RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 ZBED2Q9BTP6 218 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 SLITRK6Q9H5Y7 841 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 BCL2L12Q9HB09 334 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 HOMER3Q9NSC5 361 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 OPHN1O60890 802 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 GAP43P17677 238 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 SPDYE1Q8NFV5 336 aaPredicted RBP12.88□□□□□ -0.35
SHPRH-201ENST00000275233 PIGOQ8TEQ8 1089 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 RNF26Q9BY78 433 aaPredicted RBP12.88□□□□□ -0.35
SHPRH-201ENST00000275233 PLCG1P19174 1290 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 ANXA13P27216 316 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 TMED2Q15363 201 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 ARHGEF25Q86VW2 580 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 CFAP61Q8NHU2 1237 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 WDR11Q9BZH6 1224 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 SLC12A6Q9UHW9 1150 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 BAG5Q9UL15 447 aa12.88□□□□□ -0.35
SHPRH-201ENST00000275233 NPC1L1Q9UHC9 1359 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 GOLGA8KD6RF30 607 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 PLA2G4BP0C869 781 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 SRGAP2BP0DMP2 458 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 CYP2D6P10635 497 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 BBS5Q8N3I7 341 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 RPF1Q9H9Y2 349 aaKnown RBP12.87□□□□□ -0.35
SHPRH-201ENST00000275233 POLD4Q9HCU8 107 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 G3BP2Q9UN86 482 aaKnown RBP12.87□□□□□ -0.35
SHPRH-201ENST00000275233 PCDHB6Q9Y5E3 794 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 CAPN7Q9Y6W3 813 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 PLEKHA8P1O95397 391 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 GH2P01242 217 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 BPIFB4P59827 614 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 HLFQ16534 295 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 DNAJC24Q6P3W2 148 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 C11orf57Q6ZUT1 292 aaPredicted RBP12.87□□□□□ -0.35
SHPRH-201ENST00000275233 SIX6OS1Q8N1H7 587 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 RMDN2Q96LZ7 410 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 RGS12O14924 1447 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 PSDA5PKW4 1024 aaPredicted RBP12.87□□□□□ -0.35
SHPRH-201ENST00000275233 MMP1P03956 469 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 RASSF2P50749 326 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 DBN1Q16643 649 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 RWDD4Q6NW29 188 aaKnown RBP12.87□□□□□ -0.35
SHPRH-201ENST00000275233 BANK1Q8NDB2 785 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 SNAP23O00161 211 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 SH2B2O14492 632 aaPredicted RBP12.87□□□□□ -0.35
SHPRH-201ENST00000275233 PPP6R2O75170 966 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 ZNF853P0CG23 659 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 PEX3P56589 373 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 CCDC38Q502W7 563 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 ZNF394Q53GI3 561 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 PPP1R13BQ96KQ4 1090 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 CPVLQ9H3G5 476 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 LMCD1Q9NZU5 365 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 PNMA2Q9UL42 364 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 LAD1O00515 517 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 SASH1O94885 1247 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 HEXIM1O94992 359 aaKnown RBP12.87□□□□□ -0.35
SHPRH-201ENST00000275233 TCP1P17987 556 aaKnown RBP12.87□□□□□ -0.35
SHPRH-201ENST00000275233 ZNF658Q5TYW1 1059 aaPredicted RBP12.87□□□□□ -0.35
SHPRH-201ENST00000275233 ARHGEF18Q6ZSZ5 1173 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.87□□□□□ -0.35
SHPRH-201ENST00000275233 RAVER2Q9HCJ3 691 aaKnown RBP12.87□□□□□ -0.35
SHPRH-201ENST00000275233 DNAJC17Q9NVM6 304 aaKnown RBP12.87□□□□□ -0.35
SHPRH-201ENST00000275233 MOSPD1Q9UJG1 213 aa12.87□□□□□ -0.35
SHPRH-201ENST00000275233 MCF2LO15068 1137 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 GPC4O75487 556 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 ZBTB7AO95365 584 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 RAB44Q7Z6P3 723 aaPredicted RBP12.86□□□□□ -0.35
SHPRH-201ENST00000275233 EXT2Q93063 718 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 LRGUKQ96M69 825 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 CAPS2Q9BXY5 557 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 PPFIA4O75335 1185 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 NPR1P16066 1061 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 MYO1EQ12965 1108 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 GRAPQ13588 217 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 SLC39A14Q15043 492 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 ZKSCAN8Q15776 578 aaPredicted RBP12.86□□□□□ -0.35
SHPRH-201ENST00000275233 FAM83BQ5T0W9 1011 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 TTLL6Q8N841 843 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 ACRBPQ8NEB7 543 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 GRAPLQ8TC17 118 aaPredicted RBP12.86□□□□□ -0.35
SHPRH-201ENST00000275233 RNF139Q8WU17 664 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 MSTO1Q9BUK6 570 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 WDR91A4D1P6 747 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 GOLGA8CPA6NN73 597 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 SEC31AO94979 1220 aaKnown RBP12.86□□□□□ -0.35
SHPRH-201ENST00000275233 ELF1P32519 619 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 SLCO1A2P46721 670 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 EPHB1P54762 984 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 ASPHQ12797 758 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 THOC5Q13769 683 aaKnown RBP12.86□□□□□ -0.35
SHPRH-201ENST00000275233 RASGRF1Q13972 1273 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 RNF207Q6ZRF8 634 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 RPGRIP1Q96KN7 1286 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 EFCAB8A8MWE9 144 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 NVLO15381 856 aaKnown RBP12.86□□□□□ -0.35
SHPRH-201ENST00000275233 ARL4AP40617 200 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 PLTPP55058 493 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 ADGBQ8N7X0 1667 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 ABCC12Q96J65 1359 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms