2.17
SDCCAG3-201ENST00000298537 TMEM132BQ14DG7 1078 aa28.61■■■□□ 2.17
SDCCAG3-201ENST00000298537 MXRA8Q9BRK3 442 aa28.61■■■□□ 2.17
SDCCAG3-201ENST00000298537 ZNF214Q9UL59 606 aaPredicted RBP28.61■■■□□ 2.17
SDCCAG3-201ENST00000298537 TREML2Q5T2D2 321 aa28.6■■■□□ 2.17
SDCCAG3-201ENST00000298537 SNRNP48Q6IEG0 339 aaKnown RBP28.6■■■□□ 2.17
SDCCAG3-201ENST00000298537 CATSPERGQ6ZRH7 1159 aa28.6■■■□□ 2.17
SDCCAG3-201ENST00000298537 CLMNQ96JQ2 1002 aa28.6■■■□□ 2.17
SDCCAG3-201ENST00000298537 UNC45AQ9H3U1 944 aa28.6■■■□□ 2.17
SDCCAG3-201ENST00000298537 RNF146Q9NTX7 359 aa28.6■■■□□ 2.17
SDCCAG3-201ENST00000298537 LIMA1Q9UHB6 759 aaKnown RBP28.6■■■□□ 2.17
SDCCAG3-201ENST00000298537 C19orf81C9J6K1 198 aa28.6■■■□□ 2.17
SDCCAG3-201ENST00000298537 CCNE1P24864 410 aa28.6■■■□□ 2.17
SDCCAG3-201ENST00000298537 ADKP55263 362 aaKnown RBP28.6■■■□□ 2.17
SDCCAG3-201ENST00000298537 MAP3K9P80192 1104 aa28.6■■■□□ 2.17
SDCCAG3-201ENST00000298537 SPECC1LQ69YQ0 1117 aa28.6■■■□□ 2.17
SDCCAG3-201ENST00000298537 MCF2L2Q86YR7 1114 aa28.6■■■□□ 2.17
SDCCAG3-201ENST00000298537 ERMNQ8TAM6 284 aa28.6■■■□□ 2.17
SDCCAG3-201ENST00000298537 PIGOQ8TEQ8 1089 aa28.6■■■□□ 2.17
SDCCAG3-201ENST00000298537 DHTKD1Q96HY7 919 aaPredicted RBP28.6■■■□□ 2.17
SDCCAG3-201ENST00000298537 DYDC2Q96IM9 177 aa28.6■■■□□ 2.17
SDCCAG3-201ENST00000298537 EHMT1Q9H9B1 1298 aa28.6■■■□□ 2.17
SDCCAG3-201ENST00000298537 WRAP73Q9P2S5 460 aaPredicted RBP28.6■■■□□ 2.17
SDCCAG3-201ENST00000298537 GAS7O60861 476 aa28.59■■■□□ 2.17
SDCCAG3-201ENST00000298537 PANK4Q9NVE7 773 aa28.59■■■□□ 2.17
SDCCAG3-201ENST00000298537 PBX1P40424 430 aa28.59■■■□□ 2.17
SDCCAG3-201ENST00000298537 COPB1P53618 953 aaKnown RBP28.59■■■□□ 2.17
SDCCAG3-201ENST00000298537 GHRHRQ02643 423 aa28.59■■■□□ 2.17
SDCCAG3-201ENST00000298537 BAATQ14032 418 aaPredicted RBP28.59■■■□□ 2.17
SDCCAG3-201ENST00000298537 CCDC150Q8NCX0 1101 aa28.59■■■□□ 2.17
SDCCAG3-201ENST00000298537 HSD17B14Q9BPX1 270 aa28.59■■■□□ 2.17
SDCCAG3-201ENST00000298537 SLITRK3O94933 977 aa28.58■■■□□ 2.17
SDCCAG3-201ENST00000298537 COG2Q14746 738 aa28.58■■■□□ 2.17
SDCCAG3-201ENST00000298537 RNF207Q6ZRF8 634 aa28.58■■■□□ 2.17
SDCCAG3-201ENST00000298537 CSGALNACT2Q8N6G5 542 aa28.58■■■□□ 2.17
SDCCAG3-201ENST00000298537 KCNH7Q9NS40 1196 aa28.58■■■□□ 2.17
SDCCAG3-201ENST00000298537 TMOD4Q9NZQ9 345 aa28.58■■■□□ 2.17
SDCCAG3-201ENST00000298537 ADAMTS5Q9UNA0 930 aa28.58■■■□□ 2.17
SDCCAG3-201ENST00000298537 LRRC10BA6NIK2 292 aa28.58■■■□□ 2.17
SDCCAG3-201ENST00000298537 IPO5O00410 1097 aaKnown RBP28.58■■■□□ 2.17
SDCCAG3-201ENST00000298537 TEX2Q8IWB9 1127 aa28.58■■■□□ 2.17
SDCCAG3-201ENST00000298537 TPH2Q8IWU9 490 aa28.58■■■□□ 2.17
SDCCAG3-201ENST00000298537 BHMT2Q9H2M3 363 aa28.58■■■□□ 2.17
SDCCAG3-201ENST00000298537 ELP3Q9H9T3 547 aa28.58■■■□□ 2.17
SDCCAG3-201ENST00000298537 PPP2R5CQ13362 524 aa28.57■■■□□ 2.16
SDCCAG3-201ENST00000298537 OTOFQ9HC10 1997 aa28.57■■■□□ 2.16
SDCCAG3-201ENST00000298537 SPDYE16A6NNV3 312 aaPredicted RBP28.57■■■□□ 2.16
SDCCAG3-201ENST00000298537 N4BP3O15049 544 aa28.57■■■□□ 2.16
SDCCAG3-201ENST00000298537 MYCLP12524 364 aaPredicted RBP28.57■■■□□ 2.16
SDCCAG3-201ENST00000298537 ZHX3Q9H4I2 956 aa28.57■■■□□ 2.16
SDCCAG3-201ENST00000298537 TRMT1Q9NXH9 659 aaKnown RBP28.57■■■□□ 2.16
SDCCAG3-201ENST00000298537 DNM3Q9UQ16 869 aa28.57■■■□□ 2.16
SDCCAG3-201ENST00000298537 RBBP6Q7Z6E9 1792 aaKnown RBP28.56■■■□□ 2.16
SDCCAG3-201ENST00000298537 SEMA3FQ13275 785 aa28.56■■■□□ 2.16
SDCCAG3-201ENST00000298537 ITGB3BPQ13352 177 aaPredicted RBP28.56■■■□□ 2.16
SDCCAG3-201ENST00000298537 PLS1Q14651 629 aa28.56■■■□□ 2.16
SDCCAG3-201ENST00000298537 PGM5Q15124 567 aa28.56■■■□□ 2.16
SDCCAG3-201ENST00000298537 ILDR2Q71H61 639 aa28.56■■■□□ 2.16
SDCCAG3-201ENST00000298537 TC2NQ8N9U0 490 aa28.56■■■□□ 2.16
SDCCAG3-201ENST00000298537 CPLX3Q8WVH0 158 aa28.56■■■□□ 2.16
SDCCAG3-201ENST00000298537 RUSC1Q9BVN2 902 aa28.56■■■□□ 2.16
SDCCAG3-201ENST00000298537 PCDHA2Q9Y5H9 948 aa28.56■■■□□ 2.16
SDCCAG3-201ENST00000298537 WDR90Q96KV7 1748 aa28.56■■■□□ 2.16
SDCCAG3-201ENST00000298537 RSPH10B2B2RC85 870 aa28.55■■■□□ 2.16
SDCCAG3-201ENST00000298537 RSPH10BP0C881 870 aa28.55■■■□□ 2.16
SDCCAG3-201ENST00000298537 TKFCQ3LXA3 575 aa28.55■■■□□ 2.16
SDCCAG3-201ENST00000298537 DNTTIP2Q5QJE6 756 aaKnown RBP28.55■■■□□ 2.16
SDCCAG3-201ENST00000298537 RMDN3Q96TC7 470 aa28.55■■■□□ 2.16
SDCCAG3-201ENST00000298537 POLR3CQ9BUI4 534 aaPredicted RBP28.55■■■□□ 2.16
SDCCAG3-201ENST00000298537 EPHX2P34913 555 aa28.55■■■□□ 2.16
SDCCAG3-201ENST00000298537 CENPPQ6IPU0 288 aa28.55■■■□□ 2.16
SDCCAG3-201ENST00000298537 B3GNT9Q6UX72 402 aa28.55■■■□□ 2.16
SDCCAG3-201ENST00000298537 SYT2Q8N9I0 419 aaPredicted RBP28.55■■■□□ 2.16
SDCCAG3-201ENST00000298537 CDCA5Q96FF9 252 aa28.55■■■□□ 2.16
SDCCAG3-201ENST00000298537 CTAGE1Q96RT6 745 aa28.55■■■□□ 2.16
SDCCAG3-201ENST00000298537 LRRC27Q9C0I9 530 aa28.55■■■□□ 2.16
SDCCAG3-201ENST00000298537 R3HCC1Q9Y3T6 440 aaKnown RBP28.55■■■□□ 2.16
SDCCAG3-201ENST00000298537 ERCC3P19447 782 aa28.54■■■□□ 2.16
SDCCAG3-201ENST00000298537 GIT2Q14161 759 aa28.54■■■□□ 2.16
SDCCAG3-201ENST00000298537 REEP2Q9BRK0 252 aa28.54■■■□□ 2.16
SDCCAG3-201ENST00000298537 UBIAD1Q9Y5Z9 338 aa28.54■■■□□ 2.16
SDCCAG3-201ENST00000298537 IRF6O14896 467 aa28.54■■■□□ 2.16
SDCCAG3-201ENST00000298537 KRT18P05783 430 aaKnown RBP28.54■■■□□ 2.16
SDCCAG3-201ENST00000298537 SETQ01105 290 aaPredicted RBP28.54■■■□□ 2.16
SDCCAG3-201ENST00000298537 COBLL1Q53SF7 1204 aa28.54■■■□□ 2.16
SDCCAG3-201ENST00000298537 HERC4Q5GLZ8 1057 aaPredicted RBP28.54■■■□□ 2.16
SDCCAG3-201ENST00000298537 FAM26FQ5R3K3 315 aa28.54■■■□□ 2.16
SDCCAG3-201ENST00000298537 PCNX4Q63HM2 1172 aa28.54■■■□□ 2.16
SDCCAG3-201ENST00000298537 DPY19L2Q6NUT2 758 aa28.54■■■□□ 2.16
SDCCAG3-201ENST00000298537 TMEM139Q8IV31 216 aa28.54■■■□□ 2.16
SDCCAG3-201ENST00000298537 OTUD5Q96G74 571 aa28.54■■■□□ 2.16
SDCCAG3-201ENST00000298537 PDCD2LQ9BRP1 358 aa28.54■■■□□ 2.16
SDCCAG3-201ENST00000298537 THAP9Q9H5L6 903 aa28.54■■■□□ 2.16
SDCCAG3-201ENST00000298537 PXMP2Q9NR77 195 aa28.54■■■□□ 2.16
SDCCAG3-201ENST00000298537 BMP2KQ9NSY1 1161 aaPredicted RBP28.54■■■□□ 2.16
SDCCAG3-201ENST00000298537 DHX15O43143 795 aaKnown RBP28.53■■■□□ 2.16
SDCCAG3-201ENST00000298537 PPP1R12BO60237 982 aaPredicted RBP28.53■■■□□ 2.16
SDCCAG3-201ENST00000298537 RBL2Q08999 1139 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms