RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 CPXCR1Q8N123 301 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 SIKE1Q9BRV8 207 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 VPS16Q9H269 839 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 COPRSQ9NQ92 184 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 MRGBPQ9NV56 204 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.14□□□□□ -0.95
LDB3-201ENST00000263066 BCL9LQ86UU0 1499 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 CARMIL3Q8ND23 1372 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 ESYT3A0FGR9 886 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 BBOX1O75936 387 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 AARSP49588 968 aaKnown RBP eCLIP9.13□□□□□ -0.95
LDB3-201ENST00000263066 RBL2Q08999 1139 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 CBX3Q13185 183 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 KSR1Q8IVT5 923 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 GALNT15Q8N3T1 639 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 MGARPQ8TDB4 240 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 PRCCQ92733 491 aaPredicted RBP9.13□□□□□ -0.95
LDB3-201ENST00000263066 NDNQ99608 321 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 BRIP1Q9BX63 1249 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 NOVA2Q9UNW9 492 aaKnown RBP9.13□□□□□ -0.95
LDB3-201ENST00000263066 SLC4A7Q9Y6M7 1214 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 DISP2A7MBM2 1401 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 PRPF6O94906 941 aaKnown RBP9.13□□□□□ -0.95
LDB3-201ENST00000263066 PDE6AP16499 860 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 CCND1P24385 295 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 MCAMP43121 646 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 CYP26C1Q6V0L0 522 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 CAPN12Q6ZSI9 719 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 SAMD7Q7Z3H4 446 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 BRAPQ7Z569 592 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 CCDC84Q86UT8 332 aaPredicted RBP9.13□□□□□ -0.95
LDB3-201ENST00000263066 ATP11CQ8NB49 1132 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 NLGN2Q8NFZ4 835 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 CABP5Q9NP86 173 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 SERPINA10Q9UK55 444 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 NFU1Q9UMS0 254 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 GDF11O95390 407 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 BTDP43251 543 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 PTH1RQ03431 593 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 RCN2Q14257 317 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 RNF220Q5VTB9 566 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 INTS8Q75QN2 995 aaKnown RBP9.13□□□□□ -0.95
LDB3-201ENST00000263066 TEX9Q8N6V9 391 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 TAF4BQ92750 862 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 MOV10L1Q9BXT6 1211 aaKnown RBP9.13□□□□□ -0.95
LDB3-201ENST00000263066 CARD9Q9H257 536 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 PIDD1Q9HB75 910 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 NCOA5Q9HCD5 579 aaKnown RBP9.13□□□□□ -0.95
LDB3-201ENST00000263066 HOMER2Q9NSB8 354 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 UTP6Q9NYH9 597 aaKnown RBP9.13□□□□□ -0.95
LDB3-201ENST00000263066 RTEL1Q9NZ71 1219 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 RABL2BQ9UNT1 228 aa9.13□□□□□ -0.95
LDB3-201ENST00000263066 SKIP12755 728 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 ATP2B4P23634 1241 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 CDCA2Q69YH5 1023 aaPredicted RBP9.12□□□□□ -0.95
LDB3-201ENST00000263066 KLHL7Q8IXQ5 586 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 STMN2Q93045 179 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 KIFC2Q96AC6 838 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 KAZALD1Q96I82 304 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 CDK5RAP3Q96JB5 506 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 RPS6KC1Q96S38 1066 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 EPB41L5Q9HCM4 733 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 PFDN4Q9NQP4 134 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 FZD1Q9UP38 647 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 KLF18A0A0U1RQI7 1052 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 PTPDC1A2A3K4 754 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 HNRNPRO43390 633 aaKnown RBP9.12□□□□□ -0.95
LDB3-201ENST00000263066 ALOX15P16050 662 aaPredicted RBP9.12□□□□□ -0.95
LDB3-201ENST00000263066 SP4Q02446 784 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 ZNF589Q86UQ0 364 aaPredicted RBP9.12□□□□□ -0.95
LDB3-201ENST00000263066 SLF2Q8IX21 1173 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 UPF1Q92900 1129 aaKnown RBP eCLIP9.12□□□□□ -0.95
LDB3-201ENST00000263066 ZNF653Q96CK0 615 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 DYNLL2Q96FJ2 89 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 ZIM3Q96PE6 472 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 NEK1Q96PY6 1258 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 PUS7LQ9H0K6 701 aaKnown RBP9.12□□□□□ -0.95
LDB3-201ENST00000263066 GPCPD1Q9NPB8 672 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 PIH1D3Q9NQM4 214 aaKnown RBP9.12□□□□□ -0.95
LDB3-201ENST00000263066 MAGEC2Q9UBF1 373 aaPredicted RBP9.12□□□□□ -0.95
LDB3-201ENST00000263066 PLAAQ9Y263 795 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 SLC12A7Q9Y666 1083 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 C5P01031 1676 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 PHLPP1O60346 1717 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 SLURP2P0DP57 97 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 NAT1P18440 290 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 CYP11B2P19099 503 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 KCNA3P22001 575 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 SERPINB3P29508 390 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 CYLC1P35663 651 aaPredicted RBP9.12□□□□□ -0.95
LDB3-201ENST00000263066 KRT83P78385 493 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 SEPT2Q15019 361 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 SOGA3Q5TF21 947 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 WDR93Q6P2C0 686 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 KBTBD3Q8NAB2 608 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 TEKT1Q969V4 418 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 KCND1Q9NSA2 647 aa9.12□□□□□ -0.95
LDB3-201ENST00000263066 SPDYE5A6NIY4 337 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 DNM1LO00429 736 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 ZNF185O15231 689 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms