RNA–Protein interactions for RNA: ENST00000265562.4

PTPN23-201, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN23, Length 5,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-201ENST00000265562 POLR2MP0CAP2 368 aa15.12■□□□□ 0.01
PTPN23-201ENST00000265562 PTPREP23469 700 aa15.12■□□□□ 0.01
PTPN23-201ENST00000265562 RPS8P62241 208 aaKnown RBP15.12■□□□□ 0.01
PTPN23-201ENST00000265562 MYO1EQ12965 1108 aa15.12■□□□□ 0.01
PTPN23-201ENST00000265562 DYNC1I2Q13409 638 aaKnown RBP15.12■□□□□ 0.01
PTPN23-201ENST00000265562 SPARCL1Q14515 664 aa15.12■□□□□ 0.01
PTPN23-201ENST00000265562 PROSER3Q2NL68 480 aa15.12■□□□□ 0.01
PTPN23-201ENST00000265562 ARL6IP4Q66PJ3 421 aaKnown RBP15.12■□□□□ 0.01
PTPN23-201ENST00000265562 TMEM60Q9H2L4 133 aa15.12■□□□□ 0.01
PTPN23-201ENST00000265562 EMILIN3Q9NT22 766 aa15.12■□□□□ 0.01
PTPN23-201ENST00000265562 SPAG7O75391 227 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 FOSP01100 380 aaPredicted RBP15.11■□□□□ 0.01
PTPN23-201ENST00000265562 PIK3CAP42336 1068 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 DMP1Q13316 513 aaPredicted RBP15.11■□□□□ 0.01
PTPN23-201ENST00000265562 GRAMD1BQ3KR37 738 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 ATP6V1G3Q96LB4 118 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 CYTH2Q99418 400 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 RIOK1Q9BRS2 568 aaKnown RBP15.11■□□□□ 0.01
PTPN23-201ENST00000265562 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.11■□□□□ 0.01
PTPN23-201ENST00000265562 ABCA5Q8WWZ7 1642 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 CPP00450 1065 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 PLS3P13797 630 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 CACNB1Q02641 598 aaPredicted RBP15.11■□□□□ 0.01
PTPN23-201ENST00000265562 NME8Q8N427 588 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 ANLNQ9NQW6 1124 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 SAMD9Q5K651 1589 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 GYG2O15488 501 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 STX1BP61266 288 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 ZNF579Q8NAF0 562 aaKnown RBP15.11■□□□□ 0.01
PTPN23-201ENST00000265562 ARMC2Q8NEN0 867 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 TBCKQ8TEA7 893 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 MAML1Q92585 1016 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 HDAC11Q96DB2 347 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 CSRNP1Q96S65 589 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 GDAQ9Y2T3 454 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 ERVK-7P63135 1459 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 CFAP73A6NFT4 308 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 ERVV-2B6SEH9 535 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 WDR46O15213 610 aaKnown RBP15.11■□□□□ 0.01
PTPN23-201ENST00000265562 KRT1P04264 644 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 PDCD2Q16342 344 aaPredicted RBP15.11■□□□□ 0.01
PTPN23-201ENST00000265562 TRIML2Q8N7C3 387 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 SERPINI1Q99574 410 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 PUS7LQ9H0K6 701 aaKnown RBP15.11■□□□□ 0.01
PTPN23-201ENST00000265562 DISC1Q9NRI5 854 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 USP40Q9NVE5 1235 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 ZSWIM5Q9P217 1185 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 SNX24Q9Y343 169 aa15.11■□□□□ 0.01
PTPN23-201ENST00000265562 TARSL2A2RTX5 802 aaKnown RBP15.1■□□□□ 0.01
PTPN23-201ENST00000265562 CLIC2O15247 247 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 TOM1L1O75674 476 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 TMOD1P28289 359 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 CAPRIN2Q6IMN6 1127 aaKnown RBP15.1■□□□□ 0.01
PTPN23-201ENST00000265562 POMGNT1Q8WZA1 660 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 PICK1Q9NRD5 415 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 CHGBP05060 677 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 PDHA1P08559 390 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 GCFC2P16383 781 aaKnown RBP15.1■□□□□ 0.01
PTPN23-201ENST00000265562 CUL4BQ13620 913 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 OSBPL9Q96SU4 736 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 MRPL47Q9HD33 250 aaKnown RBP15.1■□□□□ 0.01
PTPN23-201ENST00000265562 THRAP3Q9Y2W1 955 aaKnown RBP15.1■□□□□ 0.01
PTPN23-201ENST00000265562 PCDHB4Q9Y5E5 795 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 PCDHA1Q9Y5I3 950 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 ATG16L1Q676U5 607 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 RSBN1LQ6PCB5 846 aaPredicted RBP15.1■□□□□ 0.01
PTPN23-201ENST00000265562 JDP2Q8WYK2 163 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 FAM167BQ9BTA0 163 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 TRIM55Q9BYV6 548 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 CLASP1Q7Z460 1538 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 UBAP1LF5GYI3 381 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 PPP1R2P3Q6NXS1 205 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 RAPH1Q70E73 1250 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 KRT26Q7Z3Y9 468 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 NCAPGQ9BPX3 1015 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 TRAIPQ9BWF2 469 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 MRPL11Q9Y3B7 192 aaKnown RBP15.1■□□□□ 0.01
PTPN23-201ENST00000265562 LOC102724159A0A0B4J2E5 919 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 ZBTB22O15209 634 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 DEUP1Q05D60 604 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 PWP2Q15269 919 aaKnown RBP15.1■□□□□ 0.01
PTPN23-201ENST00000265562 RHOT2Q8IXI1 618 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 CCDC138Q96M89 665 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 WDR24Q96S15 920 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 UBE2TQ9NPD8 197 aaPredicted RBP15.1■□□□□ 0.01
PTPN23-201ENST00000265562 SMYD2Q9NRG4 433 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 HESX1Q9UBX0 185 aa15.1■□□□□ 0.01
PTPN23-201ENST00000265562 PBRM1Q86U86 1689 aa15.09■□□□□ 0.01
PTPN23-201ENST00000265562 MCF2LO15068 1137 aa15.09■□□□□ 0.01
PTPN23-201ENST00000265562 PHKG2P15735 406 aa15.09■□□□□ 0.01
PTPN23-201ENST00000265562 RWDD2BP57060 319 aa15.09■□□□□ 0.01
PTPN23-201ENST00000265562 VSNL1P62760 191 aa15.09■□□□□ 0.01
PTPN23-201ENST00000265562 BASP1P80723 227 aaKnown RBP15.09■□□□□ 0.01
PTPN23-201ENST00000265562 KCNV2Q8TDN2 545 aa15.09■□□□□ 0.01
PTPN23-201ENST00000265562 GREM2Q9H772 168 aa15.09■□□□□ 0.01
PTPN23-201ENST00000265562 A0A0G2JND7 137 aa15.09■□□□□ 0.01
PTPN23-201ENST00000265562 IPO5O00410 1097 aaKnown RBP15.09■□□□□ 0.01
PTPN23-201ENST00000265562 MFSD14BQ5SR56 506 aa15.09■□□□□ 0.01
PTPN23-201ENST00000265562 FAM47EQ6ZV65 393 aa15.09■□□□□ 0.01
PTPN23-201ENST00000265562 CENPUQ71F23 418 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms