RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 TUT1Q9H6E5 874 aaKnown RBP18.44■□□□□ 0.54
USE1-201ENST00000263897 UBIAD1Q9Y5Z9 338 aa18.44■□□□□ 0.54
USE1-201ENST00000263897 DOCK5Q9H7D0 1870 aa18.43■□□□□ 0.54
USE1-201ENST00000263897 SMCO2A6NFE2 343 aa18.43■□□□□ 0.54
USE1-201ENST00000263897 STXBP3O00186 592 aa18.43■□□□□ 0.54
USE1-201ENST00000263897 MAFGO15525 162 aa18.43■□□□□ 0.54
USE1-201ENST00000263897 LGALS2P05162 132 aa18.43■□□□□ 0.54
USE1-201ENST00000263897 ITGB5P18084 799 aa18.43■□□□□ 0.54
USE1-201ENST00000263897 PTK7Q13308 1070 aa18.43■□□□□ 0.54
USE1-201ENST00000263897 DHX38Q92620 1227 aaKnown RBP18.43■□□□□ 0.54
USE1-201ENST00000263897 CDHR1Q96JP9 859 aa18.43■□□□□ 0.54
USE1-201ENST00000263897 PBX4Q9BYU1 374 aa18.43■□□□□ 0.54
USE1-201ENST00000263897 BARHL2Q9NY43 387 aa18.43■□□□□ 0.54
USE1-201ENST00000263897 TET1Q8NFU7 2136 aa18.43■□□□□ 0.54
USE1-201ENST00000263897 ATP9AO75110 1047 aa18.42■□□□□ 0.54
USE1-201ENST00000263897 FOSP01100 380 aaPredicted RBP18.42■□□□□ 0.54
USE1-201ENST00000263897 PBX2P40425 430 aa18.42■□□□□ 0.54
USE1-201ENST00000263897 ADCY7P51828 1080 aa18.42■□□□□ 0.54
USE1-201ENST00000263897 ZNF200P98182 395 aaPredicted RBP18.42■□□□□ 0.54
USE1-201ENST00000263897 RBL2Q08999 1139 aa18.42■□□□□ 0.54
USE1-201ENST00000263897 HIC1Q14526 733 aa18.42■□□□□ 0.54
USE1-201ENST00000263897 AFAP1L1Q8TED9 768 aa18.42■□□□□ 0.54
USE1-201ENST00000263897 TIFAQ96CG3 184 aa18.42■□□□□ 0.54
USE1-201ENST00000263897 GLT8D2Q9H1C3 349 aa18.42■□□□□ 0.54
USE1-201ENST00000263897 EHMT1Q9H9B1 1298 aa18.42■□□□□ 0.54
USE1-201ENST00000263897 ZSWIM6Q9HCJ5 1215 aa18.42■□□□□ 0.54
USE1-201ENST00000263897 TELO2Q9Y4R8 837 aa18.42■□□□□ 0.54
USE1-201ENST00000263897 SLC4A7Q9Y6M7 1214 aa18.42■□□□□ 0.54
USE1-201ENST00000263897 CKBP12277 381 aa18.41■□□□□ 0.54
USE1-201ENST00000263897 ACTN1P12814 892 aa18.41■□□□□ 0.54
USE1-201ENST00000263897 SELPP16109 830 aa18.41■□□□□ 0.54
USE1-201ENST00000263897 KCNA2P16389 499 aa18.41■□□□□ 0.54
USE1-201ENST00000263897 EVCP57679 992 aa18.41■□□□□ 0.54
USE1-201ENST00000263897 PFKFB3Q16875 520 aaPredicted RBP18.41■□□□□ 0.54
USE1-201ENST00000263897 RUFY3Q7L099 469 aa18.41■□□□□ 0.54
USE1-201ENST00000263897 FTOQ9C0B1 505 aaKnown RBP eCLIP18.41■□□□□ 0.54
USE1-201ENST00000263897 ZNF576Q9H609 170 aa18.41■□□□□ 0.54
USE1-201ENST00000263897 JADE2Q9NQC1 790 aa18.41■□□□□ 0.54
USE1-201ENST00000263897 MSRAQ9UJ68 235 aa18.41■□□□□ 0.54
USE1-201ENST00000263897 ZBBXA8MT70 800 aa18.4■□□□□ 0.54
USE1-201ENST00000263897 PRPF3O43395 683 aaKnown RBP18.4■□□□□ 0.54
USE1-201ENST00000263897 PARNO95453 639 aaKnown RBP18.4■□□□□ 0.54
USE1-201ENST00000263897 SCG2P13521 617 aa18.4■□□□□ 0.54
USE1-201ENST00000263897 MTMR1Q13613 665 aa18.4■□□□□ 0.54
USE1-201ENST00000263897 GPNMBQ14956 572 aa18.4■□□□□ 0.54
USE1-201ENST00000263897 RAB30Q15771 203 aa18.4■□□□□ 0.54
USE1-201ENST00000263897 TRIM71Q2Q1W2 868 aaKnown RBP18.4■□□□□ 0.54
USE1-201ENST00000263897 LRRC8DQ7L1W4 858 aa18.4■□□□□ 0.54
USE1-201ENST00000263897 SLC17A8Q8NDX2 589 aa18.4■□□□□ 0.54
USE1-201ENST00000263897 MXRA8Q9BRK3 442 aa18.4■□□□□ 0.54
USE1-201ENST00000263897 RNPEPQ9H4A4 650 aa18.4■□□□□ 0.54
USE1-201ENST00000263897 NID2Q14112 1375 aa18.4■□□□□ 0.54
USE1-201ENST00000263897 C17orf102A2RUQ5 167 aa18.39■□□□□ 0.53
USE1-201ENST00000263897 SMIM10L2AP0DMW4 78 aa18.39■□□□□ 0.53
USE1-201ENST00000263897 SMIM10L2BP0DMW5 78 aa18.39■□□□□ 0.53
USE1-201ENST00000263897 PDIA3P30101 505 aaKnown RBP18.39■□□□□ 0.53
USE1-201ENST00000263897 HOXC8P31273 242 aa18.39■□□□□ 0.53
USE1-201ENST00000263897 CLK2P49760 499 aaKnown RBP18.39■□□□□ 0.53
USE1-201ENST00000263897 SP4Q02446 784 aa18.39■□□□□ 0.53
USE1-201ENST00000263897 GRIN2CQ14957 1233 aa18.39■□□□□ 0.53
USE1-201ENST00000263897 NTRK3Q16288 839 aa18.39■□□□□ 0.53
USE1-201ENST00000263897 PKN1Q16512 942 aa18.39■□□□□ 0.53
USE1-201ENST00000263897 UTP14CQ5TAP6 766 aaKnown RBP18.39■□□□□ 0.53
USE1-201ENST00000263897 SERINC5Q86VE9 423 aa18.39■□□□□ 0.53
USE1-201ENST00000263897 MYLIPQ8WY64 445 aa18.39■□□□□ 0.53
USE1-201ENST00000263897 SEPT1Q8WYJ6 367 aa18.39■□□□□ 0.53
USE1-201ENST00000263897 TM6SF1Q9BZW5 370 aa18.39■□□□□ 0.53
USE1-201ENST00000263897 CYP46A1Q9Y6A2 500 aa18.39■□□□□ 0.53
USE1-201ENST00000263897 TANC1Q9C0D5 1861 aa18.38■□□□□ 0.53
USE1-201ENST00000263897 GSTTP1A0A1W2PQM5 241 aa18.38■□□□□ 0.53
USE1-201ENST00000263897 ATP2A2P16615 1042 aaKnown RBP18.38■□□□□ 0.53
USE1-201ENST00000263897 AP3B2Q13367 1082 aa18.38■□□□□ 0.53
USE1-201ENST00000263897 TOB2Q14106 344 aaPredicted RBP18.38■□□□□ 0.53
USE1-201ENST00000263897 ZNF618Q5T7W0 954 aa18.38■□□□□ 0.53
USE1-201ENST00000263897 CYP2W1Q8TAV3 490 aa18.38■□□□□ 0.53
USE1-201ENST00000263897 ATP6V0A1Q93050 837 aa18.38■□□□□ 0.53
USE1-201ENST00000263897 WNT8BQ93098 351 aa18.38■□□□□ 0.53
USE1-201ENST00000263897 PGBD1Q96JS3 809 aa18.38■□□□□ 0.53
USE1-201ENST00000263897 ANO3Q9BYT9 981 aa18.38■□□□□ 0.53
USE1-201ENST00000263897 ZMYND12Q9H0C1 365 aa18.38■□□□□ 0.53
USE1-201ENST00000263897 KCNH7Q9NS40 1196 aa18.38■□□□□ 0.53
USE1-201ENST00000263897 TMEM260Q9NX78 707 aa18.38■□□□□ 0.53
USE1-201ENST00000263897 KAT6AQ92794 2004 aa18.38■□□□□ 0.53
USE1-201ENST00000263897 ESYT2A0FGR8 921 aa18.37■□□□□ 0.53
USE1-201ENST00000263897 CXCL10P02778 98 aa18.37■□□□□ 0.53
USE1-201ENST00000263897 IFNAR1P17181 557 aa18.37■□□□□ 0.53
USE1-201ENST00000263897 TCF7P36402 384 aaPredicted RBP18.37■□□□□ 0.53
USE1-201ENST00000263897 SREBF1P36956 1147 aa18.37■□□□□ 0.53
USE1-201ENST00000263897 RABGGTBP53611 331 aa18.37■□□□□ 0.53
USE1-201ENST00000263897 CCT2P78371 535 aaKnown RBP18.37■□□□□ 0.53
USE1-201ENST00000263897 CEP55Q53EZ4 464 aa18.37■□□□□ 0.53
USE1-201ENST00000263897 TRAF7Q6Q0C0 670 aa18.37■□□□□ 0.53
USE1-201ENST00000263897 TRIM50Q86XT4 487 aa18.37■□□□□ 0.53
USE1-201ENST00000263897 PHOSPHO2Q8TCD6 241 aa18.37■□□□□ 0.53
USE1-201ENST00000263897 PHKBQ93100 1093 aa18.37■□□□□ 0.53
USE1-201ENST00000263897 SETD4Q9NVD3 440 aa18.37■□□□□ 0.53
USE1-201ENST00000263897 PKD2L1Q9P0L9 805 aa18.37■□□□□ 0.53
USE1-201ENST00000263897 ZNF215Q9UL58 517 aaPredicted RBP18.37■□□□□ 0.53
USE1-201ENST00000263897 YBX2Q9Y2T7 364 aaKnown RBP18.37■□□□□ 0.53
USE1-201ENST00000263897 PCDHA11Q9Y5I1 949 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms