RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 CFBP00751 764 aa27.87■■■□□ 2.05
SSBP4-201ENST00000270061 SMPD1P17405 629 aa27.87■■■□□ 2.05
SSBP4-201ENST00000270061 EDNRBP24530 442 aa27.87■■■□□ 2.05
SSBP4-201ENST00000270061 IRX5P78411 483 aaPredicted RBP27.87■■■□□ 2.05
SSBP4-201ENST00000270061 CCSAPQ6IQ19 270 aaPredicted RBP27.87■■■□□ 2.05
SSBP4-201ENST00000270061 TLK2Q86UE8 772 aa27.87■■■□□ 2.05
SSBP4-201ENST00000270061 LAMA3Q16787 3333 aa27.86■■■□□ 2.05
SSBP4-201ENST00000270061 FAM237AA0A1B0GTK4 181 aa27.86■■■□□ 2.05
SSBP4-201ENST00000270061 FAM205CA6NFA0 338 aa27.86■■■□□ 2.05
SSBP4-201ENST00000270061 XRCC6P12956 609 aaKnown RBP eCLIP27.86■■■□□ 2.05
SSBP4-201ENST00000270061 GNA11P29992 359 aa27.86■■■□□ 2.05
SSBP4-201ENST00000270061 C1orf53Q5VUE5 145 aa27.86■■■□□ 2.05
SSBP4-201ENST00000270061 FMR1NBQ8N0W7 255 aaPredicted RBP27.86■■■□□ 2.05
SSBP4-201ENST00000270061 TSPY26PQ9H489 355 aa27.86■■■□□ 2.05
SSBP4-201ENST00000270061 COL20A1Q9P218 1284 aa27.86■■■□□ 2.05
SSBP4-201ENST00000270061 NAPAP54920 295 aa27.86■■■□□ 2.05
SSBP4-201ENST00000270061 KRI1Q8N9T8 703 aaKnown RBP27.86■■■□□ 2.05
SSBP4-201ENST00000270061 NSUN6Q8TEA1 469 aaKnown RBP27.86■■■□□ 2.05
SSBP4-201ENST00000270061 TAAR1Q96RJ0 339 aa27.86■■■□□ 2.05
SSBP4-201ENST00000270061 AP5M1Q9H0R1 490 aa27.86■■■□□ 2.05
SSBP4-201ENST00000270061 TNMDQ9H2S6 317 aa27.86■■■□□ 2.05
SSBP4-201ENST00000270061 C6orf50Q9HD87 102 aa27.86■■■□□ 2.05
SSBP4-201ENST00000270061 STARD7Q9NQZ5 370 aa27.86■■■□□ 2.05
SSBP4-201ENST00000270061 OPLAHO14841 1288 aa27.85■■■□□ 2.05
SSBP4-201ENST00000270061 CTAGE5O15320 804 aa27.85■■■□□ 2.05
SSBP4-201ENST00000270061 NKX3-2P78367 333 aa27.85■■■□□ 2.05
SSBP4-201ENST00000270061 TRIM60Q495X7 471 aa27.85■■■□□ 2.05
SSBP4-201ENST00000270061 RMDN3Q96TC7 470 aa27.85■■■□□ 2.05
SSBP4-201ENST00000270061 FUCA2Q9BTY2 467 aa27.85■■■□□ 2.05
SSBP4-201ENST00000270061 WDR11Q9BZH6 1224 aa27.85■■■□□ 2.05
SSBP4-201ENST00000270061 ASGR1P07306 291 aa27.84■■■□□ 2.05
SSBP4-201ENST00000270061 PPP1R18Q6NYC8 613 aa27.84■■■□□ 2.05
SSBP4-201ENST00000270061 PIK3AP1Q6ZUJ8 805 aa27.84■■■□□ 2.05
SSBP4-201ENST00000270061 GLT1D1Q96MS3 346 aa27.84■■■□□ 2.05
SSBP4-201ENST00000270061 PRO3102Q9H379 93 aa27.84■■■□□ 2.05
SSBP4-201ENST00000270061 MAP3K20Q9NYL2 800 aaKnown RBP27.84■■■□□ 2.05
SSBP4-201ENST00000270061 PCDHA6Q9UN73 950 aa27.84■■■□□ 2.05
SSBP4-201ENST00000270061 Q9Y3F1 56 aa27.84■■■□□ 2.05
SSBP4-201ENST00000270061 PCDHA8Q9Y5H6 950 aa27.84■■■□□ 2.05
SSBP4-201ENST00000270061 ADAMTS3O15072 1205 aa27.83■■■□□ 2.05
SSBP4-201ENST00000270061 DYNC1LI2O43237 492 aaPredicted RBP27.83■■■□□ 2.05
SSBP4-201ENST00000270061 HSD17B4P51659 736 aa27.83■■■□□ 2.05
SSBP4-201ENST00000270061 GHRHRQ02643 423 aa27.83■■■□□ 2.05
SSBP4-201ENST00000270061 DUSP28Q4G0W2 176 aa27.83■■■□□ 2.05
SSBP4-201ENST00000270061 TTC38Q5R3I4 469 aa27.83■■■□□ 2.05
SSBP4-201ENST00000270061 ZNF579Q8NAF0 562 aaKnown RBP27.83■■■□□ 2.05
SSBP4-201ENST00000270061 PRKAG2Q9UGJ0 569 aa27.83■■■□□ 2.05
SSBP4-201ENST00000270061 FBXO2Q9UK22 296 aaPredicted RBP27.83■■■□□ 2.05
SSBP4-201ENST00000270061 SRPRBQ9Y5M8 271 aaKnown RBP27.83■■■□□ 2.05
SSBP4-201ENST00000270061 A0A1B0GVL5 298 aa27.83■■■□□ 2.05
SSBP4-201ENST00000270061 SMCO2A6NFE2 343 aa27.83■■■□□ 2.05
SSBP4-201ENST00000270061 BEX3Q00994 111 aa27.83■■■□□ 2.05
SSBP4-201ENST00000270061 TMEM63BQ5T3F8 832 aa27.83■■■□□ 2.05
SSBP4-201ENST00000270061 RESP18Q5W5W9 173 aa27.83■■■□□ 2.05
SSBP4-201ENST00000270061 SAMD3Q8N6K7 520 aa27.83■■■□□ 2.05
SSBP4-201ENST00000270061 IWS1Q96ST2 819 aa27.83■■■□□ 2.05
SSBP4-201ENST00000270061 GDF15Q99988 308 aa27.83■■■□□ 2.05
SSBP4-201ENST00000270061 RBM47A0AV96 593 aaKnown RBP27.82■■■□□ 2.04
SSBP4-201ENST00000270061 KINO60870 393 aaKnown RBP27.82■■■□□ 2.04
SSBP4-201ENST00000270061 PTGS1P23219 599 aa27.82■■■□□ 2.04
SSBP4-201ENST00000270061 NDUFA8P51970 172 aa27.82■■■□□ 2.04
SSBP4-201ENST00000270061 FSCN1Q16658 493 aaKnown RBP27.82■■■□□ 2.04
SSBP4-201ENST00000270061 ARHGEF16Q5VV41 709 aa27.82■■■□□ 2.04
SSBP4-201ENST00000270061 SHC4Q6S5L8 630 aa27.82■■■□□ 2.04
SSBP4-201ENST00000270061 RBSNQ9H1K0 784 aa27.82■■■□□ 2.04
SSBP4-201ENST00000270061 HPSEQ9Y251 543 aa27.82■■■□□ 2.04
SSBP4-201ENST00000270061 MAGEA10P43363 369 aaPredicted RBP27.81■■■□□ 2.04
SSBP4-201ENST00000270061 CAMK4Q16566 473 aa27.81■■■□□ 2.04
SSBP4-201ENST00000270061 SCFD2Q8WU76 684 aa27.81■■■□□ 2.04
SSBP4-201ENST00000270061 CCDC194A0A1B0GVG4 234 aa27.81■■■□□ 2.04
SSBP4-201ENST00000270061 ATP2B1P20020 1258 aa27.81■■■□□ 2.04
SSBP4-201ENST00000270061 VTI1AQ96AJ9 217 aa27.81■■■□□ 2.04
SSBP4-201ENST00000270061 PFKFB1P16118 471 aa27.8■■■□□ 2.04
SSBP4-201ENST00000270061 EIF2AK2P19525 551 aaKnown RBP27.8■■■□□ 2.04
SSBP4-201ENST00000270061 TLE2Q04725 743 aa27.8■■■□□ 2.04
SSBP4-201ENST00000270061 STXBP2Q15833 593 aa27.8■■■□□ 2.04
SSBP4-201ENST00000270061 PXMP2Q9NR77 195 aa27.8■■■□□ 2.04
SSBP4-201ENST00000270061 LTBP2Q14767 1821 aa27.79■■■□□ 2.04
SSBP4-201ENST00000270061 GCOM1H8Y6P7 765 aaPredicted RBP27.79■■■□□ 2.04
SSBP4-201ENST00000270061 ZEB2O60315 1214 aa27.79■■■□□ 2.04
SSBP4-201ENST00000270061 POLR2MP0CAP2 368 aa27.79■■■□□ 2.04
SSBP4-201ENST00000270061 HOXA13P31271 388 aaPredicted RBP27.79■■■□□ 2.04
SSBP4-201ENST00000270061 KRT25Q7Z3Z0 450 aa27.79■■■□□ 2.04
SSBP4-201ENST00000270061 TIGD1Q96MW7 591 aa27.79■■■□□ 2.04
SSBP4-201ENST00000270061 CLIC6Q96NY7 704 aa27.79■■■□□ 2.04
SSBP4-201ENST00000270061 PRDM5Q9NQX1 630 aaPredicted RBP27.79■■■□□ 2.04
SSBP4-201ENST00000270061 PCDH10Q9P2E7 1040 aa27.79■■■□□ 2.04
SSBP4-201ENST00000270061 SZT2Q5T011 3432 aa27.79■■■□□ 2.04
SSBP4-201ENST00000270061 PQBP1O60828 265 aaKnown RBP27.78■■■□□ 2.04
SSBP4-201ENST00000270061 CCDC192P0DO97 292 aa27.78■■■□□ 2.04
SSBP4-201ENST00000270061 BMP8BP34820 402 aa27.78■■■□□ 2.04
SSBP4-201ENST00000270061 ATP2C1P98194 919 aaPredicted RBP27.78■■■□□ 2.04
SSBP4-201ENST00000270061 WNT7AO00755 349 aa27.78■■■□□ 2.04
SSBP4-201ENST00000270061 NKRFO15226 690 aaKnown RBP eCLIP27.78■■■□□ 2.042e-6■□□□□ 10.9
SSBP4-201ENST00000270061 TTLL4Q14679 1199 aa27.78■■■□□ 2.04
SSBP4-201ENST00000270061 ZNF174Q15697 407 aa27.78■■■□□ 2.04
SSBP4-201ENST00000270061 RASGRP4Q8TDF6 673 aa27.78■■■□□ 2.04
SSBP4-201ENST00000270061 MYH7BA7E2Y1 1941 aa27.78■■■□□ 2.04
SSBP4-201ENST00000270061 A0A1W2PPC1 479 aa27.77■■■□□ 2.04
SSBP4-201ENST00000270061 ZNF202O95125 648 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms