RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 SLAIN1Q8ND83 568 aa17.85■□□□□ 0.45
CCDC90B-201ENST00000260054 CLIC6Q96NY7 704 aa17.85■□□□□ 0.45
CCDC90B-201ENST00000260054 RIT2Q99578 217 aa17.85■□□□□ 0.45
CCDC90B-201ENST00000260054 SENP7Q9BQF6 1050 aa17.85■□□□□ 0.45
CCDC90B-201ENST00000260054 VAV3Q9UKW4 847 aa17.85■□□□□ 0.45
CCDC90B-201ENST00000260054 PCDHA7Q9UN72 937 aa17.85■□□□□ 0.45
CCDC90B-201ENST00000260054 SRPRBQ9Y5M8 271 aaKnown RBP17.85■□□□□ 0.45
CCDC90B-201ENST00000260054 ELP1O95163 1332 aa17.84■□□□□ 0.45
CCDC90B-201ENST00000260054 ADCY6O43306 1168 aa17.84■□□□□ 0.45
CCDC90B-201ENST00000260054 SORBS3O60504 671 aa17.84■□□□□ 0.45
CCDC90B-201ENST00000260054 PTGS1P23219 599 aa17.84■□□□□ 0.45
CCDC90B-201ENST00000260054 GRK4P32298 578 aa17.84■□□□□ 0.45
CCDC90B-201ENST00000260054 TECP42680 631 aa17.84■□□□□ 0.45
CCDC90B-201ENST00000260054 SPIRE1Q08AE8 756 aa17.84■□□□□ 0.45
CCDC90B-201ENST00000260054 CTU1Q7Z7A3 348 aaKnown RBP17.84■□□□□ 0.45
CCDC90B-201ENST00000260054 KRI1Q8N9T8 703 aaKnown RBP17.84■□□□□ 0.45
CCDC90B-201ENST00000260054 COPS5Q92905 334 aa17.84■□□□□ 0.45
CCDC90B-201ENST00000260054 FERMT2Q96AC1 680 aa17.84■□□□□ 0.45
CCDC90B-201ENST00000260054 NRBP1Q9UHY1 535 aa17.84■□□□□ 0.45
CCDC90B-201ENST00000260054 PCDHA12Q9UN75 941 aa17.84■□□□□ 0.45
CCDC90B-201ENST00000260054 DDX39AO00148 427 aaKnown RBP17.83■□□□□ 0.45
CCDC90B-201ENST00000260054 GAS7O60861 476 aa17.83■□□□□ 0.45
CCDC90B-201ENST00000260054 PRKAR2AP13861 404 aaKnown RBP17.83■□□□□ 0.45
CCDC90B-201ENST00000260054 SMPD1P17405 629 aa17.83■□□□□ 0.45
CCDC90B-201ENST00000260054 FXR2P51116 673 aaKnown RBP eCLIP17.83■□□□□ 0.45
CCDC90B-201ENST00000260054 AXDND1Q5T1B0 1012 aaPredicted RBP17.83■□□□□ 0.45
CCDC90B-201ENST00000260054 GJC2Q5T442 439 aaPredicted RBP17.83■□□□□ 0.45
CCDC90B-201ENST00000260054 MAP3K21Q5TCX8 1036 aa17.83■□□□□ 0.45
CCDC90B-201ENST00000260054 TMEM87AQ8NBN3 555 aa17.83■□□□□ 0.45
CCDC90B-201ENST00000260054 TEKT3Q9BXF9 490 aa17.83■□□□□ 0.45
CCDC90B-201ENST00000260054 TBC1D22BQ9NU19 505 aa17.83■□□□□ 0.45
CCDC90B-201ENST00000260054 NFASCO94856 1347 aa17.83■□□□□ 0.44
CCDC90B-201ENST00000260054 POTEMA6NI47 508 aa17.83■□□□□ 0.44
CCDC90B-201ENST00000260054 GGPS1O95749 300 aa17.83■□□□□ 0.44
CCDC90B-201ENST00000260054 NEDD9Q14511 834 aa17.83■□□□□ 0.44
CCDC90B-201ENST00000260054 IQSEC1Q6DN90 963 aa17.83■□□□□ 0.44
CCDC90B-201ENST00000260054 B3GNT9Q6UX72 402 aa17.83■□□□□ 0.44
CCDC90B-201ENST00000260054 CYFIP1Q7L576 1253 aa17.83■□□□□ 0.44
CCDC90B-201ENST00000260054 SDF4Q9BRK5 362 aa17.83■□□□□ 0.44
CCDC90B-201ENST00000260054 CSRNP2Q9H175 543 aa17.83■□□□□ 0.44
CCDC90B-201ENST00000260054 TELO2Q9Y4R8 837 aa17.83■□□□□ 0.44
CCDC90B-201ENST00000260054 FARP2O94887 1054 aaPredicted RBP17.82■□□□□ 0.44
CCDC90B-201ENST00000260054 CCNE2O96020 404 aa17.82■□□□□ 0.44
CCDC90B-201ENST00000260054 INHAP05111 366 aa17.82■□□□□ 0.44
CCDC90B-201ENST00000260054 TNFAIP2Q03169 654 aa17.82■□□□□ 0.44
CCDC90B-201ENST00000260054 PPP2R5CQ13362 524 aa17.82■□□□□ 0.44
CCDC90B-201ENST00000260054 TMEM266Q2M3C6 531 aa17.82■□□□□ 0.44
CCDC90B-201ENST00000260054 DUSP28Q4G0W2 176 aa17.82■□□□□ 0.44
CCDC90B-201ENST00000260054 SPECC1Q5M775 1068 aa17.82■□□□□ 0.44
CCDC90B-201ENST00000260054 CELF3Q5SZQ8 465 aaKnown RBP17.82■□□□□ 0.44
CCDC90B-201ENST00000260054 IGSF22Q8N9C0 903 aa17.82■□□□□ 0.44
CCDC90B-201ENST00000260054 SH3TC2Q8TF17 1288 aa17.82■□□□□ 0.44
CCDC90B-201ENST00000260054 LENG1Q96BZ8 264 aaPredicted RBP17.82■□□□□ 0.44
CCDC90B-201ENST00000260054 UNC45AQ9H3U1 944 aa17.82■□□□□ 0.44
CCDC90B-201ENST00000260054 JPH1Q9HDC5 661 aaPredicted RBP17.82■□□□□ 0.44
CCDC90B-201ENST00000260054 DOCK5Q9H7D0 1870 aa17.82■□□□□ 0.44
CCDC90B-201ENST00000260054 CHMP2AO43633 222 aa17.81■□□□□ 0.44
CCDC90B-201ENST00000260054 CUTAO60888 179 aa17.81■□□□□ 0.44
CCDC90B-201ENST00000260054 CCND3P30281 292 aaPredicted RBP17.81■□□□□ 0.44
CCDC90B-201ENST00000260054 CSPP1Q1MSJ5 1256 aa17.81■□□□□ 0.44
CCDC90B-201ENST00000260054 METTL7BQ6UX53 244 aa17.81■□□□□ 0.44
CCDC90B-201ENST00000260054 GIMAP8Q8ND71 665 aaPredicted RBP17.81■□□□□ 0.44
CCDC90B-201ENST00000260054 SLC9A2Q9UBY0 812 aa17.81■□□□□ 0.44
CCDC90B-201ENST00000260054 FAM184BQ9ULE4 1060 aa17.81■□□□□ 0.44
CCDC90B-201ENST00000260054 GNEQ9Y223 722 aaKnown RBP17.81■□□□□ 0.44
CCDC90B-201ENST00000260054 POTEFA5A3E0 1075 aa17.8■□□□□ 0.44
CCDC90B-201ENST00000260054 PP2D1A8MPX8 630 aa17.8■□□□□ 0.44
CCDC90B-201ENST00000260054 EML1O00423 815 aa17.8■□□□□ 0.44
CCDC90B-201ENST00000260054 PRPF40AO75400 957 aaKnown RBP17.8■□□□□ 0.44
CCDC90B-201ENST00000260054 AKR1A1P14550 325 aa17.8■□□□□ 0.44
CCDC90B-201ENST00000260054 CDC25AP30304 524 aa17.8■□□□□ 0.44
CCDC90B-201ENST00000260054 LONP1P36776 959 aaKnown RBP17.8■□□□□ 0.44
CCDC90B-201ENST00000260054 SP4Q02446 784 aa17.8■□□□□ 0.44
CCDC90B-201ENST00000260054 ARHGAP1Q07960 439 aa17.8■□□□□ 0.44
CCDC90B-201ENST00000260054 PDIA5Q14554 519 aa17.8■□□□□ 0.44
CCDC90B-201ENST00000260054 TPRNQ4KMQ1 711 aa17.8■□□□□ 0.44
CCDC90B-201ENST00000260054 ADALQ6DHV7 355 aa17.8■□□□□ 0.44
CCDC90B-201ENST00000260054 NCAPH2Q6IBW4 605 aa17.8■□□□□ 0.44
CCDC90B-201ENST00000260054 SHC4Q6S5L8 630 aa17.8■□□□□ 0.44
CCDC90B-201ENST00000260054 USP49Q70CQ1 688 aa17.8■□□□□ 0.44
CCDC90B-201ENST00000260054 DHX37Q8IY37 1157 aaKnown RBP17.8■□□□□ 0.44
CCDC90B-201ENST00000260054 MLXIPQ9HAP2 919 aa17.8■□□□□ 0.44
CCDC90B-201ENST00000260054 SEPT4O43236 478 aa17.8■□□□□ 0.44
CCDC90B-201ENST00000260054 GADD45BO75293 160 aaPredicted RBP17.8■□□□□ 0.44
CCDC90B-201ENST00000260054 CNGA1P29973 690 aa17.8■□□□□ 0.44
CCDC90B-201ENST00000260054 KRT76Q01546 638 aa17.8■□□□□ 0.44
CCDC90B-201ENST00000260054 ZNF579Q8NAF0 562 aaKnown RBP17.8■□□□□ 0.44
CCDC90B-201ENST00000260054 RAB34Q9BZG1 259 aa17.8■□□□□ 0.44
CCDC90B-201ENST00000260054 LRWD1Q9UFC0 647 aa17.8■□□□□ 0.44
CCDC90B-201ENST00000260054 NKRFO15226 690 aaKnown RBP eCLIP17.79■□□□□ 0.44
CCDC90B-201ENST00000260054 GH1P01241 217 aa17.79■□□□□ 0.44
CCDC90B-201ENST00000260054 HSDL1Q3SXM5 330 aa17.79■□□□□ 0.44
CCDC90B-201ENST00000260054 ZNF746Q6NUN9 644 aaPredicted RBP17.79■□□□□ 0.44
CCDC90B-201ENST00000260054 FBXO46Q6PJ61 603 aaPredicted RBP17.79■□□□□ 0.44
CCDC90B-201ENST00000260054 EPSTI1Q96J88 318 aa17.79■□□□□ 0.44
CCDC90B-201ENST00000260054 MCM4P33991 863 aa17.78■□□□□ 0.44
CCDC90B-201ENST00000260054 ACTR2P61160 394 aa17.78■□□□□ 0.44
CCDC90B-201ENST00000260054 SLC9C1Q4G0N8 1177 aa17.78■□□□□ 0.44
CCDC90B-201ENST00000260054 TLK2Q86UE8 772 aa17.78■□□□□ 0.44
CCDC90B-201ENST00000260054 SYMPKQ92797 1274 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms