RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 CRLF3Q8IUI8 442 aa11.6□□□□□ -0.55
SLC6A4-201ENST00000261707 FAM161BQ96MY7 647 aa11.6□□□□□ -0.55
SLC6A4-201ENST00000261707 EPC1Q9H2F5 836 aa11.6□□□□□ -0.55
SLC6A4-201ENST00000261707 RHBDL2Q9NX52 303 aa11.6□□□□□ -0.55
SLC6A4-201ENST00000261707 FIS1Q9Y3D6 152 aa11.6□□□□□ -0.55
SLC6A4-201ENST00000261707 SRGAP2O75044 1071 aa11.6□□□□□ -0.55
SLC6A4-201ENST00000261707 HSPA8P11142 646 aaKnown RBP11.6□□□□□ -0.55
SLC6A4-201ENST00000261707 IGBP1P78318 339 aa11.6□□□□□ -0.55
SLC6A4-201ENST00000261707 DAB2P98082 770 aa11.6□□□□□ -0.55
SLC6A4-201ENST00000261707 SCRN1Q12765 414 aa11.6□□□□□ -0.55
SLC6A4-201ENST00000261707 USH1GQ495M9 461 aa11.6□□□□□ -0.55
SLC6A4-201ENST00000261707 ACBD5Q5T8D3 534 aaPredicted RBP11.6□□□□□ -0.55
SLC6A4-201ENST00000261707 MTIF3Q9H2K0 278 aaKnown RBP11.6□□□□□ -0.55
SLC6A4-201ENST00000261707 DENND2AQ9ULE3 1009 aa11.6□□□□□ -0.55
SLC6A4-201ENST00000261707 ACSL3O95573 720 aa11.6□□□□□ -0.55
SLC6A4-201ENST00000261707 CPP00450 1065 aa11.6□□□□□ -0.55
SLC6A4-201ENST00000261707 EIF4A3P38919 411 aaKnown RBP11.6□□□□□ -0.55
SLC6A4-201ENST00000261707 RFX6Q8HWS3 928 aa11.6□□□□□ -0.55
SLC6A4-201ENST00000261707 TTC1Q99614 292 aa11.6□□□□□ -0.55
SLC6A4-201ENST00000261707 C14orf93Q9H972 538 aaKnown RBP11.6□□□□□ -0.55
SLC6A4-201ENST00000261707 SAMSN1Q9NSI8 373 aaKnown RBP11.6□□□□□ -0.55
SLC6A4-201ENST00000261707 CCDC15Q0P6D6 951 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 TRIP13Q15645 432 aaPredicted RBP11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 CCDC157Q569K6 752 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 RAB44Q7Z6P3 723 aaPredicted RBP11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 XAGE2Q96GT9 111 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 ATP6V1G3Q96LB4 118 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 ING2Q9H160 280 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 NDUFB9Q9Y6M9 179 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 KIF24Q5T7B8 1368 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 BLMP54132 1417 aaPredicted RBP11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 USP27XA6NNY8 438 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 HIBADHP31937 336 aaKnown RBP11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 KLC1Q07866 573 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 SUPT20HL1Q3ZLR7 823 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 TRIM60Q495X7 471 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 CEP55Q53EZ4 464 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 SMYD4Q8IYR2 804 aaPredicted RBP11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 PRPF38AQ8NAV1 312 aaKnown RBP11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 LZTS2Q9BRK4 669 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 METTL14Q9HCE5 456 aaKnown RBP11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 ACEP12821 1306 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 KRT8P05787 483 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 SLC44A4Q53GD3 710 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 MCF2L2Q86YR7 1114 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 MCUQ8NE86 351 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 TBC1D23Q9NUY8 699 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 IQANK1A0A1B0GTG1 560 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 PRDM1O75626 825 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 PLA2G4DQ86XP0 818 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 GIMAP4Q9NUV9 329 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 CHCHD3Q9NX63 227 aaKnown RBP11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 ADCY9O60503 1353 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 KCNA3P22001 575 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 SLC39A14Q15043 492 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 C10orf76Q5T2E6 689 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 ZNF467Q7Z7K2 595 aaPredicted RBP11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 CNKSR1Q969H4 720 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 PNMA2Q9UL42 364 aa11.59□□□□□ -0.55
SLC6A4-201ENST00000261707 P4HA1P13674 534 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 EPN3Q9H201 632 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 MFAP3LO75121 409 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 ACTN1P12814 892 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 KRT4P19013 534 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 KIF11P52732 1056 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 EPM2AIP1Q7L775 607 aaPredicted RBP11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 ZNF473Q8WTR7 871 aaKnown RBP11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 EHD2Q9NZN4 543 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 MAP3K5Q99683 1374 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 SCG2P13521 617 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 KRT27Q7Z3Y8 459 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 CMTR1Q8N1G2 835 aaKnown RBP11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 FBXL13Q8NEE6 735 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 CFAP36Q96G28 342 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 RMDN2Q96LZ7 410 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 TGS1Q96RS0 853 aaKnown RBP11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 CSRNP1Q96S65 589 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 SH3GL2Q99962 352 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 APOL6Q9BWW8 343 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 POLR3EQ9NVU0 708 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 RWDD2AQ9UIY3 292 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 RIMS2Q9UQ26 1411 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 EYA2O00167 538 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 APOA1P02647 267 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 HNRNPH1P31943 449 aaKnown RBP11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 NSFP46459 744 aaKnown RBP11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 CYLC2Q14093 348 aaPredicted RBP11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 ZNF658Q5TYW1 1059 aaPredicted RBP11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 NLRX1Q86UT6 975 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 DHTKD1Q96HY7 919 aaPredicted RBP11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 PAWRQ96IZ0 340 aaKnown RBP11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 AATFQ9NY61 560 aaKnown RBP eCLIP11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 GUCY1A3Q02108 690 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 FAM133AQ8N9E0 248 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 ANKRD7Q92527 254 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 THAP11Q96EK4 314 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 C1orf112Q9NSG2 853 aa11.58□□□□□ -0.56
SLC6A4-201ENST00000261707 SERPING1P05155 500 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 MAPK4P31152 587 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 IREB2P48200 963 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms