RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 FAM86B1E9PN63 330 aa19.06■□□□□ 0.64
SDCBP-201ENST00000260130 FAM86B2P0C5J1 330 aa19.06■□□□□ 0.64
SDCBP-201ENST00000260130 USP11P51784 963 aa19.06■□□□□ 0.64
SDCBP-201ENST00000260130 DGKDQ16760 1214 aa19.06■□□□□ 0.64
SDCBP-201ENST00000260130 METTL7BQ6UX53 244 aa19.06■□□□□ 0.64
SDCBP-201ENST00000260130 KRT25Q7Z3Z0 450 aa19.06■□□□□ 0.64
SDCBP-201ENST00000260130 FAM184AQ8NB25 1140 aa19.06■□□□□ 0.64
SDCBP-201ENST00000260130 TBCKQ8TEA7 893 aa19.06■□□□□ 0.64
SDCBP-201ENST00000260130 NR2E3Q9Y5X4 410 aa19.06■□□□□ 0.64
SDCBP-201ENST00000260130 KCNA2P16389 499 aa19.05■□□□□ 0.64
SDCBP-201ENST00000260130 FOSBP53539 338 aa19.05■□□□□ 0.64
SDCBP-201ENST00000260130 RTP1P59025 263 aa19.05■□□□□ 0.64
SDCBP-201ENST00000260130 KRT40Q6A162 431 aa19.05■□□□□ 0.64
SDCBP-201ENST00000260130 OXER1Q8TDS5 423 aa19.05■□□□□ 0.64
SDCBP-201ENST00000260130 MTG1Q9BT17 334 aaPredicted RBP19.05■□□□□ 0.64
SDCBP-201ENST00000260130 BRMS1Q9HCU9 246 aa19.05■□□□□ 0.64
SDCBP-201ENST00000260130 PPFIA4O75335 1185 aa19.05■□□□□ 0.64
SDCBP-201ENST00000260130 MMP1P03956 469 aa19.05■□□□□ 0.64
SDCBP-201ENST00000260130 ARP10275 920 aa19.05■□□□□ 0.64
SDCBP-201ENST00000260130 CIITAP33076 1130 aa19.05■□□□□ 0.64
SDCBP-201ENST00000260130 KRT2P35908 639 aa19.05■□□□□ 0.64
SDCBP-201ENST00000260130 NONOQ15233 471 aaKnown RBP eCLIP19.05■□□□□ 0.64
SDCBP-201ENST00000260130 PKD2L1Q9P0L9 805 aa19.05■□□□□ 0.64
SDCBP-201ENST00000260130 ATP11BQ9Y2G3 1177 aa19.05■□□□□ 0.64
SDCBP-201ENST00000260130 IGLV3-22A0A075B6J6 115 aa19.04■□□□□ 0.64
SDCBP-201ENST00000260130 A0A0U1RQG5 324 aaPredicted RBP19.04■□□□□ 0.64
SDCBP-201ENST00000260130 CCDC194A0A1B0GVG4 234 aa19.04■□□□□ 0.64
SDCBP-201ENST00000260130 EDIL3O43854 480 aa19.04■□□□□ 0.64
SDCBP-201ENST00000260130 TRIM60Q495X7 471 aa19.04■□□□□ 0.64
SDCBP-201ENST00000260130 PLA2G4DQ86XP0 818 aa19.04■□□□□ 0.64
SDCBP-201ENST00000260130 C7orf61Q8IZ16 206 aa19.04■□□□□ 0.64
SDCBP-201ENST00000260130 C8orf76Q96K31 380 aa19.04■□□□□ 0.64
SDCBP-201ENST00000260130 ARVCFO00192 962 aa19.03■□□□□ 0.64
SDCBP-201ENST00000260130 CDK7P50613 346 aa19.03■□□□□ 0.64
SDCBP-201ENST00000260130 ITGA7Q13683 1181 aa19.03■□□□□ 0.64
SDCBP-201ENST00000260130 AGO4Q9HCK5 861 aaKnown RBP19.03■□□□□ 0.64
SDCBP-201ENST00000260130 NOP56O00567 594 aaKnown RBP19.03■□□□□ 0.64
SDCBP-201ENST00000260130 HOXD8P13378 290 aaPredicted RBP19.03■□□□□ 0.64
SDCBP-201ENST00000260130 PSMC6P62333 389 aa19.03■□□□□ 0.64
SDCBP-201ENST00000260130 GRIN2DO15399 1336 aa19.03■□□□□ 0.64
SDCBP-201ENST00000260130 SETQ01105 290 aaPredicted RBP19.02■□□□□ 0.64
SDCBP-201ENST00000260130 TLE2Q04725 743 aa19.02■□□□□ 0.64
SDCBP-201ENST00000260130 NR5A1Q13285 461 aa19.02■□□□□ 0.64
SDCBP-201ENST00000260130 INF2Q27J81 1249 aa19.02■□□□□ 0.64
SDCBP-201ENST00000260130 PRR16Q569H4 304 aa19.02■□□□□ 0.64
SDCBP-201ENST00000260130 PIK3AP1Q6ZUJ8 805 aa19.02■□□□□ 0.64
SDCBP-201ENST00000260130 DIS3L2Q8IYB7 885 aaKnown RBP19.02■□□□□ 0.64
SDCBP-201ENST00000260130 SLC43A3Q8NBI5 491 aa19.02■□□□□ 0.64
SDCBP-201ENST00000260130 GPR20Q99678 358 aa19.02■□□□□ 0.64
SDCBP-201ENST00000260130 SEZ6LQ9BYH1 1024 aa19.02■□□□□ 0.64
SDCBP-201ENST00000260130 KIF3AQ9Y496 699 aa19.02■□□□□ 0.64
SDCBP-201ENST00000260130 BTBD18B2RXH4 712 aa19.02■□□□□ 0.63
SDCBP-201ENST00000260130 GUCY1B3Q02153 619 aa19.02■□□□□ 0.63
SDCBP-201ENST00000260130 ANKRD33Q7Z3H0 272 aa19.02■□□□□ 0.63
SDCBP-201ENST00000260130 FBXO18Q8NFZ0 1043 aa19.02■□□□□ 0.63
SDCBP-201ENST00000260130 SDF4Q9BRK5 362 aa19.02■□□□□ 0.63
SDCBP-201ENST00000260130 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.02■□□□□ 0.63
SDCBP-201ENST00000260130 NFASCO94856 1347 aa19.02■□□□□ 0.63
SDCBP-201ENST00000260130 PDE4DIPQ5VU43 2346 aa19.01■□□□□ 0.63
SDCBP-201ENST00000260130 PQBP1O60828 265 aaKnown RBP19.01■□□□□ 0.63
SDCBP-201ENST00000260130 SP4Q02446 784 aa19.01■□□□□ 0.63
SDCBP-201ENST00000260130 SAFBQ15424 915 aaKnown RBP eCLIP19.01■□□□□ 0.63
SDCBP-201ENST00000260130 TNFRSF25Q93038 417 aa19.01■□□□□ 0.63
SDCBP-201ENST00000260130 TOX2Q96NM4 488 aa19.01■□□□□ 0.63
SDCBP-201ENST00000260130 MROH7Q68CQ1 1323 aa19.01■□□□□ 0.63
SDCBP-201ENST00000260130 CYP3A7-CYP3A51PA0A087WV96 503 aa19■□□□□ 0.63
SDCBP-201ENST00000260130 CYP3A7P24462 503 aa19■□□□□ 0.63
SDCBP-201ENST00000260130 ITGB3BPQ13352 177 aaPredicted RBP19■□□□□ 0.63
SDCBP-201ENST00000260130 EARS2Q5JPH6 523 aaKnown RBP19■□□□□ 0.63
SDCBP-201ENST00000260130 KAT2BQ92831 832 aa19■□□□□ 0.63
SDCBP-201ENST00000260130 LENG9Q96B70 501 aa19■□□□□ 0.63
SDCBP-201ENST00000260130 ZNF577Q9BSK1 485 aa19■□□□□ 0.63
SDCBP-201ENST00000260130 JPH1Q9HDC5 661 aaPredicted RBP19■□□□□ 0.63
SDCBP-201ENST00000260130 TELO2Q9Y4R8 837 aa19■□□□□ 0.63
SDCBP-201ENST00000260130 DCDC2CA8MYV0 355 aa19■□□□□ 0.63
SDCBP-201ENST00000260130 IPO5O00410 1097 aaKnown RBP19■□□□□ 0.63
SDCBP-201ENST00000260130 CUL4AQ13619 759 aa19■□□□□ 0.63
SDCBP-201ENST00000260130 NBPF20Q3BBV1 942 aa19■□□□□ 0.63
SDCBP-201ENST00000260130 MOXD1Q6UVY6 613 aa19■□□□□ 0.63
SDCBP-201ENST00000260130 NEK8Q86SG6 692 aa19■□□□□ 0.63
SDCBP-201ENST00000260130 GRPEL1Q9HAV7 217 aa19■□□□□ 0.63
SDCBP-201ENST00000260130 SLC9A2Q9UBY0 812 aa19■□□□□ 0.63
SDCBP-201ENST00000260130 H0YGN5 161 aa18.99■□□□□ 0.63
SDCBP-201ENST00000260130 F2P00734 622 aa18.99■□□□□ 0.63
SDCBP-201ENST00000260130 ZNF286BP0CG31 522 aa18.99■□□□□ 0.63
SDCBP-201ENST00000260130 GJB2P29033 226 aa18.99■□□□□ 0.63
SDCBP-201ENST00000260130 LETM2Q2VYF4 491 aa18.99■□□□□ 0.63
SDCBP-201ENST00000260130 Q4G0T1 1027 aa18.99■□□□□ 0.63
SDCBP-201ENST00000260130 SEPT1Q8WYJ6 367 aa18.99■□□□□ 0.63
SDCBP-201ENST00000260130 C16orf70Q9BSU1 422 aa18.99■□□□□ 0.63
SDCBP-201ENST00000260130 KATNAL1Q9BW62 490 aa18.99■□□□□ 0.63
SDCBP-201ENST00000260130 SMC3Q9UQE7 1217 aa18.99■□□□□ 0.63
SDCBP-201ENST00000260130 GOLGA6L22H0YM25 854 aa18.99■□□□□ 0.63
SDCBP-201ENST00000260130 TDP2O95551 362 aa18.99■□□□□ 0.63
SDCBP-201ENST00000260130 CHMP4BP1P59074 171 aa18.99■□□□□ 0.63
SDCBP-201ENST00000260130 UIMC1Q96RL1 719 aa18.99■□□□□ 0.63
SDCBP-201ENST00000260130 TBC1D22BQ9NU19 505 aa18.99■□□□□ 0.63
SDCBP-201ENST00000260130 MYH7BA7E2Y1 1941 aa18.99■□□□□ 0.63
SDCBP-201ENST00000260130 ALPK3Q96L96 1907 aa18.99■□□□□ 0.63
SDCBP-201ENST00000260130 DHX15O43143 795 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms