RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 SOX10P56693 466 aa18.68■□□□□ 0.58
SNRPF-201ENST00000266735 ORC2Q13416 577 aaPredicted RBP18.68■□□□□ 0.58
SNRPF-201ENST00000266735 RILPL1Q5EBL4 403 aa18.68■□□□□ 0.58
SNRPF-201ENST00000266735 GNASQ5JWF2 1037 aa18.68■□□□□ 0.58
SNRPF-201ENST00000266735 CYFIP1Q7L576 1253 aa18.68■□□□□ 0.58
SNRPF-201ENST00000266735 BRAPQ7Z569 592 aa18.68■□□□□ 0.58
SNRPF-201ENST00000266735 PCSK9Q8NBP7 692 aaKnown RBP18.68■□□□□ 0.58
SNRPF-201ENST00000266735 PPTC7Q8NI37 304 aa18.68■□□□□ 0.58
SNRPF-201ENST00000266735 SPATA33Q96N06 139 aa18.68■□□□□ 0.58
SNRPF-201ENST00000266735 TSEN34Q9BSV6 310 aaKnown RBP18.68■□□□□ 0.58
SNRPF-201ENST00000266735 MYADML2A6NDP7 307 aa18.67■□□□□ 0.58
SNRPF-201ENST00000266735 A6NJR5 290 aa18.67■□□□□ 0.58
SNRPF-201ENST00000266735 MSH4O15457 936 aa18.67■□□□□ 0.58
SNRPF-201ENST00000266735 SLC37A4O43826 429 aa18.67■□□□□ 0.58
SNRPF-201ENST00000266735 ATP2B1P20020 1258 aa18.67■□□□□ 0.58
SNRPF-201ENST00000266735 ITGB3BPQ13352 177 aaPredicted RBP18.67■□□□□ 0.58
SNRPF-201ENST00000266735 CCSAPQ6IQ19 270 aaPredicted RBP18.67■□□□□ 0.58
SNRPF-201ENST00000266735 AFG1LQ8WV93 481 aa18.67■□□□□ 0.58
SNRPF-201ENST00000266735 JPH1Q9HDC5 661 aaPredicted RBP18.67■□□□□ 0.58
SNRPF-201ENST00000266735 TBC1D22BQ9NU19 505 aa18.67■□□□□ 0.58
SNRPF-201ENST00000266735 MOXD2PA6NHM9 499 aa18.66■□□□□ 0.58
SNRPF-201ENST00000266735 NOP56O00567 594 aaKnown RBP18.66■□□□□ 0.58
SNRPF-201ENST00000266735 TBX3O15119 743 aa18.66■□□□□ 0.58
SNRPF-201ENST00000266735 SORBS3O60504 671 aa18.66■□□□□ 0.58
SNRPF-201ENST00000266735 MMP3P08254 477 aa18.66■□□□□ 0.58
SNRPF-201ENST00000266735 BEX3Q00994 111 aa18.66■□□□□ 0.58
SNRPF-201ENST00000266735 TTC38Q5R3I4 469 aa18.66■□□□□ 0.58
SNRPF-201ENST00000266735 FERMT3Q86UX7 667 aa18.66■□□□□ 0.58
SNRPF-201ENST00000266735 ETNPPLQ8TBG4 499 aa18.66■□□□□ 0.58
SNRPF-201ENST00000266735 RIT2Q99578 217 aa18.66■□□□□ 0.58
SNRPF-201ENST00000266735 ZSCAN16Q9H4T2 348 aaPredicted RBP18.66■□□□□ 0.58
SNRPF-201ENST00000266735 KCNMB3Q9NPA1 279 aa18.66■□□□□ 0.58
SNRPF-201ENST00000266735 DAXXQ9UER7 740 aaPredicted RBP18.66■□□□□ 0.58
SNRPF-201ENST00000266735 WNT7AO00755 349 aa18.65■□□□□ 0.58
SNRPF-201ENST00000266735 NEMFO60524 1076 aa18.65■□□□□ 0.58
SNRPF-201ENST00000266735 KPNA6O60684 536 aa18.65■□□□□ 0.58
SNRPF-201ENST00000266735 MNX1P50219 401 aaPredicted RBP18.65■□□□□ 0.58
SNRPF-201ENST00000266735 IRX5P78411 483 aaPredicted RBP18.65■□□□□ 0.58
SNRPF-201ENST00000266735 RESTQ13127 1097 aa18.65■□□□□ 0.58
SNRPF-201ENST00000266735 KCNA10Q16322 511 aa18.65■□□□□ 0.58
SNRPF-201ENST00000266735 HSDL1Q3SXM5 330 aa18.65■□□□□ 0.58
SNRPF-201ENST00000266735 SLC5A5Q92911 643 aa18.65■□□□□ 0.58
SNRPF-201ENST00000266735 FAM20AQ96MK3 541 aa18.65■□□□□ 0.58
SNRPF-201ENST00000266735 BCAS3Q9H6U6 928 aa18.65■□□□□ 0.58
SNRPF-201ENST00000266735 SLC9A2Q9UBY0 812 aa18.65■□□□□ 0.58
SNRPF-201ENST00000266735 TCEAL9Q9UHQ7 104 aa18.65■□□□□ 0.58
SNRPF-201ENST00000266735 BRCA2P51587 3418 aa18.64■□□□□ 0.58
SNRPF-201ENST00000266735 MCM3APO60318 1980 aa18.64■□□□□ 0.57
SNRPF-201ENST00000266735 DHX15O43143 795 aaKnown RBP18.64■□□□□ 0.57
SNRPF-201ENST00000266735 PPFIA4O75335 1185 aa18.64■□□□□ 0.57
SNRPF-201ENST00000266735 ASGR1P07306 291 aa18.64■□□□□ 0.57
SNRPF-201ENST00000266735 HOXD8P13378 290 aaPredicted RBP18.64■□□□□ 0.57
SNRPF-201ENST00000266735 MCM7P33993 719 aa18.64■□□□□ 0.57
SNRPF-201ENST00000266735 TOB1P50616 345 aaPredicted RBP18.64■□□□□ 0.57
SNRPF-201ENST00000266735 DGKDQ16760 1214 aa18.64■□□□□ 0.57
SNRPF-201ENST00000266735 SLFN12Q8IYM2 578 aa18.64■□□□□ 0.57
SNRPF-201ENST00000266735 GPR20Q99678 358 aa18.64■□□□□ 0.57
SNRPF-201ENST00000266735 TSHZ2Q9NRE2 1034 aa18.64■□□□□ 0.57
SNRPF-201ENST00000266735 POLR3EQ9NVU0 708 aa18.64■□□□□ 0.57
SNRPF-201ENST00000266735 PHF24Q9UPV7 400 aa18.64■□□□□ 0.57
SNRPF-201ENST00000266735 MARCH6O60337 910 aa18.63■□□□□ 0.57
SNRPF-201ENST00000266735 GAS7O60861 476 aa18.63■□□□□ 0.57
SNRPF-201ENST00000266735 CABYRO75952 493 aa18.63■□□□□ 0.57
SNRPF-201ENST00000266735 BAG4O95429 457 aaKnown RBP18.63■□□□□ 0.57
SNRPF-201ENST00000266735 ZSCAN22P10073 491 aaPredicted RBP18.63■□□□□ 0.57
SNRPF-201ENST00000266735 ACLYP53396 1101 aa18.63■□□□□ 0.57
SNRPF-201ENST00000266735 KRT76Q01546 638 aa18.63■□□□□ 0.57
SNRPF-201ENST00000266735 SP4Q02446 784 aa18.63■□□□□ 0.57
SNRPF-201ENST00000266735 ZNF174Q15697 407 aa18.63■□□□□ 0.57
SNRPF-201ENST00000266735 CALCRLQ16602 461 aa18.63■□□□□ 0.57
SNRPF-201ENST00000266735 LRCH2Q5VUJ6 765 aa18.63■□□□□ 0.57
SNRPF-201ENST00000266735 NECAB2Q7Z6G3 386 aa18.63■□□□□ 0.57
SNRPF-201ENST00000266735 SEPT1Q8WYJ6 367 aa18.63■□□□□ 0.57
SNRPF-201ENST00000266735 TEKT3Q9BXF9 490 aa18.63■□□□□ 0.57
SNRPF-201ENST00000266735 C11orf49Q9H6J7 331 aa18.63■□□□□ 0.57
SNRPF-201ENST00000266735 DDX39AO00148 427 aaKnown RBP18.62■□□□□ 0.57
SNRPF-201ENST00000266735 PSMD10O75832 226 aa18.62■□□□□ 0.57
SNRPF-201ENST00000266735 MYL3P08590 195 aa18.62■□□□□ 0.57
SNRPF-201ENST00000266735 COL6A1P12109 1028 aa18.62■□□□□ 0.57
SNRPF-201ENST00000266735 PURAQ00577 322 aaKnown RBP18.62■□□□□ 0.57
SNRPF-201ENST00000266735 ZNF746Q6NUN9 644 aaPredicted RBP18.62■□□□□ 0.57
SNRPF-201ENST00000266735 UBE2Q1Q7Z7E8 422 aa18.62■□□□□ 0.57
SNRPF-201ENST00000266735 DIS3LQ8TF46 1054 aaKnown RBP18.62■□□□□ 0.57
SNRPF-201ENST00000266735 HAS1Q92839 578 aa18.62■□□□□ 0.57
SNRPF-201ENST00000266735 PAWRQ96IZ0 340 aaKnown RBP18.62■□□□□ 0.57
SNRPF-201ENST00000266735 GLT1D1Q96MS3 346 aa18.62■□□□□ 0.57
SNRPF-201ENST00000266735 UIMC1Q96RL1 719 aa18.62■□□□□ 0.57
SNRPF-201ENST00000266735 RBM19Q9Y4C8 960 aaKnown RBP18.62■□□□□ 0.57
SNRPF-201ENST00000266735 PCDHB6Q9Y5E3 794 aa18.62■□□□□ 0.57
SNRPF-201ENST00000266735 ELP1O95163 1332 aa18.61■□□□□ 0.57
SNRPF-201ENST00000266735 A0A1W2PQ45 241 aaPredicted RBP18.61■□□□□ 0.57
SNRPF-201ENST00000266735 A0A1W2PQY0 241 aa18.61■□□□□ 0.57
SNRPF-201ENST00000266735 ACTR2P61160 394 aa18.61■□□□□ 0.57
SNRPF-201ENST00000266735 PKP1Q13835 747 aa18.61■□□□□ 0.57
SNRPF-201ENST00000266735 NBR1Q14596 966 aa18.61■□□□□ 0.57
SNRPF-201ENST00000266735 CXCL17Q6UXB2 119 aa18.61■□□□□ 0.57
SNRPF-201ENST00000266735 SMAP1Q8IYB5 467 aaPredicted RBP18.61■□□□□ 0.57
SNRPF-201ENST00000266735 MTMR9Q96QG7 549 aa18.61■□□□□ 0.57
SNRPF-201ENST00000266735 MTG1Q9BT17 334 aaPredicted RBP18.61■□□□□ 0.57
SNRPF-201ENST00000266735 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms