RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 TAX1BP1Q86VP1 789 aa21.1■□□□□ 0.97
TRA2A-201ENST00000297071 TBCKQ8TEA7 893 aa21.1■□□□□ 0.97
TRA2A-201ENST00000297071 CDK5RAP3Q96JB5 506 aa21.1■□□□□ 0.97
TRA2A-201ENST00000297071 COL16A1Q07092 1604 aaPredicted RBP21.09■□□□□ 0.97
TRA2A-201ENST00000297071 TLR2O60603 784 aa21.09■□□□□ 0.97
TRA2A-201ENST00000297071 CALCRLQ16602 461 aa21.09■□□□□ 0.97
TRA2A-201ENST00000297071 C6orf89Q6UWU4 347 aa21.09■□□□□ 0.97
TRA2A-201ENST00000297071 REXO1Q8N1G1 1221 aaKnown RBP21.09■□□□□ 0.97
TRA2A-201ENST00000297071 NEDD1Q8NHV4 660 aa21.09■□□□□ 0.97
TRA2A-201ENST00000297071 WDR66Q8TBY9 1149 aa21.09■□□□□ 0.97
TRA2A-201ENST00000297071 ACTRT1Q8TDG2 376 aa21.09■□□□□ 0.97
TRA2A-201ENST00000297071 SCFD2Q8WU76 684 aa21.09■□□□□ 0.97
TRA2A-201ENST00000297071 ACTR5Q9H9F9 607 aaPredicted RBP21.09■□□□□ 0.97
TRA2A-201ENST00000297071 EHD2Q9NZN4 543 aa21.09■□□□□ 0.97
TRA2A-201ENST00000297071 BZW2Q9Y6E2 419 aaKnown RBP21.09■□□□□ 0.97
TRA2A-201ENST00000297071 ARFGEF1Q9Y6D6 1849 aa21.09■□□□□ 0.97
TRA2A-201ENST00000297071 KRT14P02533 472 aa21.08■□□□□ 0.97
TRA2A-201ENST00000297071 RASA1P20936 1047 aa21.08■□□□□ 0.97
TRA2A-201ENST00000297071 RPS8P62241 208 aaKnown RBP21.08■□□□□ 0.97
TRA2A-201ENST00000297071 TDRD12Q587J7 1177 aaKnown RBP21.08■□□□□ 0.97
TRA2A-201ENST00000297071 SPDYCQ5MJ68 293 aa21.08■□□□□ 0.97
TRA2A-201ENST00000297071 AGBL2Q5U5Z8 902 aa21.08■□□□□ 0.97
TRA2A-201ENST00000297071 NLRP14Q86W24 1093 aa21.08■□□□□ 0.97
TRA2A-201ENST00000297071 DZIP1Q86YF9 867 aaKnown RBP21.08■□□□□ 0.97
TRA2A-201ENST00000297071 TRIM59Q8IWR1 403 aa21.08■□□□□ 0.97
TRA2A-201ENST00000297071 MYCBPAPQ8TBZ2 947 aa21.08■□□□□ 0.97
TRA2A-201ENST00000297071 RIOX1Q9H6W3 641 aa21.08■□□□□ 0.97
TRA2A-201ENST00000297071 SEC63Q9UGP8 760 aaKnown RBP21.08■□□□□ 0.97
TRA2A-201ENST00000297071 SNED1Q8TER0 1413 aa21.08■□□□□ 0.97
TRA2A-201ENST00000297071 C10orf71Q711Q0 1435 aa21.08■□□□□ 0.96
TRA2A-201ENST00000297071 CCDC188H7C350 402 aa21.08■□□□□ 0.96
TRA2A-201ENST00000297071 BAG3O95817 575 aa21.08■□□□□ 0.96
TRA2A-201ENST00000297071 FAM153BP0C7A2 387 aa21.08■□□□□ 0.96
TRA2A-201ENST00000297071 MTMR3Q13615 1198 aa21.08■□□□□ 0.96
TRA2A-201ENST00000297071 FAM153CQ494X1 144 aa21.08■□□□□ 0.96
TRA2A-201ENST00000297071 KRT79Q5XKE5 535 aa21.08■□□□□ 0.96
TRA2A-201ENST00000297071 PPP1R18Q6NYC8 613 aa21.08■□□□□ 0.96
TRA2A-201ENST00000297071 PPP4R3CPQ6ZMV5 832 aa21.08■□□□□ 0.96
TRA2A-201ENST00000297071 RUFY4Q6ZNE9 571 aa21.08■□□□□ 0.96
TRA2A-201ENST00000297071 ARMC9Q7Z3E5 817 aa21.08■□□□□ 0.96
TRA2A-201ENST00000297071 EEF2KMTQ96G04 330 aa21.08■□□□□ 0.96
TRA2A-201ENST00000297071 MS4A14Q96JA4 679 aa21.08■□□□□ 0.96
TRA2A-201ENST00000297071 SMARCAL1Q9NZC9 954 aa21.08■□□□□ 0.96
TRA2A-201ENST00000297071 FAM153AQ9UHL3 310 aa21.08■□□□□ 0.96
TRA2A-201ENST00000297071 SAMM50Q9Y512 469 aa21.08■□□□□ 0.96
TRA2A-201ENST00000297071 CAPN7Q9Y6W3 813 aa21.08■□□□□ 0.96
TRA2A-201ENST00000297071 GOLGA6L10A6NI86 522 aa21.07■□□□□ 0.96
TRA2A-201ENST00000297071 BUB1O43683 1085 aa21.07■□□□□ 0.96
TRA2A-201ENST00000297071 LDHCP07864 332 aa21.07■□□□□ 0.96
TRA2A-201ENST00000297071 PAEPP09466 180 aa21.07■□□□□ 0.96
TRA2A-201ENST00000297071 SMTNP53814 917 aa21.07■□□□□ 0.96
TRA2A-201ENST00000297071 ITPK1Q13572 414 aa21.07■□□□□ 0.96
TRA2A-201ENST00000297071 TAF4BQ92750 862 aa21.07■□□□□ 0.96
TRA2A-201ENST00000297071 P3H4Q92791 437 aa21.07■□□□□ 0.96
TRA2A-201ENST00000297071 CELF1Q92879 486 aaKnown RBP21.07■□□□□ 0.96
TRA2A-201ENST00000297071 HPS3Q969F9 1004 aa21.07■□□□□ 0.96
TRA2A-201ENST00000297071 CCT8L2Q96SF2 557 aa21.07■□□□□ 0.96
TRA2A-201ENST00000297071 VCPKMTQ9H867 229 aa21.07■□□□□ 0.96
TRA2A-201ENST00000297071 USP17L3A6NCW0 530 aa21.06■□□□□ 0.96
TRA2A-201ENST00000297071 USP17L4A6NCW7 530 aa21.06■□□□□ 0.96
TRA2A-201ENST00000297071 KLRC1P26715 233 aa21.06■□□□□ 0.96
TRA2A-201ENST00000297071 USP11P51784 963 aa21.06■□□□□ 0.96
TRA2A-201ENST00000297071 ACTN3Q08043 901 aaPredicted RBP21.06■□□□□ 0.96
TRA2A-201ENST00000297071 C3orf67Q6ZVT6 689 aa21.06■□□□□ 0.96
TRA2A-201ENST00000297071 USP17L1Q7RTZ2 530 aa21.06■□□□□ 0.96
TRA2A-201ENST00000297071 PLCD3Q8N3E9 789 aa21.06■□□□□ 0.96
TRA2A-201ENST00000297071 SH2D3CQ8N5H7 860 aa21.06■□□□□ 0.96
TRA2A-201ENST00000297071 DDX12PQ92771 950 aa21.06■□□□□ 0.96
TRA2A-201ENST00000297071 DNAJC19Q96DA6 116 aa21.06■□□□□ 0.96
TRA2A-201ENST00000297071 KRT12Q99456 494 aa21.06■□□□□ 0.96
TRA2A-201ENST00000297071 WTIPA6NIX2 430 aaPredicted RBP21.06■□□□□ 0.96
TRA2A-201ENST00000297071 TXKP42681 527 aa21.06■□□□□ 0.96
TRA2A-201ENST00000297071 C16orf86Q6ZW13 317 aa21.06■□□□□ 0.96
TRA2A-201ENST00000297071 NAP1L4Q99733 375 aaKnown RBP21.06■□□□□ 0.96
TRA2A-201ENST00000297071 NYXQ9GZU5 481 aa21.06■□□□□ 0.96
TRA2A-201ENST00000297071 KDM3AQ9Y4C1 1321 aa21.06■□□□□ 0.96
TRA2A-201ENST00000297071 C5orf60A6NFR6 353 aa21.05■□□□□ 0.96
TRA2A-201ENST00000297071 H0YGN5 161 aa21.05■□□□□ 0.96
TRA2A-201ENST00000297071 COASYQ13057 564 aa21.05■□□□□ 0.96
TRA2A-201ENST00000297071 EDRF1Q3B7T1 1238 aa21.05■□□□□ 0.96
TRA2A-201ENST00000297071 CCDC40Q4G0X9 1142 aa21.05■□□□□ 0.96
TRA2A-201ENST00000297071 ANKRD13CQ8N6S4 541 aa21.05■□□□□ 0.96
TRA2A-201ENST00000297071 IFT81Q8WYA0 676 aa21.05■□□□□ 0.96
TRA2A-201ENST00000297071 DYNLL2Q96FJ2 89 aa21.05■□□□□ 0.96
TRA2A-201ENST00000297071 PSMB7Q99436 277 aa21.05■□□□□ 0.96
TRA2A-201ENST00000297071 LSM14BQ9BX40 385 aaKnown RBP21.05■□□□□ 0.96
TRA2A-201ENST00000297071 NT5C3AQ9H0P0 336 aa21.05■□□□□ 0.96
TRA2A-201ENST00000297071 GANQ9H2C0 597 aa21.05■□□□□ 0.96
TRA2A-201ENST00000297071 INTUQ9ULD6 942 aa21.05■□□□□ 0.96
TRA2A-201ENST00000297071 PLAAQ9Y263 795 aa21.05■□□□□ 0.96
TRA2A-201ENST00000297071 NFS1Q9Y697 457 aa21.05■□□□□ 0.96
TRA2A-201ENST00000297071 PLIN4Q96Q06 1357 aa21.05■□□□□ 0.96
TRA2A-201ENST00000297071 A0A0A6YYK5 440 aaPredicted RBP21.04■□□□□ 0.96
TRA2A-201ENST00000297071 RAD51CO43502 376 aa21.04■□□□□ 0.96
TRA2A-201ENST00000297071 ATP1A2P50993 1020 aa21.04■□□□□ 0.96
TRA2A-201ENST00000297071 RPS6KA1Q15418 735 aa21.04■□□□□ 0.96
TRA2A-201ENST00000297071 ASIC2Q16515 512 aa21.04■□□□□ 0.96
TRA2A-201ENST00000297071 FAM26FQ5R3K3 315 aa21.04■□□□□ 0.96
TRA2A-201ENST00000297071 FBXW10Q5XX13 1052 aa21.04■□□□□ 0.96
TRA2A-201ENST00000297071 TBC1D5Q92609 795 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms