RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 SWAP70Q9UH65 585 aa11.04□□□□□ -0.64
SEMA6A-201ENST00000257414 SERPINB13Q9UIV8 391 aa11.04□□□□□ -0.64
SEMA6A-201ENST00000257414 PAPD7Q5XG87 772 aaKnown RBP11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 TMED8Q6PL24 325 aaPredicted RBP11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 NEDD1Q8NHV4 660 aa11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 MS4A14Q96JA4 679 aa11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 ERGIC2Q96RQ1 377 aa11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 EFCC1Q9HA90 598 aa11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 ARHGEF35A5YM69 484 aa11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 LRRC10BA6NIK2 292 aa11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 CLIC2O15247 247 aa11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 ABL1P00519 1130 aa11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 CFBP00751 764 aa11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 GRAPQ13588 217 aa11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 SLFN13Q68D06 897 aa11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 ALKBH5Q6P6C2 394 aaKnown RBP11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 GRAPLQ8TC17 118 aaPredicted RBP11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 ATP6V0A2Q9Y487 856 aa11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 PLEKHG2Q9H7P9 1386 aa11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 PNMA6FA0A0J9YX94 578 aa11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 DENND2CQ68D51 928 aa11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 CACNA2D3Q8IZS8 1091 aa11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 SLC4A9Q96Q91 983 aa11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 KCNK9Q9NPC2 374 aa11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 EHD2Q9NZN4 543 aa11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 STK24Q9Y6E0 443 aa11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 CAPN6Q9Y6Q1 641 aa11.03□□□□□ -0.64
SEMA6A-201ENST00000257414 VEGFAP15692 232 aaPredicted RBP11.02□□□□□ -0.64
SEMA6A-201ENST00000257414 GBP2P32456 591 aaPredicted RBP11.02□□□□□ -0.64
SEMA6A-201ENST00000257414 GJC1P36383 396 aa11.02□□□□□ -0.64
SEMA6A-201ENST00000257414 TMEM132AQ24JP5 1023 aa11.02□□□□□ -0.64
SEMA6A-201ENST00000257414 PAIP2Q9BPZ3 127 aaKnown RBP11.02□□□□□ -0.64
SEMA6A-201ENST00000257414 NARFQ9UHQ1 456 aa11.02□□□□□ -0.64
SEMA6A-201ENST00000257414 A0A1W2PQJ5 194 aa11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 GFPT2O94808 682 aa11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 HOXA7P31268 230 aaPredicted RBP11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 ORC2Q13416 577 aaPredicted RBP11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 SH2D3CQ8N5H7 860 aa11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 UHMK1Q8TAS1 419 aaKnown RBP11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 PBKQ96KB5 322 aa11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 CEP63Q96MT8 703 aa11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 POLD4Q9HCU8 107 aa11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 RBM12Q9NTZ6 932 aaKnown RBP11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 MAD2L2Q9UI95 211 aa11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 PLAGL2Q9UPG8 496 aa11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 PLAAQ9Y263 795 aa11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 LMTK3Q96Q04 1460 aa11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 KIF1AQ12756 1690 aa11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 POTEB3A0JP26 581 aa11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 POTECB2RU33 542 aa11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 PRPF6O94906 941 aaKnown RBP11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 KCNH2Q12809 1159 aa11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 GRIPAP1Q4V328 841 aa11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 POTEBQ6S5H4 581 aa11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 TEKT1Q969V4 418 aa11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 EDEM3Q9BZQ6 932 aa11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 ZMYND12Q9H0C1 365 aa11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 GCNT4Q9P109 453 aa11.02□□□□□ -0.65
SEMA6A-201ENST00000257414 WTIPA6NIX2 430 aaPredicted RBP11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 DDX39AO00148 427 aaKnown RBP11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 FERP16591 822 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 RASA1P20936 1047 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 PBX1P40424 430 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 LRRC31Q6UY01 552 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 FBXO11Q86XK2 927 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 RABGAP1Q9Y3P9 1069 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 DCCP43146 1447 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 RNF225M0QZC1 329 aaPredicted RBP11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 RGS16O15492 202 aaPredicted RBP11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 CCDC105Q8IYK2 499 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 MMGT1Q8N4V1 131 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 BICD1Q96G01 975 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 DMGDHQ9UI17 866 aaKnown RBP11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 ATP8A1Q9Y2Q0 1164 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 A0A1W2PRG0 241 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 HMGB1P1B2RPK0 211 aaPredicted RBP11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 BCRP11274 1271 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 DHX9Q08211 1270 aaKnown RBP11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 DOK7Q18PE1 504 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 C10orf76Q5T2E6 689 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 GKAP1Q5VSY0 366 aaPredicted RBP11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 FAM178BQ8IXR5 827 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 MED15Q96RN5 788 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 CD209Q9NNX6 404 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 TACC3Q9Y6A5 838 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 SSU72P8A0A1W2PR75 194 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 USP17L15C9J2P7 530 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 USP17L13C9JLJ4 530 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 USP17L11C9JVI0 530 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 USP17L18D6R9N7 530 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 USP17L22D6RA61 530 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 USP17L17D6RBQ6 530 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 USP17L19D6RCP7 530 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 USP17L20D6RJB6 530 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 IRAK1P51617 712 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 USP17L24Q0WX57 530 aa11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 EZH2Q15910 746 aaKnown RBP11.01□□□□□ -0.65
SEMA6A-201ENST00000257414 FAM182BQ5T319 152 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms