RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 NGLY1Q96IV0 654 aa17.11■□□□□ 0.33
USP43-201ENST00000285199 SUFUQ9UMX1 484 aa17.11■□□□□ 0.33
USP43-201ENST00000285199 CPDO75976 1380 aa17.11■□□□□ 0.33
USP43-201ENST00000285199 MAP2P11137 1827 aaKnown RBP17.11■□□□□ 0.33
USP43-201ENST00000285199 SETBP1Q9Y6X0 1596 aa17.11■□□□□ 0.33
USP43-201ENST00000285199 RASGRF2O14827 1237 aa17.1■□□□□ 0.33
USP43-201ENST00000285199 SORBS3O60504 671 aa17.1■□□□□ 0.33
USP43-201ENST00000285199 ACTN1P12814 892 aa17.1■□□□□ 0.33
USP43-201ENST00000285199 ZNF18P17022 549 aa17.1■□□□□ 0.33
USP43-201ENST00000285199 CELF4Q9BZC1 486 aaKnown RBP17.1■□□□□ 0.33
USP43-201ENST00000285199 CHORDC1Q9UHD1 332 aaPredicted RBP17.1■□□□□ 0.33
USP43-201ENST00000285199 SART1O43290 800 aaKnown RBP17.1■□□□□ 0.33
USP43-201ENST00000285199 MDH1P40925 334 aaKnown RBP17.1■□□□□ 0.33
USP43-201ENST00000285199 GTF2IP78347 998 aa17.1■□□□□ 0.33
USP43-201ENST00000285199 TAF11Q15544 211 aa17.1■□□□□ 0.33
USP43-201ENST00000285199 TSNAXIP1Q2TAA8 658 aa17.1■□□□□ 0.33
USP43-201ENST00000285199 ZNF746Q6NUN9 644 aaPredicted RBP17.1■□□□□ 0.33
USP43-201ENST00000285199 CPXCR1Q8N123 301 aa17.1■□□□□ 0.33
USP43-201ENST00000285199 ANKRD2Q9GZV1 360 aa17.1■□□□□ 0.33
USP43-201ENST00000285199 ZMYND12Q9H0C1 365 aa17.1■□□□□ 0.33
USP43-201ENST00000285199 XDHP47989 1333 aa17.1■□□□□ 0.33
USP43-201ENST00000285199 ENO4A6NNW6 628 aa17.1■□□□□ 0.33
USP43-201ENST00000285199 SKAP2O75563 359 aaPredicted RBP17.1■□□□□ 0.33
USP43-201ENST00000285199 ATF7P17544 494 aaPredicted RBP17.1■□□□□ 0.33
USP43-201ENST00000285199 DR1Q01658 176 aa17.1■□□□□ 0.33
USP43-201ENST00000285199 ANKRD20A3Q5VUR7 823 aa17.1■□□□□ 0.33
USP43-201ENST00000285199 ARL6IP4Q66PJ3 421 aaKnown RBP17.1■□□□□ 0.33
USP43-201ENST00000285199 PARP9Q8IXQ6 854 aa17.1■□□□□ 0.33
USP43-201ENST00000285199 SPICE1Q8N0Z3 855 aa17.1■□□□□ 0.33
USP43-201ENST00000285199 SPDL1Q96EA4 605 aa17.1■□□□□ 0.33
USP43-201ENST00000285199 TRIM51Q9BSJ1 452 aa17.1■□□□□ 0.33
USP43-201ENST00000285199 PCDHA1Q9Y5I3 950 aa17.1■□□□□ 0.33
USP43-201ENST00000285199 COL15A1P39059 1388 aa17.1■□□□□ 0.33
USP43-201ENST00000285199 MYBL2P10244 700 aa17.1■□□□□ 0.33
USP43-201ENST00000285199 PMS1P54277 932 aaKnown RBP17.1■□□□□ 0.33
USP43-201ENST00000285199 PFKFB3Q16875 520 aaPredicted RBP17.1■□□□□ 0.33
USP43-201ENST00000285199 NT5C3AQ9H0P0 336 aa17.1■□□□□ 0.33
USP43-201ENST00000285199 CEP170BQ9Y4F5 1589 aaPredicted RBP17.1■□□□□ 0.33
USP43-201ENST00000285199 CDHR2Q9BYE9 1310 aa17.09■□□□□ 0.33
USP43-201ENST00000285199 TDP2O95551 362 aa17.09■□□□□ 0.33
USP43-201ENST00000285199 ATP5DP30049 168 aa17.09■□□□□ 0.33
USP43-201ENST00000285199 SCYL3Q8IZE3 742 aa17.09■□□□□ 0.33
USP43-201ENST00000285199 TRIM9Q9C026 710 aa17.09■□□□□ 0.33
USP43-201ENST00000285199 TRIM6Q9C030 488 aaPredicted RBP17.09■□□□□ 0.33
USP43-201ENST00000285199 AZI2Q9H6S1 392 aa17.09■□□□□ 0.33
USP43-201ENST00000285199 CLGNO14967 610 aa17.09■□□□□ 0.33
USP43-201ENST00000285199 TTI1O43156 1089 aa17.09■□□□□ 0.33
USP43-201ENST00000285199 POLE2P56282 527 aa17.09■□□□□ 0.33
USP43-201ENST00000285199 PPP1R21Q6ZMI0 780 aa17.09■□□□□ 0.33
USP43-201ENST00000285199 TRAPPC11Q7Z392 1133 aa17.09■□□□□ 0.33
USP43-201ENST00000285199 KIF2BQ8N4N8 673 aa17.09■□□□□ 0.33
USP43-201ENST00000285199 PPRC1Q5VV67 1664 aaKnown RBP17.09■□□□□ 0.33
USP43-201ENST00000285199 PSMD14O00487 310 aa17.09■□□□□ 0.33
USP43-201ENST00000285199 RAD51CO43502 376 aa17.09■□□□□ 0.33
USP43-201ENST00000285199 KLRC1P26715 233 aa17.09■□□□□ 0.33
USP43-201ENST00000285199 BTDP43251 543 aa17.09■□□□□ 0.33
USP43-201ENST00000285199 PPP2R2AP63151 447 aa17.09■□□□□ 0.33
USP43-201ENST00000285199 KCNH2Q12809 1159 aa17.09■□□□□ 0.33
USP43-201ENST00000285199 GNPTABQ3T906 1256 aa17.09■□□□□ 0.33
USP43-201ENST00000285199 FAM178BQ8IXR5 827 aa17.09■□□□□ 0.33
USP43-201ENST00000285199 WDR66Q8TBY9 1149 aa17.09■□□□□ 0.33
USP43-201ENST00000285199 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.09■□□□□ 0.33
USP43-201ENST00000285199 VIPAS39Q9H9C1 493 aa17.09■□□□□ 0.33
USP43-201ENST00000285199 GAS8O95995 478 aa17.08■□□□□ 0.33
USP43-201ENST00000285199 DLATP10515 647 aaKnown RBP17.08■□□□□ 0.33
USP43-201ENST00000285199 WDR78Q5VTH9 848 aa17.08■□□□□ 0.33
USP43-201ENST00000285199 CTAGE3PQ8IX95 158 aa17.08■□□□□ 0.33
USP43-201ENST00000285199 EPN3Q9H201 632 aa17.08■□□□□ 0.33
USP43-201ENST00000285199 TAF1DQ9H5J8 278 aaPredicted RBP17.08■□□□□ 0.33
USP43-201ENST00000285199 TMOD4Q9NZQ9 345 aa17.08■□□□□ 0.33
USP43-201ENST00000285199 PNMA2Q9UL42 364 aa17.08■□□□□ 0.33
USP43-201ENST00000285199 GNA14O95837 355 aa17.08■□□□□ 0.32
USP43-201ENST00000285199 BCRP11274 1271 aa17.08■□□□□ 0.32
USP43-201ENST00000285199 HERVK_113P62684 666 aa17.08■□□□□ 0.32
USP43-201ENST00000285199 CEP63Q96MT8 703 aa17.08■□□□□ 0.32
USP43-201ENST00000285199 PSMD1Q99460 953 aa17.08■□□□□ 0.32
USP43-201ENST00000285199 TARSL2A2RTX5 802 aaKnown RBP17.08■□□□□ 0.32
USP43-201ENST00000285199 AFPP02771 609 aaKnown RBP17.08■□□□□ 0.32
USP43-201ENST00000285199 SRGNP10124 158 aa17.08■□□□□ 0.32
USP43-201ENST00000285199 ERFEQ4G0M1 354 aa17.08■□□□□ 0.32
USP43-201ENST00000285199 ATP8A2Q9NTI2 1148 aa17.08■□□□□ 0.32
USP43-201ENST00000285199 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.08■□□□□ 0.32
USP43-201ENST00000285199 USP31Q70CQ4 1352 aa17.08■□□□□ 0.32
USP43-201ENST00000285199 RNF225M0QZC1 329 aaPredicted RBP17.07■□□□□ 0.32
USP43-201ENST00000285199 PLCG2P16885 1265 aa17.07■□□□□ 0.32
USP43-201ENST00000285199 NTRK3Q16288 839 aa17.07■□□□□ 0.32
USP43-201ENST00000285199 AP1ARQ63HQ0 302 aa17.07■□□□□ 0.32
USP43-201ENST00000285199 IQCDQ96DY2 449 aa17.07■□□□□ 0.32
USP43-201ENST00000285199 ACTR5Q9H9F9 607 aaPredicted RBP17.07■□□□□ 0.32
USP43-201ENST00000285199 FAM114A2Q9NRY5 505 aa17.07■□□□□ 0.32
USP43-201ENST00000285199 AGTPBP1Q9UPW5 1226 aa17.07■□□□□ 0.32
USP43-201ENST00000285199 NPHP3-ACAD11A0A0J9YXS1 232 aa17.07■□□□□ 0.32
USP43-201ENST00000285199 PDE2AO00408 941 aaPredicted RBP17.07■□□□□ 0.32
USP43-201ENST00000285199 PLA2G4BP0C869 781 aa17.07■□□□□ 0.32
USP43-201ENST00000285199 MYBL1P10243 752 aa17.07■□□□□ 0.32
USP43-201ENST00000285199 HSPA1LP34931 641 aa17.07■□□□□ 0.32
USP43-201ENST00000285199 TMED2Q15363 201 aa17.07■□□□□ 0.32
USP43-201ENST00000285199 RASIP1Q5U651 963 aa17.07■□□□□ 0.32
USP43-201ENST00000285199 FYB2Q5VWT5 728 aa17.07■□□□□ 0.32
USP43-201ENST00000285199 PIGOQ8TEQ8 1089 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms