RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 ANO7Q6IWH7 933 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 MILR1Q7Z6M3 343 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 NOP9Q86U38 636 aaKnown RBP8.43□□□□□ -1.06
GPNMB-201ENST00000258733 HOMER1Q86YM7 354 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 SPICE1Q8N0Z3 855 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 CARNMT1Q8N4J0 409 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 JDP2Q8WYK2 163 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 TBCBQ99426 244 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 BPIFA3Q9BQP9 254 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 HGH1Q9BTY7 390 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 SUGCTQ9HAC7 445 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 TRPC7Q9HCX4 862 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 RAB21Q9UL25 225 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 RALGAPBQ86X10 1494 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 CCDC69A6NI79 296 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 A6NNZ2 444 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 GOLGA8MH3BSY2 632 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 ST18O60284 1047 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 S100A6P06703 90 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 ATF7P17544 494 aaPredicted RBP8.43□□□□□ -1.06
GPNMB-201ENST00000258733 SP100P23497 879 aaPredicted RBP8.43□□□□□ -1.06
GPNMB-201ENST00000258733 SERPINB6P35237 376 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 HNF1BP35680 557 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 ELF3P78545 371 aaPredicted RBP8.43□□□□□ -1.06
GPNMB-201ENST00000258733 HSPA14Q0VDF9 509 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 HLTFQ14527 1009 aaKnown RBP eCLIP8.43□□□□□ -1.06
GPNMB-201ENST00000258733 INSCQ1MX18 579 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 TUBB8Q3ZCM7 444 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 INTS8Q75QN2 995 aaKnown RBP8.43□□□□□ -1.06
GPNMB-201ENST00000258733 LRRTM3Q86VH5 581 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 TRMT2AQ8IZ69 625 aaKnown RBP8.43□□□□□ -1.06
GPNMB-201ENST00000258733 LSMEM1Q8N8F7 131 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 IFT43Q96FT9 208 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 ACAP3Q96P50 834 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 MOGAT1Q96PD6 335 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 FTOQ9C0B1 505 aaKnown RBP eCLIP8.43□□□□□ -1.06
GPNMB-201ENST00000258733 PSTPIP2Q9H939 334 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 ABCB6Q9NP58 842 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 DSEQ9UL01 958 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 GIT1Q9Y2X7 761 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 PARP3Q9Y6F1 533 aa8.43□□□□□ -1.06
GPNMB-201ENST00000258733 GPATCH8Q9UKJ3 1502 aaKnown RBP8.42□□□□□ -1.06
GPNMB-201ENST00000258733 PREX1Q8TCU6 1659 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 TRAV6A0A075B6T7 132 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 ENPP3O14638 875 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 ONECUT3O60422 494 aaPredicted RBP8.42□□□□□ -1.06
GPNMB-201ENST00000258733 PRKACAP17612 351 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 ALAS2P22557 587 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 MARSP56192 900 aaKnown RBP8.42□□□□□ -1.06
GPNMB-201ENST00000258733 ARID5BQ14865 1188 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 SNX30Q5VWJ9 437 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 SDE2Q6IQ49 451 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 VASH1Q7L8A9 365 aaPredicted RBP8.42□□□□□ -1.06
GPNMB-201ENST00000258733 CHD1LQ86WJ1 897 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 TRPV6Q9H1D0 765 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 VCXQ9H320 206 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 VIPAS39Q9H9C1 493 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 SCPEP1Q9HB40 452 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 FAM184BQ9ULE4 1060 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 TELO2Q9Y4R8 837 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 UNC13BO14795 1591 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 TCHHQ07283 1943 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 HDAC3O15379 428 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 SERPINB7O75635 380 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 GNA14O95837 355 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 OLFM2O95897 454 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 KRT10P13645 584 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 THOP1P52888 689 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 KIF22Q14807 665 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 PDCD4Q53EL6 469 aaKnown RBP8.42□□□□□ -1.06
GPNMB-201ENST00000258733 ANKRD39Q53RE8 183 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 TJAP1Q5JTD0 557 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 SPATA1Q5VX52 437 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 METTL21CQ5VZV1 264 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 E4F1Q66K89 784 aaPredicted RBP8.42□□□□□ -1.06
GPNMB-201ENST00000258733 INTS3Q68E01 1043 aaKnown RBP8.42□□□□□ -1.06
GPNMB-201ENST00000258733 RTL10Q7L3V2 364 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 MDM1Q8TC05 714 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 OSBP2Q969R2 916 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 MED30Q96HR3 178 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 CIB1Q99828 191 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 MRPL9Q9BYD2 267 aaKnown RBP8.42□□□□□ -1.06
GPNMB-201ENST00000258733 TBCCD1Q9NVR7 557 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 HACD3Q9P035 362 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 CTNNAL1Q9UBT7 734 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 MTRF1LQ9UGC7 380 aaKnown RBP8.42□□□□□ -1.06
GPNMB-201ENST00000258733 SNX5Q9Y5X3 404 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 TACC3Q9Y6A5 838 aa8.42□□□□□ -1.06
GPNMB-201ENST00000258733 STRCQ7RTU9 1775 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 KRBA1A5PL33 1030 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 GOLGA8CPA6NN73 597 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 KMOO15229 486 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 LSP1P33241 339 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 TMED10P49755 219 aaKnown RBP8.41□□□□□ -1.06
GPNMB-201ENST00000258733 PKN2Q16513 984 aaKnown RBP8.41□□□□□ -1.06
GPNMB-201ENST00000258733 NDUFA5Q16718 116 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 Q3C1V9 767 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 ANKRD20A2Q5SQ80 823 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 ANKRD20A1Q5TYW2 823 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 ANKRD20A3Q5VUR7 823 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms