RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 DHX40Q8IX18 779 aaKnown RBP25.66■■□□□ 1.7
SMARCB1-201ENST00000263121 SMCR8Q8TEV9 937 aaPredicted RBP25.66■■□□□ 1.7
SMARCB1-201ENST00000263121 INPP4AQ96PE3 977 aaPredicted RBP25.66■■□□□ 1.7
SMARCB1-201ENST00000263121 PTPN18Q99952 460 aa25.66■■□□□ 1.7
SMARCB1-201ENST00000263121 C7orf25Q9BPX7 421 aa25.66■■□□□ 1.7
SMARCB1-201ENST00000263121 POLR3CQ9BUI4 534 aaPredicted RBP25.66■■□□□ 1.7
SMARCB1-201ENST00000263121 MROH8Q9H579 483 aa25.66■■□□□ 1.7
SMARCB1-201ENST00000263121 STAM2O75886 525 aa25.65■■□□□ 1.7
SMARCB1-201ENST00000263121 RPN1P04843 607 aaKnown RBP25.65■■□□□ 1.7
SMARCB1-201ENST00000263121 AMPD3Q01432 767 aa25.65■■□□□ 1.7
SMARCB1-201ENST00000263121 MCM6Q14566 821 aa25.65■■□□□ 1.7
SMARCB1-201ENST00000263121 MLKLQ8NB16 471 aa25.65■■□□□ 1.7
SMARCB1-201ENST00000263121 GPRASP2Q96D09 838 aa25.65■■□□□ 1.7
SMARCB1-201ENST00000263121 EIF2AK1Q9BQI3 630 aaKnown RBP25.65■■□□□ 1.7
SMARCB1-201ENST00000263121 TRIM9Q9C026 710 aa25.65■■□□□ 1.7
SMARCB1-201ENST00000263121 UNC45AQ9H3U1 944 aa25.65■■□□□ 1.7
SMARCB1-201ENST00000263121 KIAA1024Q9UPX6 916 aa25.65■■□□□ 1.7
SMARCB1-201ENST00000263121 KIF3CO14782 793 aa25.64■■□□□ 1.7
SMARCB1-201ENST00000263121 ZNF157P51786 506 aaPredicted RBP25.64■■□□□ 1.7
SMARCB1-201ENST00000263121 ITGB3BPQ13352 177 aaPredicted RBP25.64■■□□□ 1.7
SMARCB1-201ENST00000263121 FAM133AQ8N9E0 248 aa25.64■■□□□ 1.7
SMARCB1-201ENST00000263121 POTEB2H3BUK9 544 aa25.64■■□□□ 1.69
SMARCB1-201ENST00000263121 KLRC4O43908 158 aa25.64■■□□□ 1.69
SMARCB1-201ENST00000263121 GCLCP48506 637 aaPredicted RBP25.64■■□□□ 1.69
SMARCB1-201ENST00000263121 ALDH5A1P51649 535 aaPredicted RBP25.64■■□□□ 1.69
SMARCB1-201ENST00000263121 NLRX1Q86UT6 975 aa25.64■■□□□ 1.69
SMARCB1-201ENST00000263121 HSD17B14Q9BPX1 270 aa25.64■■□□□ 1.69
SMARCB1-201ENST00000263121 RMND1Q9NWS8 449 aa25.64■■□□□ 1.69
SMARCB1-201ENST00000263121 MAFGO15525 162 aa25.63■■□□□ 1.69
SMARCB1-201ENST00000263121 RGS20O76081 388 aa25.63■■□□□ 1.69
SMARCB1-201ENST00000263121 SEMA3FQ13275 785 aa25.63■■□□□ 1.69
SMARCB1-201ENST00000263121 KCNB1Q14721 858 aa25.63■■□□□ 1.69
SMARCB1-201ENST00000263121 RGMBQ6NW40 437 aa25.63■■□□□ 1.69
SMARCB1-201ENST00000263121 KCTD17Q8N5Z5 321 aa25.63■■□□□ 1.69
SMARCB1-201ENST00000263121 GPRC5AQ8NFJ5 357 aa25.63■■□□□ 1.69
SMARCB1-201ENST00000263121 TUFT1Q9NNX1 390 aa25.63■■□□□ 1.69
SMARCB1-201ENST00000263121 TBC1D22BQ9NU19 505 aa25.63■■□□□ 1.69
SMARCB1-201ENST00000263121 MORF4L1Q9UBU8 362 aa25.63■■□□□ 1.69
SMARCB1-201ENST00000263121 POTEFA5A3E0 1075 aa25.62■■□□□ 1.69
SMARCB1-201ENST00000263121 SOWAHBA6NEL2 793 aa25.62■■□□□ 1.69
SMARCB1-201ENST00000263121 CHMP2AO43633 222 aa25.62■■□□□ 1.69
SMARCB1-201ENST00000263121 CNNM4Q6P4Q7 775 aa25.62■■□□□ 1.69
SMARCB1-201ENST00000263121 POTEGQ6S5H5 508 aa25.62■■□□□ 1.69
SMARCB1-201ENST00000263121 AOPEPQ8N6M6 819 aa25.62■■□□□ 1.69
SMARCB1-201ENST00000263121 PARK7Q99497 189 aaKnown RBP25.62■■□□□ 1.69
SMARCB1-201ENST00000263121 PKD2L1Q9P0L9 805 aa25.62■■□□□ 1.69
SMARCB1-201ENST00000263121 ADD3Q9UEY8 706 aaKnown RBP25.62■■□□□ 1.69
SMARCB1-201ENST00000263121 DACH1Q9UI36 760 aa25.62■■□□□ 1.69
SMARCB1-201ENST00000263121 DNAJC25-GNG10A0A024R161 153 aa25.61■■□□□ 1.69
SMARCB1-201ENST00000263121 E9PMD0 336 aa25.61■■□□□ 1.69
SMARCB1-201ENST00000263121 EDNRBP24530 442 aa25.61■■□□□ 1.69
SMARCB1-201ENST00000263121 EPHA7Q15375 998 aa25.61■■□□□ 1.69
SMARCB1-201ENST00000263121 ANP32BQ92688 251 aaKnown RBP25.61■■□□□ 1.69
SMARCB1-201ENST00000263121 MMP19Q99542 508 aa25.61■■□□□ 1.69
SMARCB1-201ENST00000263121 LRRC27Q9C0I9 530 aa25.61■■□□□ 1.69
SMARCB1-201ENST00000263121 PORCNQ9H237 461 aa25.61■■□□□ 1.69
SMARCB1-201ENST00000263121 LRRC37A2A6NM11 1700 aa25.61■■□□□ 1.69
SMARCB1-201ENST00000263121 MYMKA6NI61 221 aa25.61■■□□□ 1.69
SMARCB1-201ENST00000263121 BECN2A8MW95 431 aa25.61■■□□□ 1.69
SMARCB1-201ENST00000263121 ATP9AO75110 1047 aa25.61■■□□□ 1.69
SMARCB1-201ENST00000263121 MUTP22033 750 aa25.61■■□□□ 1.69
SMARCB1-201ENST00000263121 CCNA1P78396 465 aa25.61■■□□□ 1.69
SMARCB1-201ENST00000263121 DHX8Q14562 1220 aaKnown RBP25.61■■□□□ 1.69
SMARCB1-201ENST00000263121 RGL1Q9NZL6 768 aa25.61■■□□□ 1.69
SMARCB1-201ENST00000263121 TLL2Q9Y6L7 1015 aa25.61■■□□□ 1.69
SMARCB1-201ENST00000263121 MANSC4A6NHS7 340 aaPredicted RBP25.6■■□□□ 1.69
SMARCB1-201ENST00000263121 GOLGA6L19H0YKK7 550 aa25.6■■□□□ 1.69
SMARCB1-201ENST00000263121 IKBKBO14920 756 aa25.6■■□□□ 1.69
SMARCB1-201ENST00000263121 SLITRK3O94933 977 aa25.6■■□□□ 1.69
SMARCB1-201ENST00000263121 CYP4A11Q02928 519 aa25.6■■□□□ 1.69
SMARCB1-201ENST00000263121 KCTD2Q14681 263 aa25.6■■□□□ 1.69
SMARCB1-201ENST00000263121 STXBP2Q15833 593 aa25.6■■□□□ 1.69
SMARCB1-201ENST00000263121 KMT5BQ4FZB7 885 aa25.6■■□□□ 1.69
SMARCB1-201ENST00000263121 CT47A1Q5JQC4 288 aaPredicted RBP25.6■■□□□ 1.69
SMARCB1-201ENST00000263121 ZNF658Q5TYW1 1059 aaPredicted RBP25.6■■□□□ 1.69
SMARCB1-201ENST00000263121 ANKRD13CQ8N6S4 541 aa25.6■■□□□ 1.69
SMARCB1-201ENST00000263121 SMC1BQ8NDV3 1235 aa25.6■■□□□ 1.69
SMARCB1-201ENST00000263121 DYDC2Q96IM9 177 aa25.6■■□□□ 1.69
SMARCB1-201ENST00000263121 CDHR1Q96JP9 859 aa25.6■■□□□ 1.69
SMARCB1-201ENST00000263121 KIAA1217Q5T5P2 1943 aa25.59■■□□□ 1.69
SMARCB1-201ENST00000263121 DDX39AO00148 427 aaKnown RBP25.59■■□□□ 1.69
SMARCB1-201ENST00000263121 EIF3JO75822 258 aaKnown RBP25.59■■□□□ 1.69
SMARCB1-201ENST00000263121 RHOBTB3O94955 611 aa25.59■■□□□ 1.69
SMARCB1-201ENST00000263121 SLC10A3P09131 477 aa25.59■■□□□ 1.69
SMARCB1-201ENST00000263121 PLA2G4BP0C869 781 aa25.59■■□□□ 1.69
SMARCB1-201ENST00000263121 ASIC1P78348 528 aa25.59■■□□□ 1.69
SMARCB1-201ENST00000263121 FSTL1Q12841 308 aa25.59■■□□□ 1.69
SMARCB1-201ENST00000263121 NCAPHQ15003 741 aa25.59■■□□□ 1.69
SMARCB1-201ENST00000263121 NEK9Q8TD19 979 aa25.59■■□□□ 1.69
SMARCB1-201ENST00000263121 FGD4Q96M96 766 aa25.59■■□□□ 1.69
SMARCB1-201ENST00000263121 EFCC1Q9HA90 598 aa25.59■■□□□ 1.69
SMARCB1-201ENST00000263121 FCER1AP12319 257 aa25.58■■□□□ 1.69
SMARCB1-201ENST00000263121 GNPTABQ3T906 1256 aa25.58■■□□□ 1.69
SMARCB1-201ENST00000263121 ZCCHC17Q9NP64 241 aaKnown RBP25.58■■□□□ 1.69
SMARCB1-201ENST00000263121 DNM3Q9UQ16 869 aa25.58■■□□□ 1.69
SMARCB1-201ENST00000263121 SMTNL1A8MU46 457 aa25.58■■□□□ 1.68
SMARCB1-201ENST00000263121 SPATA31C2B4DYI2 1134 aa25.58■■□□□ 1.68
SMARCB1-201ENST00000263121 AP5Z1O43299 807 aa25.58■■□□□ 1.68
SMARCB1-201ENST00000263121 CD44P16070 742 aaKnown RBP25.58■■□□□ 1.68
SMARCB1-201ENST00000263121 KCNA2P16389 499 aa25.58■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms