RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 MYL1P05976 194 aa17.48■□□□□ 0.39
SMAD6-201ENST00000288840 IFT20Q8IY31 132 aa17.48■□□□□ 0.39
SMAD6-201ENST00000288840 RTFDC1Q9BY42 306 aaPredicted RBP17.48■□□□□ 0.39
SMAD6-201ENST00000288840 DMGDHQ9UI17 866 aaKnown RBP17.48■□□□□ 0.39
SMAD6-201ENST00000288840 SFR1Q86XK3 245 aa17.47■□□□□ 0.39
SMAD6-201ENST00000288840 TDRD3Q9H7E2 651 aaKnown RBP17.47■□□□□ 0.39
SMAD6-201ENST00000288840 L1RE1Q9UN81 338 aa17.47■□□□□ 0.39
SMAD6-201ENST00000288840 EIF3CLB5ME19 914 aaKnown RBP17.47■□□□□ 0.39
SMAD6-201ENST00000288840 EXOC3O60645 756 aa17.47■□□□□ 0.39
SMAD6-201ENST00000288840 CEP85LQ5SZL2 805 aa17.47■□□□□ 0.39
SMAD6-201ENST00000288840 WDR59Q6PJI9 974 aa17.47■□□□□ 0.39
SMAD6-201ENST00000288840 C16orf86Q6ZW13 317 aa17.47■□□□□ 0.39
SMAD6-201ENST00000288840 KSR1Q8IVT5 923 aa17.47■□□□□ 0.39
SMAD6-201ENST00000288840 SPATA4Q8NEY3 305 aa17.47■□□□□ 0.39
SMAD6-201ENST00000288840 GOLGA5Q8TBA6 731 aa17.47■□□□□ 0.39
SMAD6-201ENST00000288840 EIF3CQ99613 913 aaKnown RBP17.47■□□□□ 0.39
SMAD6-201ENST00000288840 JMJD4Q9H9V9 463 aa17.47■□□□□ 0.39
SMAD6-201ENST00000288840 PPANQ9NQ55 473 aaKnown RBP17.47■□□□□ 0.39
SMAD6-201ENST00000288840 REXO2Q9Y3B8 237 aaKnown RBP17.47■□□□□ 0.39
SMAD6-201ENST00000288840 RRP15Q9Y3B9 282 aaKnown RBP17.47■□□□□ 0.39
SMAD6-201ENST00000288840 MYH2Q9UKX2 1941 aa17.47■□□□□ 0.39
SMAD6-201ENST00000288840 LIG3P49916 1009 aa17.47■□□□□ 0.39
SMAD6-201ENST00000288840 KCNH2Q12809 1159 aa17.47■□□□□ 0.39
SMAD6-201ENST00000288840 MIGA2Q7L4E1 593 aa17.47■□□□□ 0.39
SMAD6-201ENST00000288840 PCIF1Q9H4Z3 704 aa17.47■□□□□ 0.39
SMAD6-201ENST00000288840 HDAC9Q9UKV0 1011 aa17.47■□□□□ 0.39
SMAD6-201ENST00000288840 RPL13P26373 211 aaKnown RBP17.46■□□□□ 0.39
SMAD6-201ENST00000288840 TNNC1P63316 161 aa17.46■□□□□ 0.39
SMAD6-201ENST00000288840 SEPT12Q8IYM1 358 aa17.46■□□□□ 0.39
SMAD6-201ENST00000288840 SH2D3CQ8N5H7 860 aa17.46■□□□□ 0.39
SMAD6-201ENST00000288840 MAGEF1Q9HAY2 307 aa17.46■□□□□ 0.39
SMAD6-201ENST00000288840 ARHGAP20Q9P2F6 1191 aa17.46■□□□□ 0.39
SMAD6-201ENST00000288840 HGSO14964 777 aaPredicted RBP17.46■□□□□ 0.39
SMAD6-201ENST00000288840 ZBTB5O15062 677 aa17.46■□□□□ 0.39
SMAD6-201ENST00000288840 KLRC4O43908 158 aa17.46■□□□□ 0.39
SMAD6-201ENST00000288840 GH2P01242 217 aa17.46■□□□□ 0.39
SMAD6-201ENST00000288840 GPATCH4Q5T3I0 446 aaKnown RBP17.46■□□□□ 0.39
SMAD6-201ENST00000288840 C7orf25Q9BPX7 421 aa17.46■□□□□ 0.39
SMAD6-201ENST00000288840 BRD2P25440 801 aaKnown RBP17.46■□□□□ 0.39
SMAD6-201ENST00000288840 SHROOM1Q2M3G4 852 aaPredicted RBP17.46■□□□□ 0.39
SMAD6-201ENST00000288840 SLC10A5Q5PT55 438 aa17.46■□□□□ 0.39
SMAD6-201ENST00000288840 RPGRIP1Q96KN7 1286 aa17.46■□□□□ 0.39
SMAD6-201ENST00000288840 ABCB5Q2M3G0 1257 aa17.45■□□□□ 0.38
SMAD6-201ENST00000288840 GUF1Q8N442 669 aaKnown RBP17.45■□□□□ 0.38
SMAD6-201ENST00000288840 MED4Q9NPJ6 270 aa17.45■□□□□ 0.38
SMAD6-201ENST00000288840 MARF1Q9Y4F3 1742 aaKnown RBP17.45■□□□□ 0.38
SMAD6-201ENST00000288840 PDE2AO00408 941 aaPredicted RBP17.45■□□□□ 0.38
SMAD6-201ENST00000288840 SETQ01105 290 aaPredicted RBP17.45■□□□□ 0.38
SMAD6-201ENST00000288840 C4orf32Q8N8J7 132 aa17.45■□□□□ 0.38
SMAD6-201ENST00000288840 PBX1P40424 430 aa17.45■□□□□ 0.38
SMAD6-201ENST00000288840 PRPHP41219 470 aa17.45■□□□□ 0.38
SMAD6-201ENST00000288840 LRRC63Q05C16 580 aa17.45■□□□□ 0.38
SMAD6-201ENST00000288840 CSRNP1Q96S65 589 aa17.45■□□□□ 0.38
SMAD6-201ENST00000288840 AMNQ9BXJ7 453 aa17.45■□□□□ 0.38
SMAD6-201ENST00000288840 PCDHAC2Q9Y5I4 1007 aa17.45■□□□□ 0.38
SMAD6-201ENST00000288840 ZSCAN5CA6NGD5 496 aaPredicted RBP17.44■□□□□ 0.38
SMAD6-201ENST00000288840 KRIT1O00522 736 aa17.44■□□□□ 0.38
SMAD6-201ENST00000288840 GAS7O60861 476 aa17.44■□□□□ 0.38
SMAD6-201ENST00000288840 SLC9A1P19634 815 aa17.44■□□□□ 0.38
SMAD6-201ENST00000288840 PDCLQ13371 301 aa17.44■□□□□ 0.38
SMAD6-201ENST00000288840 MKRN4PQ13434 485 aaPredicted RBP17.44■□□□□ 0.38
SMAD6-201ENST00000288840 FOXR1Q6PIV2 292 aa17.44■□□□□ 0.38
SMAD6-201ENST00000288840 RIC8AQ9NPQ8 531 aa17.44■□□□□ 0.38
SMAD6-201ENST00000288840 SNX12Q9UMY4 172 aa17.44■□□□□ 0.38
SMAD6-201ENST00000288840 FRMD4BQ9Y2L6 1034 aa17.44■□□□□ 0.38
SMAD6-201ENST00000288840 GPR75-ASB3A0A0A6YYF3 556 aa17.44■□□□□ 0.38
SMAD6-201ENST00000288840 TNFAIP3P21580 790 aa17.44■□□□□ 0.38
SMAD6-201ENST00000288840 ZNF543Q08ER8 600 aa17.44■□□□□ 0.38
SMAD6-201ENST00000288840 SLC35G1Q2M3R5 365 aa17.44■□□□□ 0.38
SMAD6-201ENST00000288840 CAPS2Q9BXY5 557 aa17.44■□□□□ 0.38
SMAD6-201ENST00000288840 KCNQ5Q9NR82 932 aa17.44■□□□□ 0.38
SMAD6-201ENST00000288840 RABGAP1Q9Y3P9 1069 aa17.44■□□□□ 0.38
SMAD6-201ENST00000288840 LRRC10BA6NIK2 292 aa17.44■□□□□ 0.38
SMAD6-201ENST00000288840 MYO1CO00159 1063 aa17.44■□□□□ 0.38
SMAD6-201ENST00000288840 MYCLP12524 364 aaPredicted RBP17.44■□□□□ 0.38
SMAD6-201ENST00000288840 OGFOD1Q8N543 542 aa17.44■□□□□ 0.38
SMAD6-201ENST00000288840 DNAJC7Q99615 494 aa17.44■□□□□ 0.38
SMAD6-201ENST00000288840 DNAJC5Q9H3Z4 198 aa17.44■□□□□ 0.38
SMAD6-201ENST00000288840 DDX4Q9NQI0 724 aaKnown RBP17.44■□□□□ 0.38
SMAD6-201ENST00000288840 RBM12Q9NTZ6 932 aaKnown RBP17.44■□□□□ 0.38
SMAD6-201ENST00000288840 KDM4FA0A1W2PPD8 638 aa17.43■□□□□ 0.38
SMAD6-201ENST00000288840 CALUO43852 315 aaPredicted RBP17.43■□□□□ 0.38
SMAD6-201ENST00000288840 CDR1P51861 262 aa17.43■□□□□ 0.38
SMAD6-201ENST00000288840 ARHGAP4P98171 946 aa17.43■□□□□ 0.38
SMAD6-201ENST00000288840 TRAPPC11Q7Z392 1133 aa17.43■□□□□ 0.38
SMAD6-201ENST00000288840 ZNF526Q8TF50 670 aaPredicted RBP17.43■□□□□ 0.38
SMAD6-201ENST00000288840 PACSIN1Q9BY11 444 aa17.43■□□□□ 0.38
SMAD6-201ENST00000288840 GCNT4Q9P109 453 aa17.43■□□□□ 0.38
SMAD6-201ENST00000288840 TUBGCP6Q96RT7 1819 aa17.43■□□□□ 0.38
SMAD6-201ENST00000288840 KDM3AQ9Y4C1 1321 aa17.43■□□□□ 0.38
SMAD6-201ENST00000288840 ARHGEF35A5YM69 484 aa17.43■□□□□ 0.38
SMAD6-201ENST00000288840 IFI16Q16666 785 aaKnown RBP17.43■□□□□ 0.38
SMAD6-201ENST00000288840 GJB7Q6PEY0 223 aa17.43■□□□□ 0.38
SMAD6-201ENST00000288840 FAM178BQ8IXR5 827 aa17.43■□□□□ 0.38
SMAD6-201ENST00000288840 CCDC127Q96BQ5 260 aa17.43■□□□□ 0.38
SMAD6-201ENST00000288840 CCDC169A6NNP5 214 aa17.43■□□□□ 0.38
SMAD6-201ENST00000288840 F5H6K3 240 aa17.43■□□□□ 0.38
SMAD6-201ENST00000288840 FLOT1O75955 427 aa17.43■□□□□ 0.38
SMAD6-201ENST00000288840 KRT14P02533 472 aa17.43■□□□□ 0.38
SMAD6-201ENST00000288840 IRX5P78411 483 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms