RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 LAMB2P55268 1798 aa15.99■□□□□ 0.15
SFSWAP-201ENST00000261674 EPS15P42566 896 aa15.99■□□□□ 0.15
SFSWAP-201ENST00000261674 GNGT1P63211 74 aa15.99■□□□□ 0.15
SFSWAP-201ENST00000261674 RAPGEF1Q13905 1077 aa15.99■□□□□ 0.15
SFSWAP-201ENST00000261674 MAN2A1Q16706 1144 aa15.99■□□□□ 0.15
SFSWAP-201ENST00000261674 DALRD3Q5D0E6 543 aaKnown RBP15.99■□□□□ 0.15
SFSWAP-201ENST00000261674 GALNT17Q6IS24 598 aa15.99■□□□□ 0.15
SFSWAP-201ENST00000261674 CUEDC2Q9H467 287 aa15.99■□□□□ 0.15
SFSWAP-201ENST00000261674 VIPAS39Q9H9C1 493 aa15.99■□□□□ 0.15
SFSWAP-201ENST00000261674 RBM12Q9NTZ6 932 aaKnown RBP15.99■□□□□ 0.15
SFSWAP-201ENST00000261674 HYOU1Q9Y4L1 999 aa15.99■□□□□ 0.15
SFSWAP-201ENST00000261674 CLRN2A0PK11 232 aa15.98■□□□□ 0.15
SFSWAP-201ENST00000261674 TARSL2A2RTX5 802 aaKnown RBP15.98■□□□□ 0.15
SFSWAP-201ENST00000261674 PPFIA4O75335 1185 aa15.98■□□□□ 0.15
SFSWAP-201ENST00000261674 SLC16A2P36021 539 aa15.98■□□□□ 0.15
SFSWAP-201ENST00000261674 PRPHP41219 470 aa15.98■□□□□ 0.15
SFSWAP-201ENST00000261674 CCDC84Q86UT8 332 aaPredicted RBP15.98■□□□□ 0.15
SFSWAP-201ENST00000261674 FHDC1Q9C0D6 1143 aaPredicted RBP15.98■□□□□ 0.15
SFSWAP-201ENST00000261674 BLOC1S4Q9NUP1 217 aa15.98■□□□□ 0.15
SFSWAP-201ENST00000261674 KRT14P02533 472 aa15.98■□□□□ 0.15
SFSWAP-201ENST00000261674 KRT18P05783 430 aaKnown RBP15.98■□□□□ 0.15
SFSWAP-201ENST00000261674 EHHADHQ08426 723 aa15.98■□□□□ 0.15
SFSWAP-201ENST00000261674 ARHGAP27Q6ZUM4 889 aa15.98■□□□□ 0.15
SFSWAP-201ENST00000261674 ARL8AQ96BM9 186 aa15.98■□□□□ 0.15
SFSWAP-201ENST00000261674 TSG101Q99816 390 aa15.98■□□□□ 0.15
SFSWAP-201ENST00000261674 FAM107BQ9H098 131 aa15.98■□□□□ 0.15
SFSWAP-201ENST00000261674 NFU1Q9UMS0 254 aa15.98■□□□□ 0.15
SFSWAP-201ENST00000261674 LIG3P49916 1009 aa15.98■□□□□ 0.15
SFSWAP-201ENST00000261674 GUCY2DQ02846 1103 aa15.98■□□□□ 0.15
SFSWAP-201ENST00000261674 CENPPQ6IPU0 288 aa15.98■□□□□ 0.15
SFSWAP-201ENST00000261674 CERS3Q8IU89 383 aa15.98■□□□□ 0.15
SFSWAP-201ENST00000261674 ZSCAN29Q8IWY8 852 aaPredicted RBP15.98■□□□□ 0.15
SFSWAP-201ENST00000261674 KLHL7Q8IXQ5 586 aa15.98■□□□□ 0.15
SFSWAP-201ENST00000261674 TSEN2Q8NCE0 465 aaKnown RBP15.98■□□□□ 0.15
SFSWAP-201ENST00000261674 GOLPH3Q9H4A6 298 aa15.98■□□□□ 0.15
SFSWAP-201ENST00000261674 EPB41L5Q9HCM4 733 aa15.98■□□□□ 0.15
SFSWAP-201ENST00000261674 CACNA1SQ13698 1873 aa15.97■□□□□ 0.15
SFSWAP-201ENST00000261674 DOCK2Q92608 1830 aa15.97■□□□□ 0.15
SFSWAP-201ENST00000261674 YDJCA8MPS7 323 aa15.97■□□□□ 0.15
SFSWAP-201ENST00000261674 HSF2BPO75031 334 aa15.97■□□□□ 0.15
SFSWAP-201ENST00000261674 LDHCP07864 332 aa15.97■□□□□ 0.15
SFSWAP-201ENST00000261674 HMGB2P26583 209 aaKnown RBP15.97■□□□□ 0.15
SFSWAP-201ENST00000261674 STYK1Q6J9G0 422 aa15.97■□□□□ 0.15
SFSWAP-201ENST00000261674 TBC1D5Q92609 795 aa15.97■□□□□ 0.15
SFSWAP-201ENST00000261674 NOX5Q96PH1 765 aa15.97■□□□□ 0.15
SFSWAP-201ENST00000261674 LSM14BQ9BX40 385 aaKnown RBP15.97■□□□□ 0.15
SFSWAP-201ENST00000261674 CAPS2Q9BXY5 557 aa15.97■□□□□ 0.15
SFSWAP-201ENST00000261674 ZNF287Q9HBT7 754 aa15.97■□□□□ 0.15
SFSWAP-201ENST00000261674 ADAMTS1Q9UHI8 967 aa15.97■□□□□ 0.15
SFSWAP-201ENST00000261674 AARSP49588 968 aaKnown RBP eCLIP15.97■□□□□ 0.15
SFSWAP-201ENST00000261674 SIK3Q9Y2K2 1263 aa15.97■□□□□ 0.15
SFSWAP-201ENST00000261674 ZNF831Q5JPB2 1677 aa15.97■□□□□ 0.15
SFSWAP-201ENST00000261674 SLX4Q8IY92 1834 aa15.97■□□□□ 0.15
SFSWAP-201ENST00000261674 IRS2Q9Y4H2 1338 aa15.97■□□□□ 0.15
SFSWAP-201ENST00000261674 NPHP3-ACAD11A0A0J9YXS1 232 aa15.96■□□□□ 0.15
SFSWAP-201ENST00000261674 MPHOSPH10O00566 681 aaKnown RBP15.96■□□□□ 0.15
SFSWAP-201ENST00000261674 FGFR1OPO95684 399 aaKnown RBP15.96■□□□□ 0.15
SFSWAP-201ENST00000261674 TCP1P17987 556 aaKnown RBP15.96■□□□□ 0.15
SFSWAP-201ENST00000261674 CARSP49589 748 aaKnown RBP15.96■□□□□ 0.15
SFSWAP-201ENST00000261674 IRAK1P51617 712 aa15.96■□□□□ 0.15
SFSWAP-201ENST00000261674 PDCLQ13371 301 aa15.96■□□□□ 0.15
SFSWAP-201ENST00000261674 PNMA5Q96PV4 448 aa15.96■□□□□ 0.15
SFSWAP-201ENST00000261674 STIM2Q9P246 746 aa15.96■□□□□ 0.15
SFSWAP-201ENST00000261674 NOP2P46087 812 aaKnown RBP15.96■□□□□ 0.15
SFSWAP-201ENST00000261674 HLTFQ14527 1009 aaKnown RBP eCLIP15.96■□□□□ 0.153e-7■■■■■ 26.9
SFSWAP-201ENST00000261674 TTC31Q49AM3 519 aaPredicted RBP15.96■□□□□ 0.15
SFSWAP-201ENST00000261674 UNC13DQ70J99 1090 aa15.96■□□□□ 0.15
SFSWAP-201ENST00000261674 KRT12Q99456 494 aa15.96■□□□□ 0.15
SFSWAP-201ENST00000261674 RAB34Q9BZG1 259 aa15.96■□□□□ 0.15
SFSWAP-201ENST00000261674 EBAG9O00559 213 aa15.96■□□□□ 0.14
SFSWAP-201ENST00000261674 PALMO75781 387 aa15.96■□□□□ 0.14
SFSWAP-201ENST00000261674 GSTO1P78417 241 aa15.96■□□□□ 0.14
SFSWAP-201ENST00000261674 HERC4Q5GLZ8 1057 aaPredicted RBP15.96■□□□□ 0.14
SFSWAP-201ENST00000261674 DAGLBQ8NCG7 672 aa15.96■□□□□ 0.14
SFSWAP-201ENST00000261674 SLC16A10Q8TF71 515 aa15.96■□□□□ 0.14
SFSWAP-201ENST00000261674 PTGER2P43116 358 aa15.95■□□□□ 0.14
SFSWAP-201ENST00000261674 ADCY7P51828 1080 aa15.95■□□□□ 0.14
SFSWAP-201ENST00000261674 NFIAQ12857 509 aa15.95■□□□□ 0.14
SFSWAP-201ENST00000261674 KIAA0753Q2KHM9 967 aa15.95■□□□□ 0.14
SFSWAP-201ENST00000261674 SLC9C1Q4G0N8 1177 aa15.95■□□□□ 0.14
SFSWAP-201ENST00000261674 ZFPM1Q8IX07 1006 aa15.95■□□□□ 0.14
SFSWAP-201ENST00000261674 MYOCDQ8IZQ8 938 aa15.95■□□□□ 0.14
SFSWAP-201ENST00000261674 MSL3Q8N5Y2 521 aaKnown RBP15.95■□□□□ 0.14
SFSWAP-201ENST00000261674 C7orf43Q8WVR3 580 aa15.95■□□□□ 0.14
SFSWAP-201ENST00000261674 CCDC43Q96MW1 224 aaKnown RBP15.95■□□□□ 0.14
SFSWAP-201ENST00000261674 TLR10Q9BXR5 811 aa15.95■□□□□ 0.14
SFSWAP-201ENST00000261674 COA1Q9GZY4 146 aa15.95■□□□□ 0.14
SFSWAP-201ENST00000261674 BMP2KQ9NSY1 1161 aaPredicted RBP15.95■□□□□ 0.14
SFSWAP-201ENST00000261674 E9PMD0 336 aa15.95■□□□□ 0.14
SFSWAP-201ENST00000261674 HEXIM1O94992 359 aaKnown RBP15.95■□□□□ 0.14
SFSWAP-201ENST00000261674 TRADDQ15628 312 aa15.95■□□□□ 0.14
SFSWAP-201ENST00000261674 SFMBT2Q5VUG0 894 aa15.95■□□□□ 0.14
SFSWAP-201ENST00000261674 FAM133AQ8N9E0 248 aa15.95■□□□□ 0.14
SFSWAP-201ENST00000261674 LZTS2Q9BRK4 669 aa15.95■□□□□ 0.14
SFSWAP-201ENST00000261674 TDRD3Q9H7E2 651 aaKnown RBP15.95■□□□□ 0.14
SFSWAP-201ENST00000261674 MAGEF1Q9HAY2 307 aa15.95■□□□□ 0.14
SFSWAP-201ENST00000261674 USP40Q9NVE5 1235 aa15.95■□□□□ 0.14
SFSWAP-201ENST00000261674 ZC3H4Q9UPT8 1303 aaKnown RBP15.95■□□□□ 0.14
SFSWAP-201ENST00000261674 GLI1P08151 1106 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 FAM83BQ5T0W9 1011 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms