RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 SSR1P43307 286 aaKnown RBP17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 CTSWP56202 376 aa17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 ELF3P78545 371 aaPredicted RBP17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 AGAP11Q8TF27 550 aa17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 XPO6Q96QU8 1125 aaKnown RBP17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 ABCF3Q9NUQ8 709 aa17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 RBM28Q9NW13 759 aaKnown RBP17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 TSKSQ9UJT2 592 aa17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 NOC2LQ9Y3T9 749 aaKnown RBP17.39■□□□□ 0.37
PRPF40B-201ENST00000261897 A0A1W2PRG0 241 aa17.38■□□□□ 0.37
PRPF40B-201ENST00000261897 STARD3NLO95772 234 aa17.38■□□□□ 0.37
PRPF40B-201ENST00000261897 HOOK3Q86VS8 718 aa17.38■□□□□ 0.37
PRPF40B-201ENST00000261897 STAG1Q8WVM7 1258 aa17.38■□□□□ 0.37
PRPF40B-201ENST00000261897 FGFR1OP2Q9NVK5 253 aa17.38■□□□□ 0.37
PRPF40B-201ENST00000261897 SEC63Q9UGP8 760 aaKnown RBP17.38■□□□□ 0.37
PRPF40B-201ENST00000261897 INTUQ9ULD6 942 aa17.38■□□□□ 0.37
PRPF40B-201ENST00000261897 RASSF9O75901 435 aa17.38■□□□□ 0.37
PRPF40B-201ENST00000261897 PSMD2Q13200 908 aa17.38■□□□□ 0.37
PRPF40B-201ENST00000261897 CARD10Q9BWT7 1032 aa17.38■□□□□ 0.37
PRPF40B-201ENST00000261897 FAM205AQ6ZU69 1335 aa17.38■□□□□ 0.37
PRPF40B-201ENST00000261897 UBOX5O94941 541 aa17.38■□□□□ 0.37
PRPF40B-201ENST00000261897 GNAT2P19087 354 aa17.38■□□□□ 0.37
PRPF40B-201ENST00000261897 TMEM266Q2M3C6 531 aa17.38■□□□□ 0.37
PRPF40B-201ENST00000261897 PPP4R3AQ6IN85 833 aa17.38■□□□□ 0.37
PRPF40B-201ENST00000261897 ZNF444Q8N0Y2 327 aaPredicted RBP17.38■□□□□ 0.37
PRPF40B-201ENST00000261897 ZNF507Q8TCN5 953 aa17.38■□□□□ 0.37
PRPF40B-201ENST00000261897 FBF1Q8TES7 1133 aa17.38■□□□□ 0.37
PRPF40B-201ENST00000261897 CAVIN3Q969G5 261 aa17.38■□□□□ 0.37
PRPF40B-201ENST00000261897 TRIM9Q9C026 710 aa17.38■□□□□ 0.37
PRPF40B-201ENST00000261897 SERPINA10Q9UK55 444 aa17.38■□□□□ 0.37
PRPF40B-201ENST00000261897 TSPY3P0CV98 308 aa17.37■□□□□ 0.37
PRPF40B-201ENST00000261897 TSPY8P0CW00 308 aa17.37■□□□□ 0.37
PRPF40B-201ENST00000261897 GJC1P36383 396 aa17.37■□□□□ 0.37
PRPF40B-201ENST00000261897 MTMR3Q13615 1198 aa17.37■□□□□ 0.37
PRPF40B-201ENST00000261897 EAPPQ56P03 285 aaPredicted RBP17.37■□□□□ 0.37
PRPF40B-201ENST00000261897 TMTC3Q6ZXV5 915 aa17.37■□□□□ 0.37
PRPF40B-201ENST00000261897 INTS8Q75QN2 995 aaKnown RBP17.37■□□□□ 0.37
PRPF40B-201ENST00000261897 TFCP2L1Q9NZI6 479 aa17.37■□□□□ 0.37
PRPF40B-201ENST00000261897 SRCAPQ6ZRS2 3230 aa17.37■□□□□ 0.37
PRPF40B-201ENST00000261897 SHBGP04278 402 aa17.37■□□□□ 0.37
PRPF40B-201ENST00000261897 DDR1Q08345 913 aa17.37■□□□□ 0.37
PRPF40B-201ENST00000261897 PLS1Q14651 629 aa17.37■□□□□ 0.37
PRPF40B-201ENST00000261897 TRIP13Q15645 432 aaPredicted RBP17.37■□□□□ 0.37
PRPF40B-201ENST00000261897 OSBPL1AQ9BXW6 950 aa17.37■□□□□ 0.37
PRPF40B-201ENST00000261897 ASAP1Q9ULH1 1129 aa17.37■□□□□ 0.37
PRPF40B-201ENST00000261897 TBX22Q9Y458 520 aa17.37■□□□□ 0.37
PRPF40B-201ENST00000261897 ARHGAP44Q17R89 818 aa17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 ZCRB1Q8TBF4 217 aaKnown RBP17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 PCDHB13Q9Y5F0 798 aa17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 PLEKHG1Q9ULL1 1385 aa17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 WDR19Q8NEZ3 1342 aa17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 FOXO6A8MYZ6 492 aa17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 TRAPPC3O43617 180 aa17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 CALM1P0DP23 149 aa17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 CALM2P0DP24 149 aa17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 CALM3P0DP25 149 aa17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 IFI35P80217 286 aaPredicted RBP17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 KRT79Q5XKE5 535 aa17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 FBXL16Q8N461 479 aa17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 RDH13Q8NBN7 331 aa17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 PNMA1Q8ND90 353 aa17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 ARHGEF2Q92974 986 aaKnown RBP17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 SHISA4Q96DD7 197 aa17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 DYNLL2Q96FJ2 89 aa17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 TSC22D3Q99576 134 aa17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 NEUROG2Q9H2A3 272 aa17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 TRPC6Q9Y210 931 aa17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 FAM208AQ9UK61 1670 aaKnown RBP17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 ABCC6O95255 1503 aa17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 ANKRD62A6NC57 917 aa17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 OR52Z1P0C646 297 aa17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 RFX8Q6ZV50 586 aa17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 CCDC105Q8IYK2 499 aa17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 USP38Q8NB14 1042 aa17.36■□□□□ 0.37
PRPF40B-201ENST00000261897 USP17L3A6NCW0 530 aa17.35■□□□□ 0.37
PRPF40B-201ENST00000261897 USP17L4A6NCW7 530 aa17.35■□□□□ 0.37
PRPF40B-201ENST00000261897 WTIPA6NIX2 430 aaPredicted RBP17.35■□□□□ 0.37
PRPF40B-201ENST00000261897 TCP11X1B4DZS4 312 aa17.35■□□□□ 0.37
PRPF40B-201ENST00000261897 GRIPAP1Q4V328 841 aa17.35■□□□□ 0.37
PRPF40B-201ENST00000261897 ALKBH5Q6P6C2 394 aaKnown RBP17.35■□□□□ 0.37
PRPF40B-201ENST00000261897 USP17L1Q7RTZ2 530 aa17.35■□□□□ 0.37
PRPF40B-201ENST00000261897 ZBTB38Q8NAP3 1195 aaPredicted RBP17.35■□□□□ 0.37
PRPF40B-201ENST00000261897 GIMAP8Q8ND71 665 aaPredicted RBP17.35■□□□□ 0.37
PRPF40B-201ENST00000261897 ETNK1Q9HBU6 452 aa17.35■□□□□ 0.37
PRPF40B-201ENST00000261897 MEA1Q16626 185 aa17.35■□□□□ 0.37
PRPF40B-201ENST00000261897 TRPM8Q7Z2W7 1104 aa17.35■□□□□ 0.37
PRPF40B-201ENST00000261897 ZMYND12Q9H0C1 365 aa17.35■□□□□ 0.37
PRPF40B-201ENST00000261897 TMOD4Q9NZQ9 345 aa17.35■□□□□ 0.37
PRPF40B-201ENST00000261897 EPB41P11171 864 aaKnown RBP17.35■□□□□ 0.37
PRPF40B-201ENST00000261897 ZNF131P52739 623 aa17.35■□□□□ 0.37
PRPF40B-201ENST00000261897 PDXDC1Q6P996 788 aa17.35■□□□□ 0.37
PRPF40B-201ENST00000261897 FAM228AQ86W67 206 aa17.35■□□□□ 0.37
PRPF40B-201ENST00000261897 SEMA6BQ9H3T3 888 aa17.35■□□□□ 0.37
PRPF40B-201ENST00000261897 ATP6V0A4Q9HBG4 840 aa17.35■□□□□ 0.37
PRPF40B-201ENST00000261897 DAAM1Q9Y4D1 1078 aa17.35■□□□□ 0.37
PRPF40B-201ENST00000261897 SMCO2A6NFE2 343 aa17.34■□□□□ 0.37
PRPF40B-201ENST00000261897 STX2P32856 288 aa17.34■□□□□ 0.37
PRPF40B-201ENST00000261897 IRX1P78414 480 aaPredicted RBP17.34■□□□□ 0.37
PRPF40B-201ENST00000261897 TNIP1Q15025 636 aa17.34■□□□□ 0.37
PRPF40B-201ENST00000261897 MUM1Q2TAK8 710 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms