RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 RASSF7Q02833 373 aa21.11■□□□□ 0.97
CPNE7-201ENST00000268720 SEPT2Q15019 361 aa21.11■□□□□ 0.97
CPNE7-201ENST00000268720 PPP1R18Q6NYC8 613 aa21.11■□□□□ 0.97
CPNE7-201ENST00000268720 P2RX7Q99572 595 aaKnown RBP21.11■□□□□ 0.97
CPNE7-201ENST00000268720 PCDHA1Q9Y5I3 950 aa21.11■□□□□ 0.97
CPNE7-201ENST00000268720 MEIS1O00470 390 aa21.1■□□□□ 0.97
CPNE7-201ENST00000268720 MEA1Q16626 185 aa21.1■□□□□ 0.97
CPNE7-201ENST00000268720 TMEM119Q4V9L6 283 aa21.1■□□□□ 0.97
CPNE7-201ENST00000268720 TDRD12Q587J7 1177 aaKnown RBP21.1■□□□□ 0.97
CPNE7-201ENST00000268720 LEKR1Q6ZMV7 388 aa21.1■□□□□ 0.97
CPNE7-201ENST00000268720 IFIH1Q9BYX4 1025 aaKnown RBP21.1■□□□□ 0.97
CPNE7-201ENST00000268720 GBP3Q9H0R5 595 aa21.1■□□□□ 0.97
CPNE7-201ENST00000268720 EHD4Q9H223 541 aa21.1■□□□□ 0.97
CPNE7-201ENST00000268720 PVALEFA0A1B0GWK0 134 aa21.1■□□□□ 0.97
CPNE7-201ENST00000268720 ZSCAN5CA6NGD5 496 aaPredicted RBP21.1■□□□□ 0.97
CPNE7-201ENST00000268720 AKR1B10O60218 316 aa21.1■□□□□ 0.97
CPNE7-201ENST00000268720 IPO7O95373 1038 aaKnown RBP21.1■□□□□ 0.97
CPNE7-201ENST00000268720 CERKLQ49MI3 558 aaPredicted RBP21.1■□□□□ 0.97
CPNE7-201ENST00000268720 COBLL1Q53SF7 1204 aa21.1■□□□□ 0.97
CPNE7-201ENST00000268720 TMX4Q9H1E5 349 aaPredicted RBP21.1■□□□□ 0.97
CPNE7-201ENST00000268720 NDST4Q9H3R1 872 aa21.1■□□□□ 0.97
CPNE7-201ENST00000268720 DMGDHQ9UI17 866 aaKnown RBP21.1■□□□□ 0.97
CPNE7-201ENST00000268720 ATF5Q9Y2D1 282 aaPredicted RBP21.1■□□□□ 0.97
CPNE7-201ENST00000268720 SCN9AQ15858 1988 aa21.09■□□□□ 0.97
CPNE7-201ENST00000268720 ESYT3A0FGR9 886 aa21.09■□□□□ 0.97
CPNE7-201ENST00000268720 GDF11O95390 407 aa21.09■□□□□ 0.97
CPNE7-201ENST00000268720 WDR93Q6P2C0 686 aa21.09■□□□□ 0.97
CPNE7-201ENST00000268720 GREB1LQ9C091 1923 aaPredicted RBP21.09■□□□□ 0.97
CPNE7-201ENST00000268720 KRT86O43790 486 aa21.09■□□□□ 0.97
CPNE7-201ENST00000268720 RNF40O75150 1001 aa21.09■□□□□ 0.97
CPNE7-201ENST00000268720 APBA3O96018 575 aa21.09■□□□□ 0.97
CPNE7-201ENST00000268720 EHHADHQ08426 723 aa21.09■□□□□ 0.97
CPNE7-201ENST00000268720 DACT2Q5SW24 774 aa21.09■□□□□ 0.97
CPNE7-201ENST00000268720 FAM114A1Q8IWE2 563 aa21.09■□□□□ 0.97
CPNE7-201ENST00000268720 DNAJC19Q96DA6 116 aa21.09■□□□□ 0.97
CPNE7-201ENST00000268720 CCDC17Q96LX7 622 aa21.09■□□□□ 0.97
CPNE7-201ENST00000268720 SYF2O95926 243 aaKnown RBP21.08■□□□□ 0.97
CPNE7-201ENST00000268720 KIF11P52732 1056 aa21.08■□□□□ 0.97
CPNE7-201ENST00000268720 JAG1P78504 1218 aa21.08■□□□□ 0.97
CPNE7-201ENST00000268720 SLFN13Q68D06 897 aa21.08■□□□□ 0.97
CPNE7-201ENST00000268720 GUF1Q8N442 669 aaKnown RBP21.08■□□□□ 0.97
CPNE7-201ENST00000268720 SECISBP2LQ93073 1101 aaKnown RBP21.08■□□□□ 0.97
CPNE7-201ENST00000268720 ERGIC2Q96RQ1 377 aa21.08■□□□□ 0.97
CPNE7-201ENST00000268720 LRRC1Q9BTT6 524 aa21.08■□□□□ 0.97
CPNE7-201ENST00000268720 SIPA1L1O43166 1804 aa21.08■□□□□ 0.96
CPNE7-201ENST00000268720 MYO1CO00159 1063 aa21.08■□□□□ 0.96
CPNE7-201ENST00000268720 CYLC1P35663 651 aaPredicted RBP21.08■□□□□ 0.96
CPNE7-201ENST00000268720 KRT83P78385 493 aa21.08■□□□□ 0.96
CPNE7-201ENST00000268720 ZBED6P86452 979 aa21.08■□□□□ 0.96
CPNE7-201ENST00000268720 KIF5AQ12840 1032 aa21.08■□□□□ 0.96
CPNE7-201ENST00000268720 CDC37Q16543 378 aaPredicted RBP21.08■□□□□ 0.96
CPNE7-201ENST00000268720 PAPD7Q5XG87 772 aaKnown RBP21.08■□□□□ 0.96
CPNE7-201ENST00000268720 FAM71BQ8TC56 605 aa21.08■□□□□ 0.96
CPNE7-201ENST00000268720 POTEB3A0JP26 581 aa21.07■□□□□ 0.96
CPNE7-201ENST00000268720 POTECB2RU33 542 aa21.07■□□□□ 0.96
CPNE7-201ENST00000268720 ECE2O60344 883 aa21.07■□□□□ 0.96
CPNE7-201ENST00000268720 TUBB4BP68371 445 aa21.07■□□□□ 0.96
CPNE7-201ENST00000268720 VWA3BQ502W6 1294 aa21.07■□□□□ 0.96
CPNE7-201ENST00000268720 POTEBQ6S5H4 581 aa21.07■□□□□ 0.96
CPNE7-201ENST00000268720 PI4KBQ9UBF8 816 aa21.07■□□□□ 0.96
CPNE7-201ENST00000268720 TRAF5O00463 557 aa21.07■□□□□ 0.96
CPNE7-201ENST00000268720 CHRNA5P30532 468 aa21.07■□□□□ 0.96
CPNE7-201ENST00000268720 PPP1R2P41236 205 aa21.07■□□□□ 0.96
CPNE7-201ENST00000268720 KIAA1024Q9UPX6 916 aa21.07■□□□□ 0.96
CPNE7-201ENST00000268720 PCDHA13Q9Y5I0 950 aa21.07■□□□□ 0.96
CPNE7-201ENST00000268720 MEIS2O14770 477 aa21.06■□□□□ 0.96
CPNE7-201ENST00000268720 FTCDO95954 541 aa21.06■□□□□ 0.96
CPNE7-201ENST00000268720 GGCXP38435 758 aa21.06■□□□□ 0.96
CPNE7-201ENST00000268720 SPA17Q15506 151 aa21.06■□□□□ 0.96
CPNE7-201ENST00000268720 LRRC55Q6ZSA7 311 aa21.06■□□□□ 0.96
CPNE7-201ENST00000268720 ANO3Q9BYT9 981 aa21.06■□□□□ 0.96
CPNE7-201ENST00000268720 HPCAL4Q9UM19 191 aa21.06■□□□□ 0.96
CPNE7-201ENST00000268720 BCS1LQ9Y276 419 aa21.06■□□□□ 0.96
CPNE7-201ENST00000268720 COASYQ13057 564 aa21.06■□□□□ 0.96
CPNE7-201ENST00000268720 STRIP1Q5VSL9 837 aa21.06■□□□□ 0.96
CPNE7-201ENST00000268720 MKL1Q969V6 931 aa21.06■□□□□ 0.96
CPNE7-201ENST00000268720 NUP58Q9BVL2 599 aa21.06■□□□□ 0.96
CPNE7-201ENST00000268720 PACSIN1Q9BY11 444 aa21.06■□□□□ 0.96
CPNE7-201ENST00000268720 TDRD3Q9H7E2 651 aaKnown RBP21.06■□□□□ 0.96
CPNE7-201ENST00000268720 SIK3Q9Y2K2 1263 aa21.06■□□□□ 0.96
CPNE7-201ENST00000268720 RRP15Q9Y3B9 282 aaKnown RBP21.06■□□□□ 0.96
CPNE7-201ENST00000268720 F5H6K3 240 aa21.05■□□□□ 0.96
CPNE7-201ENST00000268720 ACTN1P12814 892 aa21.05■□□□□ 0.96
CPNE7-201ENST00000268720 ICA1Q05084 483 aa21.05■□□□□ 0.96
CPNE7-201ENST00000268720 KLRC3Q07444 240 aa21.05■□□□□ 0.96
CPNE7-201ENST00000268720 TRADDQ15628 312 aa21.05■□□□□ 0.96
CPNE7-201ENST00000268720 USH1GQ495M9 461 aa21.05■□□□□ 0.96
CPNE7-201ENST00000268720 CACNA2D4Q7Z3S7 1137 aa21.05■□□□□ 0.96
CPNE7-201ENST00000268720 RETREG2Q8NC44 543 aa21.05■□□□□ 0.96
CPNE7-201ENST00000268720 DHX36Q9H2U1 1008 aaKnown RBP21.05■□□□□ 0.96
CPNE7-201ENST00000268720 CWC15Q9P013 229 aaKnown RBP21.05■□□□□ 0.96
CPNE7-201ENST00000268720 C10orf71Q711Q0 1435 aa21.05■□□□□ 0.96
CPNE7-201ENST00000268720 LRRC31Q6UY01 552 aa21.05■□□□□ 0.96
CPNE7-201ENST00000268720 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.05■□□□□ 0.96
CPNE7-201ENST00000268720 IDI2Q9BXS1 227 aa21.05■□□□□ 0.96
CPNE7-201ENST00000268720 NYAP2Q9P242 653 aa21.05■□□□□ 0.96
CPNE7-201ENST00000268720 ARFGEF1Q9Y6D6 1849 aa21.05■□□□□ 0.96
CPNE7-201ENST00000268720 RRP1BQ14684 758 aaKnown RBP21.04■□□□□ 0.96
CPNE7-201ENST00000268720 AOC3Q16853 763 aa21.04■□□□□ 0.96
CPNE7-201ENST00000268720 RSPH14Q9UHP6 348 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms