RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 KRT5P13647 590 aa13.71□□□□□ -0.21
SLC6A1-201ENST00000287766 ATP5DP30049 168 aa13.71□□□□□ -0.21
SLC6A1-201ENST00000287766 STK4Q13043 487 aa13.71□□□□□ -0.21
SLC6A1-201ENST00000287766 NKX1-1Q15270 411 aaPredicted RBP13.71□□□□□ -0.21
SLC6A1-201ENST00000287766 ARHGEF1Q92888 912 aaKnown RBP13.71□□□□□ -0.21
SLC6A1-201ENST00000287766 ZNF512BQ96KM6 892 aaPredicted RBP13.71□□□□□ -0.21
SLC6A1-201ENST00000287766 SLIT1O75093 1534 aa13.71□□□□□ -0.21
SLC6A1-201ENST00000287766 ESYT3A0FGR9 886 aa13.71□□□□□ -0.22
SLC6A1-201ENST00000287766 TCP10L2B9ZVM9 353 aa13.71□□□□□ -0.22
SLC6A1-201ENST00000287766 E9PMD0 336 aa13.71□□□□□ -0.22
SLC6A1-201ENST00000287766 LAD1O00515 517 aa13.71□□□□□ -0.22
SLC6A1-201ENST00000287766 OPHN1O60890 802 aa13.71□□□□□ -0.22
SLC6A1-201ENST00000287766 KRT15P19012 456 aa13.71□□□□□ -0.22
SLC6A1-201ENST00000287766 FYB2Q5VWT5 728 aa13.71□□□□□ -0.22
SLC6A1-201ENST00000287766 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.71□□□□□ -0.22
SLC6A1-201ENST00000287766 KLHL14Q9P2G3 628 aa13.71□□□□□ -0.22
SLC6A1-201ENST00000287766 BAG2O95816 211 aa13.71□□□□□ -0.22
SLC6A1-201ENST00000287766 TTLL1O95922 423 aa13.71□□□□□ -0.22
SLC6A1-201ENST00000287766 GUCY2CP25092 1073 aa13.71□□□□□ -0.22
SLC6A1-201ENST00000287766 GFPT1Q06210 699 aaPredicted RBP13.71□□□□□ -0.22
SLC6A1-201ENST00000287766 MAP7D1Q3KQU3 841 aa13.71□□□□□ -0.22
SLC6A1-201ENST00000287766 CCDC62Q6P9F0 684 aa13.71□□□□□ -0.22
SLC6A1-201ENST00000287766 TXNRD3Q86VQ6 643 aa13.71□□□□□ -0.22
SLC6A1-201ENST00000287766 LRRC53A6NM62 1247 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 KRIT1O00522 736 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 HEXIM1O94992 359 aaKnown RBP13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 GRAPQ13588 217 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 NFIXQ14938 502 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 TMC4Q7Z404 712 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 NOA1Q8NC60 698 aaKnown RBP13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 GRAPLQ8TC17 118 aaPredicted RBP13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 TSNARE1Q96NA8 513 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 TRIM6Q9C030 488 aaPredicted RBP13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 CUEDC2Q9H467 287 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 CD209Q9NNX6 404 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 ANAPC4Q9UJX5 808 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 PCDHA6Q9UN73 950 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 PCDHA8Q9Y5H6 950 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 COMMD10Q9Y6G5 202 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 GAS7O60861 476 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 ACTN3Q08043 901 aaPredicted RBP13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 BIRC2Q13490 618 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 EXOC3L4Q17RC7 722 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 SEL1L2Q5TEA6 688 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 C12orf60Q5U649 245 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 HHATQ5VTY9 493 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 NFRKBQ6P4R8 1299 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 FBXO11Q86XK2 927 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 SMARCAL1Q9NZC9 954 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 PACSIN2Q9UNF0 486 aaPredicted RBP13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 TCRBV5S4A2TA0A5A2 114 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 PPP1R3GB7ZBB8 358 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 PRPF6O94906 941 aaKnown RBP13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 STAT1P42224 750 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 MAP7Q14244 749 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 DENND2CQ68D51 928 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 NSMFQ6X4W1 530 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 C3orf67Q6ZVT6 689 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 RIN2Q8WYP3 895 aaPredicted RBP13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 BARHL2Q9NY43 387 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 COL4A3BPQ9Y5P4 624 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 CNTNAP5Q8WYK1 1306 aa13.7□□□□□ -0.22
SLC6A1-201ENST00000287766 C3P01024 1663 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 LRRN2O75325 713 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 RASGRP2Q7LDG7 609 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 EMILIN3Q9NT22 766 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 A0A087X0B3 334 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 CLRN2A0PK11 232 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 VEGFAP15692 232 aaPredicted RBP13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 TPD52P55327 224 aaPredicted RBP13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 NARFQ9UHQ1 456 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 FAM169AQ9Y6X4 670 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 OVOS2A0A0G2JMS6 1433 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 USP17L10C9JJH3 530 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 BACH1O14867 736 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 PLA2G4BP0C869 781 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 FGFR2P21802 821 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 BMP6P22004 513 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 EVX2Q03828 476 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 DPH6Q7L8W6 267 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 SLC4A9Q96Q91 983 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 MMS19Q96T76 1030 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 NAP1L4Q99733 375 aaKnown RBP13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 L2HGDHQ9H9P8 463 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 A0A0U1RQJ8 604 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 RPS6KA4O75676 772 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 GRM4Q14833 912 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 ASPRV1Q53RT3 343 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 CFAP157Q5JU67 520 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 TTBK2Q6IQ55 1244 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 CCDC105Q8IYK2 499 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 RETREG2Q8NC44 543 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 CCDC127Q96BQ5 260 aa13.69□□□□□ -0.22
SLC6A1-201ENST00000287766 KDM3AQ9Y4C1 1321 aa13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 ORC4O43929 436 aa13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 ECM2O94769 699 aaPredicted RBP13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 ARL1P40616 181 aaPredicted RBP13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 STAT3P40763 770 aa13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 VPS41P49754 854 aa13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 MTMR3Q13615 1198 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms