RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 FMO2Q99518 471 aa9.4□□□□□ -0.91
NIPBL-201ENST00000282516 PRDM1O75626 825 aa9.4□□□□□ -0.91
NIPBL-201ENST00000282516 MESDQ14696 234 aa9.4□□□□□ -0.91
NIPBL-201ENST00000282516 CATSPER1Q8NEC5 780 aa9.4□□□□□ -0.91
NIPBL-201ENST00000282516 EPN1Q9Y6I3 576 aaPredicted RBP9.4□□□□□ -0.91
NIPBL-201ENST00000282516 ZMYM4Q5VZL5 1548 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 HSPA1AP0DMV8 641 aaKnown RBP9.39□□□□□ -0.91
NIPBL-201ENST00000282516 HSPA1BP0DMV9 641 aaKnown RBP9.39□□□□□ -0.91
NIPBL-201ENST00000282516 CIITAP33076 1130 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 RARS2Q5T160 578 aaKnown RBP9.39□□□□□ -0.91
NIPBL-201ENST00000282516 UHMK1Q8TAS1 419 aaKnown RBP9.39□□□□□ -0.91
NIPBL-201ENST00000282516 KCNJ14Q9UNX9 436 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 ETF1P62495 437 aaKnown RBP9.39□□□□□ -0.91
NIPBL-201ENST00000282516 DMTNQ08495 405 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 GJC2Q5T442 439 aaPredicted RBP9.39□□□□□ -0.91
NIPBL-201ENST00000282516 ARHGAP18Q8N392 663 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 ZSCAN10Q96SZ4 725 aaPredicted RBP9.39□□□□□ -0.91
NIPBL-201ENST00000282516 NRBP2Q9NSY0 501 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 PLXNC1O60486 1568 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 RPRD2Q5VT52 1461 aaKnown RBP9.39□□□□□ -0.91
NIPBL-201ENST00000282516 DEAF1O75398 565 aaPredicted RBP9.39□□□□□ -0.91
NIPBL-201ENST00000282516 ZBED1O96006 694 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 SCG2P13521 617 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 CTDSPL2Q05D32 466 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 TJAP1Q5JTD0 557 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 NBPF10Q6P3W6 841 aaKnown RBP9.39□□□□□ -0.91
NIPBL-201ENST00000282516 ICA1LQ8NDH6 482 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 PRG3Q9Y2Y8 225 aaPredicted RBP9.39□□□□□ -0.91
NIPBL-201ENST00000282516 DRP2Q13474 957 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 ARHGEF1Q92888 912 aaKnown RBP9.39□□□□□ -0.91
NIPBL-201ENST00000282516 CDC23Q9UJX2 597 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 WDR47O94967 919 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 CEP55Q53EZ4 464 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 APOBEC2Q9Y235 224 aaKnown RBP9.39□□□□□ -0.91
NIPBL-201ENST00000282516 EPHB1P54762 984 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 AP2B1P63010 937 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 WASHC5Q12768 1159 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 CCDC127Q96BQ5 260 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.39□□□□□ -0.91
NIPBL-201ENST00000282516 CPA1P15085 419 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 EXOC4Q96A65 974 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 ZMYND12Q9H0C1 365 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 CFAP43Q8NDM7 1665 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 PRXQ9BXM0 1461 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 SLC9A1P19634 815 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 CA4P22748 312 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 PPP6R3Q5H9R7 873 aaPredicted RBP9.39□□□□□ -0.91
NIPBL-201ENST00000282516 RNF219Q5W0B1 726 aaPredicted RBP9.39□□□□□ -0.91
NIPBL-201ENST00000282516 KIAA1841Q6NSI8 718 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 SYT2Q8N9I0 419 aaPredicted RBP9.39□□□□□ -0.91
NIPBL-201ENST00000282516 MYL10Q9BUA6 226 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 STMN3Q9NZ72 180 aa9.39□□□□□ -0.91
NIPBL-201ENST00000282516 MED23Q9ULK4 1368 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 DDAH1O94760 285 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 DDIT3P35638 169 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 PLTPP55058 493 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 DR1Q01658 176 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 BTBD6Q96KE9 485 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 STK32BQ9NY57 414 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 MOCS3O95396 460 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 S100A5P33763 92 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 NNTQ13423 1086 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 SPARCL1Q14515 664 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 ODR4Q5SWX8 454 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 TGFBRAP1Q8WUH2 860 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 LRFN2Q9ULH4 789 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 H0Y626 953 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 MYO1DO94832 1006 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 TRIM16O95361 564 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 ARHGEF6Q15052 776 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 SPATA1Q5VX52 437 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 EXT2Q93063 718 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 URB2Q14146 1524 aaKnown RBP9.38□□□□□ -0.91
NIPBL-201ENST00000282516 ATXN8OSP0DMR3 200 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 PYGMP11217 842 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 PPARAQ07869 468 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 NAA35Q5VZE5 725 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 SPATA17Q96L03 361 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 MRPS26Q9BYN8 205 aaKnown RBP9.38□□□□□ -0.91
NIPBL-201ENST00000282516 PPARGC1AQ9UBK2 798 aaKnown RBP9.38□□□□□ -0.91
NIPBL-201ENST00000282516 GYG2O15488 501 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 ZSCAN9O15535 394 aaPredicted RBP9.38□□□□□ -0.91
NIPBL-201ENST00000282516 MMS22LQ6ZRQ5 1243 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 PLBD2Q8NHP8 589 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 FAM149B1Q96BN6 582 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 DHTKD1Q96HY7 919 aaPredicted RBP9.38□□□□□ -0.91
NIPBL-201ENST00000282516 RMDN2Q96LZ7 410 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 HNRNPRO43390 633 aaKnown RBP9.38□□□□□ -0.91
NIPBL-201ENST00000282516 HABP4Q5JVS0 413 aaKnown RBP9.38□□□□□ -0.91
NIPBL-201ENST00000282516 ZNF654Q8IZM8 581 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 LPIN2Q92539 896 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 CYTH2Q99418 400 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 METTL22Q9BUU2 404 aaPredicted RBP9.38□□□□□ -0.91
NIPBL-201ENST00000282516 ZFP69BQ9UJL9 534 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 FNDC3AQ9Y2H6 1198 aaKnown RBP9.38□□□□□ -0.91
NIPBL-201ENST00000282516 DUOX2Q9NRD8 1548 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 KRT38O76015 456 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 SMARCA1P28370 1054 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 TMPRSS15P98073 1019 aa9.38□□□□□ -0.91
NIPBL-201ENST00000282516 RNF139Q8WU17 664 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms