RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 ZNF618Q5T7W0 954 aa29.07■■■□□ 2.24
U2AF1-201ENST00000291552 METTL7BQ6UX53 244 aa29.07■■■□□ 2.24
U2AF1-201ENST00000291552 CYFIP1Q7L576 1253 aa29.07■■■□□ 2.24
U2AF1-201ENST00000291552 CUL5Q93034 780 aa29.07■■■□□ 2.24
U2AF1-201ENST00000291552 SLC12A7Q9Y666 1083 aa29.07■■■□□ 2.24
U2AF1-201ENST00000291552 WDR5P61964 334 aaKnown RBP29.06■■■□□ 2.24
U2AF1-201ENST00000291552 SERINC5Q86VE9 423 aa29.06■■■□□ 2.24
U2AF1-201ENST00000291552 MICU3Q86XE3 530 aa29.06■■■□□ 2.24
U2AF1-201ENST00000291552 RASEFQ8IZ41 740 aa29.06■■■□□ 2.24
U2AF1-201ENST00000291552 FANCBQ8NB91 859 aa29.06■■■□□ 2.24
U2AF1-201ENST00000291552 PPM1EQ8WY54 764 aa29.06■■■□□ 2.24
U2AF1-201ENST00000291552 TCEANC2Q96MN5 208 aa29.06■■■□□ 2.24
U2AF1-201ENST00000291552 GPR20Q99678 358 aa29.06■■■□□ 2.24
U2AF1-201ENST00000291552 H3BRB1 525 aa29.05■■■□□ 2.24
U2AF1-201ENST00000291552 NEDD9Q14511 834 aa29.05■■■□□ 2.24
U2AF1-201ENST00000291552 UBE2SQ16763 222 aa29.05■■■□□ 2.24
U2AF1-201ENST00000291552 CNKSR3Q6P9H4 555 aa29.05■■■□□ 2.24
U2AF1-201ENST00000291552 TMCO2Q7Z6W1 182 aaPredicted RBP29.05■■■□□ 2.24
U2AF1-201ENST00000291552 TRIM50Q86XT4 487 aa29.05■■■□□ 2.24
U2AF1-201ENST00000291552 CCDC82Q8N4S0 544 aa29.05■■■□□ 2.24
U2AF1-201ENST00000291552 TUT1Q9H6E5 874 aaKnown RBP29.05■■■□□ 2.24
U2AF1-201ENST00000291552 CNTNAP5Q8WYK1 1306 aa29.04■■■□□ 2.24
U2AF1-201ENST00000291552 EPOPA6NHQ4 379 aa29.04■■■□□ 2.24
U2AF1-201ENST00000291552 SMIM10L2AP0DMW4 78 aa29.04■■■□□ 2.24
U2AF1-201ENST00000291552 SMIM10L2BP0DMW5 78 aa29.04■■■□□ 2.24
U2AF1-201ENST00000291552 IGFBP4P22692 258 aa29.04■■■□□ 2.24
U2AF1-201ENST00000291552 DEFB103AP81534 67 aa29.04■■■□□ 2.24
U2AF1-201ENST00000291552 EXOSC10Q01780 885 aaKnown RBP29.04■■■□□ 2.24
U2AF1-201ENST00000291552 ADCK5Q3MIX3 580 aa29.04■■■□□ 2.24
U2AF1-201ENST00000291552 XRRA1Q6P2D8 792 aa29.04■■■□□ 2.24
U2AF1-201ENST00000291552 APOA5Q6Q788 366 aa29.04■■■□□ 2.24
U2AF1-201ENST00000291552 SPRED2Q7Z698 418 aa29.04■■■□□ 2.24
U2AF1-201ENST00000291552 SIP14410 1827 aa29.04■■■□□ 2.24
U2AF1-201ENST00000291552 NOP56O00567 594 aaKnown RBP29.03■■■□□ 2.24
U2AF1-201ENST00000291552 PARNO95453 639 aaKnown RBP29.03■■■□□ 2.24
U2AF1-201ENST00000291552 NEK1Q96PY6 1258 aa29.03■■■□□ 2.24
U2AF1-201ENST00000291552 PSTPIP2Q9H939 334 aa29.03■■■□□ 2.24
U2AF1-201ENST00000291552 BRPF3Q9ULD4 1205 aa29.03■■■□□ 2.24
U2AF1-201ENST00000291552 RFXAPO00287 272 aa29.02■■■□□ 2.24
U2AF1-201ENST00000291552 KCNJ6P48051 423 aa29.02■■■□□ 2.24
U2AF1-201ENST00000291552 TAP1Q03518 808 aa29.02■■■□□ 2.24
U2AF1-201ENST00000291552 CCDC85BQ15834 202 aaPredicted RBP29.02■■■□□ 2.24
U2AF1-201ENST00000291552 RNF20Q5VTR2 975 aa29.02■■■□□ 2.24
U2AF1-201ENST00000291552 SENP7Q9BQF6 1050 aa29.02■■■□□ 2.24
U2AF1-201ENST00000291552 CERS4Q9HA82 394 aa29.02■■■□□ 2.24
U2AF1-201ENST00000291552 C17orf102A2RUQ5 167 aa29.01■■■□□ 2.23
U2AF1-201ENST00000291552 CDC45O75419 566 aa29.01■■■□□ 2.23
U2AF1-201ENST00000291552 ITGB5P18084 799 aa29.01■■■□□ 2.23
U2AF1-201ENST00000291552 FUT2Q10981 343 aa29.01■■■□□ 2.23
U2AF1-201ENST00000291552 TSGA10IPQ3SY00 556 aa29.01■■■□□ 2.23
U2AF1-201ENST00000291552 TYW1BQ6NUM6 668 aa29.01■■■□□ 2.23
U2AF1-201ENST00000291552 RNPEPQ9H4A4 650 aa29.01■■■□□ 2.23
U2AF1-201ENST00000291552 NCOR1O75376 2440 aa29.01■■■□□ 2.23
U2AF1-201ENST00000291552 LCHNA4D1U4 455 aa29■■■□□ 2.23
U2AF1-201ENST00000291552 TREHO43280 583 aa29■■■□□ 2.23
U2AF1-201ENST00000291552 ATP9AO75110 1047 aa29■■■□□ 2.23
U2AF1-201ENST00000291552 KCNA2P16389 499 aa29■■■□□ 2.23
U2AF1-201ENST00000291552 SP4Q02446 784 aa29■■■□□ 2.23
U2AF1-201ENST00000291552 WWC2Q6AWC2 1192 aa29■■■□□ 2.23
U2AF1-201ENST00000291552 ATP6V0A1Q93050 837 aa29■■■□□ 2.23
U2AF1-201ENST00000291552 GPRASP2Q96D09 838 aa29■■■□□ 2.23
U2AF1-201ENST00000291552 USP26Q9BXU7 913 aa29■■■□□ 2.23
U2AF1-201ENST00000291552 THPOP40225 353 aa28.99■■■□□ 2.23
U2AF1-201ENST00000291552 MKRN4PQ13434 485 aaPredicted RBP28.99■■■□□ 2.23
U2AF1-201ENST00000291552 DHX32Q7L7V1 743 aaKnown RBP28.99■■■□□ 2.23
U2AF1-201ENST00000291552 HEATR3Q7Z4Q2 680 aa28.99■■■□□ 2.23
U2AF1-201ENST00000291552 NLRX1Q86UT6 975 aa28.99■■■□□ 2.23
U2AF1-201ENST00000291552 OSBPL7Q9BZF2 842 aa28.99■■■□□ 2.23
U2AF1-201ENST00000291552 UBIAD1Q9Y5Z9 338 aa28.99■■■□□ 2.23
U2AF1-201ENST00000291552 UTP14CQ5TAP6 766 aaKnown RBP28.98■■■□□ 2.23
U2AF1-201ENST00000291552 SETD4Q9NVD3 440 aa28.98■■■□□ 2.23
U2AF1-201ENST00000291552 MUC3AQ02505 3323 aa28.98■■■□□ 2.23
U2AF1-201ENST00000291552 ABHD14A-ACY1A0A1B0GW23 586 aa28.97■■■□□ 2.23
U2AF1-201ENST00000291552 TLL1O43897 1013 aa28.97■■■□□ 2.23
U2AF1-201ENST00000291552 LGR5O75473 907 aa28.97■■■□□ 2.23
U2AF1-201ENST00000291552 ADAM17P78536 824 aa28.97■■■□□ 2.23
U2AF1-201ENST00000291552 FAM217BQ9NTX9 383 aaPredicted RBP28.97■■■□□ 2.23
U2AF1-201ENST00000291552 PCDHA6Q9UN73 950 aa28.97■■■□□ 2.23
U2AF1-201ENST00000291552 PCDHA8Q9Y5H6 950 aa28.97■■■□□ 2.23
U2AF1-201ENST00000291552 BRWD1Q9NSI6 2320 aa28.97■■■□□ 2.23
U2AF1-201ENST00000291552 RSPH10B2B2RC85 870 aa28.96■■■□□ 2.23
U2AF1-201ENST00000291552 KIF28PB7ZC32 967 aa28.96■■■□□ 2.23
U2AF1-201ENST00000291552 RSPH10BP0C881 870 aa28.96■■■□□ 2.23
U2AF1-201ENST00000291552 RTN1Q16799 776 aa28.96■■■□□ 2.23
U2AF1-201ENST00000291552 TJAP1Q5JTD0 557 aa28.96■■■□□ 2.23
U2AF1-201ENST00000291552 ARNTL2Q8WYA1 636 aa28.96■■■□□ 2.23
U2AF1-201ENST00000291552 RBM28Q9NW13 759 aaKnown RBP28.96■■■□□ 2.23
U2AF1-201ENST00000291552 THEGQ9P2T0 379 aa28.96■■■□□ 2.23
U2AF1-201ENST00000291552 ZBTB43O43298 467 aa28.95■■■□□ 2.22
U2AF1-201ENST00000291552 GJB5O95377 273 aa28.95■■■□□ 2.22
U2AF1-201ENST00000291552 KRT40Q6A162 431 aa28.95■■■□□ 2.22
U2AF1-201ENST00000291552 SYNE3Q6ZMZ3 975 aa28.95■■■□□ 2.22
U2AF1-201ENST00000291552 LMBR1Q8WVP7 490 aa28.95■■■□□ 2.22
U2AF1-201ENST00000291552 MTCH2Q9Y6C9 303 aa28.95■■■□□ 2.22
U2AF1-201ENST00000291552 EMSYQ7Z589 1322 aa28.94■■■□□ 2.22
U2AF1-201ENST00000291552 XIRP2A4UGR9 3374 aa28.94■■■□□ 2.22
U2AF1-201ENST00000291552 GSTTP1A0A1W2PQM5 241 aa28.94■■■□□ 2.22
U2AF1-201ENST00000291552 SPDYE3A6NKU9 549 aa28.94■■■□□ 2.22
U2AF1-201ENST00000291552 CTSHP09668 335 aa28.94■■■□□ 2.22
U2AF1-201ENST00000291552 CPA1P15085 419 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms