RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 STAM2O75886 525 aa21.89■■□□□ 1.09
TM6SF1-201ENST00000258909 ARHGEF15O94989 841 aa21.89■■□□□ 1.09
TM6SF1-201ENST00000258909 RBL2Q08999 1139 aa21.89■■□□□ 1.09
TM6SF1-201ENST00000258909 NEDD9Q14511 834 aa21.89■■□□□ 1.09
TM6SF1-201ENST00000258909 UBE2SQ16763 222 aa21.89■■□□□ 1.09
TM6SF1-201ENST00000258909 PCNX4Q63HM2 1172 aa21.89■■□□□ 1.09
TM6SF1-201ENST00000258909 TMTC3Q6ZXV5 915 aa21.89■■□□□ 1.09
TM6SF1-201ENST00000258909 PHOSPHO2Q8TCD6 241 aa21.89■■□□□ 1.09
TM6SF1-201ENST00000258909 NEK1Q96PY6 1258 aa21.89■■□□□ 1.09
TM6SF1-201ENST00000258909 TUT1Q9H6E5 874 aaKnown RBP21.89■■□□□ 1.09
TM6SF1-201ENST00000258909 PSTPIP2Q9H939 334 aa21.89■■□□□ 1.09
TM6SF1-201ENST00000258909 TTC28Q96AY4 2481 aa21.88■■□□□ 1.09
TM6SF1-201ENST00000258909 BAIAP3O94812 1187 aa21.88■■□□□ 1.09
TM6SF1-201ENST00000258909 KCNJ6P48051 423 aa21.88■■□□□ 1.09
TM6SF1-201ENST00000258909 RNF20Q5VTR2 975 aa21.88■■□□□ 1.09
TM6SF1-201ENST00000258909 TRAF7Q6Q0C0 670 aa21.88■■□□□ 1.09
TM6SF1-201ENST00000258909 METTL7BQ6UX53 244 aa21.88■■□□□ 1.09
TM6SF1-201ENST00000258909 RASEFQ8IZ41 740 aa21.88■■□□□ 1.09
TM6SF1-201ENST00000258909 GPR20Q99678 358 aa21.88■■□□□ 1.09
TM6SF1-201ENST00000258909 C17orf102A2RUQ5 167 aa21.87■■□□□ 1.09
TM6SF1-201ENST00000258909 SMIM10L2AP0DMW4 78 aa21.87■■□□□ 1.09
TM6SF1-201ENST00000258909 SMIM10L2BP0DMW5 78 aa21.87■■□□□ 1.09
TM6SF1-201ENST00000258909 WDR5P61964 334 aaKnown RBP21.87■■□□□ 1.09
TM6SF1-201ENST00000258909 MBTPS1Q14703 1052 aa21.87■■□□□ 1.09
TM6SF1-201ENST00000258909 ADCK5Q3MIX3 580 aa21.87■■□□□ 1.09
TM6SF1-201ENST00000258909 UTP14CQ5TAP6 766 aaKnown RBP21.87■■□□□ 1.09
TM6SF1-201ENST00000258909 SGMS1Q86VZ5 419 aa21.87■■□□□ 1.09
TM6SF1-201ENST00000258909 TRIM50Q86XT4 487 aa21.87■■□□□ 1.09
TM6SF1-201ENST00000258909 CXCL10P02778 98 aa21.86■■□□□ 1.09
TM6SF1-201ENST00000258909 THPOP40225 353 aa21.86■■□□□ 1.09
TM6SF1-201ENST00000258909 DEFB103AP81534 67 aa21.86■■□□□ 1.09
TM6SF1-201ENST00000258909 CNKSR3Q6P9H4 555 aa21.86■■□□□ 1.09
TM6SF1-201ENST00000258909 SYNE3Q6ZMZ3 975 aa21.86■■□□□ 1.09
TM6SF1-201ENST00000258909 HEATR3Q7Z4Q2 680 aa21.86■■□□□ 1.09
TM6SF1-201ENST00000258909 SERINC5Q86VE9 423 aa21.86■■□□□ 1.09
TM6SF1-201ENST00000258909 MICALL1Q8N3F8 863 aa21.86■■□□□ 1.09
TM6SF1-201ENST00000258909 ATP6V0A1Q93050 837 aa21.86■■□□□ 1.09
TM6SF1-201ENST00000258909 RNPEPQ9H4A4 650 aa21.86■■□□□ 1.09
TM6SF1-201ENST00000258909 BRPF3Q9ULD4 1205 aa21.86■■□□□ 1.09
TM6SF1-201ENST00000258909 KIF28PB7ZC32 967 aa21.85■■□□□ 1.09
TM6SF1-201ENST00000258909 TREHO43280 583 aa21.85■■□□□ 1.09
TM6SF1-201ENST00000258909 EXOSC10Q01780 885 aaKnown RBP21.85■■□□□ 1.09
TM6SF1-201ENST00000258909 APOA5Q6Q788 366 aa21.85■■□□□ 1.09
TM6SF1-201ENST00000258909 SPRED2Q7Z698 418 aa21.85■■□□□ 1.09
TM6SF1-201ENST00000258909 NLRX1Q86UT6 975 aa21.85■■□□□ 1.09
TM6SF1-201ENST00000258909 USP26Q9BXU7 913 aa21.85■■□□□ 1.09
TM6SF1-201ENST00000258909 PKD2L1Q9P0L9 805 aa21.85■■□□□ 1.09
TM6SF1-201ENST00000258909 PRRC2BQ5JSZ5 2229 aaKnown RBP21.84■■□□□ 1.09
TM6SF1-201ENST00000258909 EPOPA6NHQ4 379 aa21.84■■□□□ 1.09
TM6SF1-201ENST00000258909 TLL1O43897 1013 aa21.84■■□□□ 1.09
TM6SF1-201ENST00000258909 ATP9AO75110 1047 aa21.84■■□□□ 1.09
TM6SF1-201ENST00000258909 CDC45O75419 566 aa21.84■■□□□ 1.09
TM6SF1-201ENST00000258909 PARNO95453 639 aaKnown RBP21.84■■□□□ 1.09
TM6SF1-201ENST00000258909 TAP1Q03518 808 aa21.84■■□□□ 1.09
TM6SF1-201ENST00000258909 XRRA1Q6P2D8 792 aa21.84■■□□□ 1.09
TM6SF1-201ENST00000258909 ARNTL2Q8WYA1 636 aa21.84■■□□□ 1.09
TM6SF1-201ENST00000258909 SETD4Q9NVD3 440 aa21.84■■□□□ 1.09
TM6SF1-201ENST00000258909 LCHNA4D1U4 455 aa21.83■■□□□ 1.09
TM6SF1-201ENST00000258909 ITGB5P18084 799 aa21.83■■□□□ 1.09
TM6SF1-201ENST00000258909 DHX32Q7L7V1 743 aaKnown RBP21.83■■□□□ 1.09
TM6SF1-201ENST00000258909 SENP7Q9BQF6 1050 aa21.83■■□□□ 1.09
TM6SF1-201ENST00000258909 ZBED2Q9BTP6 218 aa21.83■■□□□ 1.09
TM6SF1-201ENST00000258909 PCDHA6Q9UN73 950 aa21.83■■□□□ 1.09
TM6SF1-201ENST00000258909 PCDHA8Q9Y5H6 950 aa21.83■■□□□ 1.09
TM6SF1-201ENST00000258909 SPDYE3A6NKU9 549 aa21.83■■□□□ 1.08
TM6SF1-201ENST00000258909 RSPH10B2B2RC85 870 aa21.83■■□□□ 1.08
TM6SF1-201ENST00000258909 RSPH10BP0C881 870 aa21.83■■□□□ 1.08
TM6SF1-201ENST00000258909 HOXC8P31273 242 aa21.83■■□□□ 1.08
TM6SF1-201ENST00000258909 WWC2Q6AWC2 1192 aa21.83■■□□□ 1.08
TM6SF1-201ENST00000258909 CNTNAP5Q8WYK1 1306 aa21.83■■□□□ 1.08
TM6SF1-201ENST00000258909 KAT6AQ92794 2004 aa21.82■■□□□ 1.08
TM6SF1-201ENST00000258909 ZBTB43O43298 467 aa21.82■■□□□ 1.08
TM6SF1-201ENST00000258909 CTSHP09668 335 aa21.82■■□□□ 1.08
TM6SF1-201ENST00000258909 IKBKEQ14164 716 aa21.82■■□□□ 1.08
TM6SF1-201ENST00000258909 RTN1Q16799 776 aa21.82■■□□□ 1.08
TM6SF1-201ENST00000258909 KRT40Q6A162 431 aa21.82■■□□□ 1.08
TM6SF1-201ENST00000258909 TYW1BQ6NUM6 668 aa21.82■■□□□ 1.08
TM6SF1-201ENST00000258909 FAM117BQ6P1L5 589 aa21.82■■□□□ 1.08
TM6SF1-201ENST00000258909 GPRASP2Q96D09 838 aa21.82■■□□□ 1.08
TM6SF1-201ENST00000258909 OSBPL7Q9BZF2 842 aa21.82■■□□□ 1.08
TM6SF1-201ENST00000258909 XIRP2A4UGR9 3374 aa21.81■■□□□ 1.08
TM6SF1-201ENST00000258909 ABHD14A-ACY1A0A1B0GW23 586 aa21.81■■□□□ 1.08
TM6SF1-201ENST00000258909 LGR5O75473 907 aa21.81■■□□□ 1.08
TM6SF1-201ENST00000258909 CPA1P15085 419 aa21.81■■□□□ 1.08
TM6SF1-201ENST00000258909 KCNA2P16389 499 aa21.81■■□□□ 1.08
TM6SF1-201ENST00000258909 TCF7P36402 384 aaPredicted RBP21.81■■□□□ 1.08
TM6SF1-201ENST00000258909 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.81■■□□□ 1.08
TM6SF1-201ENST00000258909 DBF4BQ8NFT6 615 aa21.81■■□□□ 1.08
TM6SF1-201ENST00000258909 PGBD1Q96JS3 809 aa21.81■■□□□ 1.08
TM6SF1-201ENST00000258909 RBM28Q9NW13 759 aaKnown RBP21.81■■□□□ 1.08
TM6SF1-201ENST00000258909 THEGQ9P2T0 379 aa21.81■■□□□ 1.08
TM6SF1-201ENST00000258909 ZNF215Q9UL58 517 aaPredicted RBP21.81■■□□□ 1.08
TM6SF1-201ENST00000258909 NAP1L2Q9ULW6 460 aaPredicted RBP21.81■■□□□ 1.08
TM6SF1-201ENST00000258909 UBIAD1Q9Y5Z9 338 aa21.81■■□□□ 1.08
TM6SF1-201ENST00000258909 V9GY48 417 aaPredicted RBP21.81■■□□□ 1.08
TM6SF1-201ENST00000258909 KLF18A0A0U1RQI7 1052 aa21.8■■□□□ 1.08
TM6SF1-201ENST00000258909 NAPAP54920 295 aa21.8■■□□□ 1.08
TM6SF1-201ENST00000258909 ARHGAP4P98171 946 aa21.8■■□□□ 1.08
TM6SF1-201ENST00000258909 FUT2Q10981 343 aa21.8■■□□□ 1.08
TM6SF1-201ENST00000258909 MTMR1Q13613 665 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms