RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 CENPKQ9BS16 269 aa11.63□□□□□ -0.55
PKNOX1-201ENST00000291547 COL4A3BPQ9Y5P4 624 aa11.63□□□□□ -0.55
PKNOX1-201ENST00000291547 SYF2O95926 243 aaKnown RBP11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 CXCR5P32302 372 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 C2orf54Q08AI8 447 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 CASP8Q14790 479 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 AOC3Q16853 763 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 TMEM259Q4ZIN3 620 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 PGBD1Q96JS3 809 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 CYTH2Q99418 400 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 MED10Q9BTT4 135 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 MYOM1P52179 1685 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 COBLO75128 1261 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 PTH1RQ03431 593 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 ARMCX5Q6P1M9 558 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 FANCBQ8NB91 859 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 TFCP2L1Q9NZI6 479 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 PARP3Q9Y6F1 533 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 KDRP35968 1356 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 RASGRF2O14827 1237 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 TNNC2P02585 160 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 ATP5JP18859 108 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 PARP10Q53GL7 1025 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 SGO2Q562F6 1265 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 TRAPPC3LQ5T215 181 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 CCHCR1Q8TD31 782 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 ANAPC5Q9UJX4 755 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 ECEL1O95672 775 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 PTK2Q05397 1052 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 PPARAQ07869 468 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 RBL2Q08999 1139 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 SLC12A1Q13621 1099 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 PTPN21Q16825 1174 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 SYMPKQ92797 1274 aaKnown RBP11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 CEP19Q96LK0 163 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 CLIC4Q9Y696 253 aa11.62□□□□□ -0.55
PKNOX1-201ENST00000291547 A0A1W2PQ27 194 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 A0A1W2PQ64 194 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 A0A1W2PQD8 194 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 TADA3O75528 432 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 TMOD1P28289 359 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 GYS2P54840 703 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 ZNF772Q68DY9 489 aaPredicted RBP11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 CC2D1AQ6P1N0 951 aaPredicted RBP11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 RAB44Q7Z6P3 723 aaPredicted RBP11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 NEK8Q86SG6 692 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 GDAP1Q8TB36 358 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 NEK9Q8TD19 979 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 TGFBRAP1Q8WUH2 860 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 IPO11Q9UI26 975 aaKnown RBP11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 ANGPTL3Q9Y5C1 460 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 SYNJ2BP-COX16A0A087WUM0 186 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 WDR91A4D1P6 747 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 TOM1L1O75674 476 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 PTGDRQ13258 359 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 ART3Q13508 389 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 RFX6Q8HWS3 928 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 RBM17Q96I25 401 aaKnown RBP11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 GSDMAQ96QA5 445 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 COX16Q9P0S2 106 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 SCHIP1Q9P0W5 487 aaPredicted RBP11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 USP17L12C9JPN9 530 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 USP17L21D6R901 530 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 DPCR1Q3MIW9 517 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 XKR9Q5GH70 373 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 NUDCD3Q8IVD9 361 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 ZSWIM6Q9HCJ5 1215 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 FIS1Q9Y3D6 152 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 KNDC1Q76NI1 1749 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 A6NJR5 290 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 CREB3O43889 395 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 FTCDO95954 541 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 CPP00450 1065 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 ABL1P00519 1130 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 DYNC1I2Q13409 638 aaKnown RBP11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 GCKRQ14397 625 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 IQCB1Q15051 598 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 ALS2CLQ60I27 953 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 NUGGCQ68CJ6 796 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 EGFL6Q8IUX8 553 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 CNBD1Q8NA66 436 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 HIPK4Q8NE63 616 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 ACRBPQ8NEB7 543 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 CSRNP1Q96S65 589 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 RNF14Q9UBS8 474 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 GGA1Q9UJY5 639 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 SLC4A7Q9Y6M7 1214 aa11.61□□□□□ -0.55
PKNOX1-201ENST00000291547 MAST3O60307 1309 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 A0A0D9SFI3 127 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 H0Y3Z8 333 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 GSTA4O15217 222 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 TMEM191BP0C7N4 346 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 NCF2P19878 526 aaPredicted RBP11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 CA4P22748 312 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 TCP10Q12799 353 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 GRAMD4Q6IC98 578 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 ZC3H18Q86VM9 953 aaKnown RBP11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 ZBTB8OSQ8IWT0 167 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 HACE1Q8IYU2 909 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 YIPF3Q9GZM5 350 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms