RNA–Protein interactions for RNA: ENST00000297354.6

SBSPON-201, Transcript of somatomedin B and thrombospondin type 1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SBSPON, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPON-201ENST00000297354 CTCFP49711 727 aaPredicted RBP18.22■□□□□ 0.51
SBSPON-201ENST00000297354 RAD23BP54727 409 aa18.22■□□□□ 0.51
SBSPON-201ENST00000297354 SLC30A9Q6PML9 568 aa18.22■□□□□ 0.51
SBSPON-201ENST00000297354 GLG1Q92896 1179 aa18.22■□□□□ 0.51
SBSPON-201ENST00000297354 DCAF5Q96JK2 942 aa18.22■□□□□ 0.51
SBSPON-201ENST00000297354 TRIM7Q9C029 511 aa18.22■□□□□ 0.51
SBSPON-201ENST00000297354 MTRF1LQ9UGC7 380 aaKnown RBP18.22■□□□□ 0.51
SBSPON-201ENST00000297354 SUN1O94901 812 aa18.22■□□□□ 0.51
SBSPON-201ENST00000297354 GYG1P46976 350 aa18.22■□□□□ 0.51
SBSPON-201ENST00000297354 ZMYND12Q9H0C1 365 aa18.22■□□□□ 0.51
SBSPON-201ENST00000297354 MYH8P13535 1937 aa18.22■□□□□ 0.51
SBSPON-201ENST00000297354 RFX7Q2KHR2 1363 aa18.21■□□□□ 0.51
SBSPON-201ENST00000297354 A0A087X0T9 212 aa18.21■□□□□ 0.51
SBSPON-201ENST00000297354 FAM228BP0C875 321 aa18.21■□□□□ 0.51
SBSPON-201ENST00000297354 GBP1P32455 592 aa18.21■□□□□ 0.51
SBSPON-201ENST00000297354 TRIP13Q15645 432 aaPredicted RBP18.21■□□□□ 0.51
SBSPON-201ENST00000297354 RASIP1Q5U651 963 aa18.21■□□□□ 0.51
SBSPON-201ENST00000297354 CAVIN3Q969G5 261 aa18.21■□□□□ 0.51
SBSPON-201ENST00000297354 KLHL14Q9P2G3 628 aa18.21■□□□□ 0.51
SBSPON-201ENST00000297354 STK36Q9NRP7 1315 aa18.21■□□□□ 0.51
SBSPON-201ENST00000297354 TNRQ92752 1358 aa18.21■□□□□ 0.51
SBSPON-201ENST00000297354 PCCAP05165 728 aaPredicted RBP18.21■□□□□ 0.51
SBSPON-201ENST00000297354 BIRC3Q13489 604 aa18.21■□□□□ 0.51
SBSPON-201ENST00000297354 ZNF444Q8N0Y2 327 aaPredicted RBP18.21■□□□□ 0.51
SBSPON-201ENST00000297354 C15orf41Q9Y2V0 281 aa18.21■□□□□ 0.51
SBSPON-201ENST00000297354 DAAM1Q9Y4D1 1078 aa18.21■□□□□ 0.51
SBSPON-201ENST00000297354 SIGLEC1Q9BZZ2 1709 aa18.21■□□□□ 0.51
SBSPON-201ENST00000297354 TRAPPC3O43617 180 aa18.21■□□□□ 0.51
SBSPON-201ENST00000297354 SHBGP04278 402 aa18.21■□□□□ 0.51
SBSPON-201ENST00000297354 ACTN1P12814 892 aa18.21■□□□□ 0.51
SBSPON-201ENST00000297354 ARHGAP44Q17R89 818 aa18.21■□□□□ 0.51
SBSPON-201ENST00000297354 KRT79Q5XKE5 535 aa18.21■□□□□ 0.51
SBSPON-201ENST00000297354 PDXDC2PQ6P474 469 aa18.21■□□□□ 0.51
SBSPON-201ENST00000297354 DNAJC10Q8IXB1 793 aa18.21■□□□□ 0.51
SBSPON-201ENST00000297354 SRBD1Q8N5C6 995 aaKnown RBP18.21■□□□□ 0.51
SBSPON-201ENST00000297354 FAXDC2Q96IV6 333 aa18.21■□□□□ 0.51
SBSPON-201ENST00000297354 GNAT1P11488 350 aa18.2■□□□□ 0.5
SBSPON-201ENST00000297354 ATP2A2P16615 1042 aaKnown RBP18.2■□□□□ 0.5
SBSPON-201ENST00000297354 ZBTB16Q05516 673 aa18.2■□□□□ 0.5
SBSPON-201ENST00000297354 PUM3Q15397 648 aaKnown RBP18.2■□□□□ 0.5
SBSPON-201ENST00000297354 BZW1Q7L1Q6 419 aaKnown RBP18.2■□□□□ 0.5
SBSPON-201ENST00000297354 ERICH1Q86X53 443 aa18.2■□□□□ 0.5
SBSPON-201ENST00000297354 CHORDC1Q9UHD1 332 aaPredicted RBP18.2■□□□□ 0.5
SBSPON-201ENST00000297354 PLAGL2Q9UPG8 496 aa18.2■□□□□ 0.5
SBSPON-201ENST00000297354 BCS1LQ9Y276 419 aa18.2■□□□□ 0.5
SBSPON-201ENST00000297354 IFT172Q9UG01 1749 aa18.2■□□□□ 0.5
SBSPON-201ENST00000297354 DIP2CQ9Y2E4 1556 aa18.2■□□□□ 0.5
SBSPON-201ENST00000297354 CCDC169A6NNP5 214 aa18.2■□□□□ 0.5
SBSPON-201ENST00000297354 DRP2Q13474 957 aa18.2■□□□□ 0.5
SBSPON-201ENST00000297354 PLS1Q14651 629 aa18.2■□□□□ 0.5
SBSPON-201ENST00000297354 NEK9Q8TD19 979 aa18.2■□□□□ 0.5
SBSPON-201ENST00000297354 HOOK2Q96ED9 719 aa18.2■□□□□ 0.5
SBSPON-201ENST00000297354 PCDHB13Q9Y5F0 798 aa18.2■□□□□ 0.5
SBSPON-201ENST00000297354 LRRC10BA6NIK2 292 aa18.2■□□□□ 0.5
SBSPON-201ENST00000297354 EIF6P56537 245 aaKnown RBP18.2■□□□□ 0.5
SBSPON-201ENST00000297354 TTI2Q6NXR4 508 aa18.2■□□□□ 0.5
SBSPON-201ENST00000297354 TMED8Q6PL24 325 aaPredicted RBP18.2■□□□□ 0.5
SBSPON-201ENST00000297354 RPUSD2Q8IZ73 545 aaKnown RBP18.2■□□□□ 0.5
SBSPON-201ENST00000297354 TAOK3Q9H2K8 898 aa18.2■□□□□ 0.5
SBSPON-201ENST00000297354 NKIRAS1Q9NYS0 192 aa18.2■□□□□ 0.5
SBSPON-201ENST00000297354 ASIC3Q9UHC3 531 aa18.2■□□□□ 0.5
SBSPON-201ENST00000297354 CCDC189A1A4V9 331 aa18.19■□□□□ 0.5
SBSPON-201ENST00000297354 MSH2P43246 934 aa18.19■□□□□ 0.5
SBSPON-201ENST00000297354 IFI35P80217 286 aaPredicted RBP18.19■□□□□ 0.5
SBSPON-201ENST00000297354 RDH13Q8NBN7 331 aa18.19■□□□□ 0.5
SBSPON-201ENST00000297354 DLC1Q96QB1 1528 aa18.19■□□□□ 0.5
SBSPON-201ENST00000297354 A2ML1A8K2U0 1454 aa18.19■□□□□ 0.5
SBSPON-201ENST00000297354 EPB41P11171 864 aaKnown RBP18.19■□□□□ 0.5
SBSPON-201ENST00000297354 ALDH5A1P51649 535 aaPredicted RBP18.19■□□□□ 0.5
SBSPON-201ENST00000297354 TFAP4Q01664 338 aa18.19■□□□□ 0.5
SBSPON-201ENST00000297354 CALCOCO2Q13137 446 aa18.19■□□□□ 0.5
SBSPON-201ENST00000297354 ALKBH5Q6P6C2 394 aaKnown RBP18.19■□□□□ 0.5
SBSPON-201ENST00000297354 RPGRQ92834 1020 aaKnown RBP18.19■□□□□ 0.5
SBSPON-201ENST00000297354 GJA10Q969M2 543 aa18.19■□□□□ 0.5
SBSPON-201ENST00000297354 PHF20Q9BVI0 1012 aa18.19■□□□□ 0.5
SBSPON-201ENST00000297354 RASAL2Q9UJF2 1139 aa18.19■□□□□ 0.5
SBSPON-201ENST00000297354 AMFRQ9UKV5 643 aa18.19■□□□□ 0.5
SBSPON-201ENST00000297354 CETN3O15182 167 aa18.19■□□□□ 0.5
SBSPON-201ENST00000297354 PRPF3O43395 683 aaKnown RBP18.19■□□□□ 0.5
SBSPON-201ENST00000297354 TSPY3P0CV98 308 aa18.19■□□□□ 0.5
SBSPON-201ENST00000297354 TSPY8P0CW00 308 aa18.19■□□□□ 0.5
SBSPON-201ENST00000297354 TSNAXIP1Q2TAA8 658 aa18.19■□□□□ 0.5
SBSPON-201ENST00000297354 CHADLQ6NUI6 762 aa18.19■□□□□ 0.5
SBSPON-201ENST00000297354 USP38Q8NB14 1042 aa18.19■□□□□ 0.5
SBSPON-201ENST00000297354 CIAO1O76071 339 aa18.18■□□□□ 0.5
SBSPON-201ENST00000297354 CALM1P0DP23 149 aa18.18■□□□□ 0.5
SBSPON-201ENST00000297354 CALM2P0DP24 149 aa18.18■□□□□ 0.5
SBSPON-201ENST00000297354 CALM3P0DP25 149 aa18.18■□□□□ 0.5
SBSPON-201ENST00000297354 GNAT2P19087 354 aa18.18■□□□□ 0.5
SBSPON-201ENST00000297354 PRDM11Q9NQV5 511 aa18.18■□□□□ 0.5
SBSPON-201ENST00000297354 TMOD3Q9NYL9 352 aa18.18■□□□□ 0.5
SBSPON-201ENST00000297354 JCADQ9P266 1359 aa18.18■□□□□ 0.5
SBSPON-201ENST00000297354 RASGRF2O14827 1237 aa18.18■□□□□ 0.5
SBSPON-201ENST00000297354 CYP2D6P10635 497 aa18.18■□□□□ 0.5
SBSPON-201ENST00000297354 RNASELQ05823 741 aaKnown RBP18.18■□□□□ 0.5
SBSPON-201ENST00000297354 SPATA20Q8TB22 786 aa18.18■□□□□ 0.5
SBSPON-201ENST00000297354 POTEMA6NI47 508 aa18.18■□□□□ 0.5
SBSPON-201ENST00000297354 H2AFZP0C0S5 128 aa18.18■□□□□ 0.5
SBSPON-201ENST00000297354 PLCB4Q15147 1175 aa18.18■□□□□ 0.5
SBSPON-201ENST00000297354 H2AFVQ71UI9 128 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms