RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 SYDE2Q5VT97 1194 aa14.09□□□□□ -0.15
RFPL3-201ENST00000249007 MCTP2Q6DN12 878 aa14.09□□□□□ -0.15
RFPL3-201ENST00000249007 TTBK2Q6IQ55 1244 aa14.09□□□□□ -0.15
RFPL3-201ENST00000249007 DCAF4Q8WV16 495 aa14.09□□□□□ -0.15
RFPL3-201ENST00000249007 CLP1Q92989 425 aaKnown RBP14.09□□□□□ -0.15
RFPL3-201ENST00000249007 OSBP2Q969R2 916 aa14.09□□□□□ -0.15
RFPL3-201ENST00000249007 RIPOR3Q96MK2 946 aa14.09□□□□□ -0.15
RFPL3-201ENST00000249007 PNMA2Q9UL42 364 aa14.09□□□□□ -0.15
RFPL3-201ENST00000249007 BAHCC1Q9P281 2608 aa14.08□□□□□ -0.16
RFPL3-201ENST00000249007 GPAA1O43292 621 aa14.08□□□□□ -0.16
RFPL3-201ENST00000249007 CTSHP09668 335 aa14.08□□□□□ -0.16
RFPL3-201ENST00000249007 GNAT2P19087 354 aa14.08□□□□□ -0.16
RFPL3-201ENST00000249007 CAMK1Q14012 370 aa14.08□□□□□ -0.16
RFPL3-201ENST00000249007 BTNL9Q6UXG8 535 aa14.08□□□□□ -0.16
RFPL3-201ENST00000249007 ZBTB33Q86T24 672 aa14.08□□□□□ -0.16
RFPL3-201ENST00000249007 PPTC7Q8NI37 304 aa14.08□□□□□ -0.16
RFPL3-201ENST00000249007 EMID1Q96A84 441 aaPredicted RBP14.08□□□□□ -0.16
RFPL3-201ENST00000249007 PLVAPQ9BX97 442 aa14.08□□□□□ -0.16
RFPL3-201ENST00000249007 BARX2Q9UMQ3 279 aaPredicted RBP14.08□□□□□ -0.16
RFPL3-201ENST00000249007 ATRXP46100 2492 aa14.08□□□□□ -0.16
RFPL3-201ENST00000249007 NMT2O60551 498 aa14.07□□□□□ -0.16
RFPL3-201ENST00000249007 ADGRD2Q7Z7M1 963 aa14.07□□□□□ -0.16
RFPL3-201ENST00000249007 APPBP2Q92624 585 aa14.07□□□□□ -0.16
RFPL3-201ENST00000249007 APBB2Q92870 758 aa14.07□□□□□ -0.16
RFPL3-201ENST00000249007 OSBPL7Q9BZF2 842 aa14.07□□□□□ -0.16
RFPL3-201ENST00000249007 PLAGL2Q9UPG8 496 aa14.07□□□□□ -0.16
RFPL3-201ENST00000249007 MAP1BP46821 2468 aaKnown RBP14.07□□□□□ -0.16
RFPL3-201ENST00000249007 KIAA1217Q5T5P2 1943 aa14.07□□□□□ -0.16
RFPL3-201ENST00000249007 TSPY2A6NKD2 308 aa14.06□□□□□ -0.16
RFPL3-201ENST00000249007 GLP2RO95838 553 aa14.06□□□□□ -0.16
RFPL3-201ENST00000249007 RLBP1P12271 317 aa14.06□□□□□ -0.16
RFPL3-201ENST00000249007 ATF7P17544 494 aaPredicted RBP14.06□□□□□ -0.16
RFPL3-201ENST00000249007 NRIP1P48552 1158 aa14.06□□□□□ -0.16
RFPL3-201ENST00000249007 LAMC2Q13753 1193 aa14.06□□□□□ -0.16
RFPL3-201ENST00000249007 DGLUCYQ7Z3D6 616 aa14.06□□□□□ -0.16
RFPL3-201ENST00000249007 IFNL3Q8IZI9 196 aa14.06□□□□□ -0.16
RFPL3-201ENST00000249007 TMEM105Q8N8V8 129 aa14.06□□□□□ -0.16
RFPL3-201ENST00000249007 ATP6V0A1Q93050 837 aa14.06□□□□□ -0.16
RFPL3-201ENST00000249007 NACAP1Q9BZK3 213 aa14.06□□□□□ -0.16
RFPL3-201ENST00000249007 IL17RBQ9NRM6 502 aa14.06□□□□□ -0.16
RFPL3-201ENST00000249007 DDX41Q9UJV9 622 aaKnown RBP14.06□□□□□ -0.16
RFPL3-201ENST00000249007 CAND2O75155 1236 aa14.06□□□□□ -0.16
RFPL3-201ENST00000249007 BTG3Q14201 252 aaPredicted RBP14.06□□□□□ -0.16
RFPL3-201ENST00000249007 STXBP2Q15833 593 aa14.06□□□□□ -0.16
RFPL3-201ENST00000249007 RBM23Q86U06 439 aaKnown RBP14.06□□□□□ -0.16
RFPL3-201ENST00000249007 RC3H2Q9HBD1 1191 aaKnown RBP14.06□□□□□ -0.16
RFPL3-201ENST00000249007 GPCPD1Q9NPB8 672 aa14.06□□□□□ -0.16
RFPL3-201ENST00000249007 FRMPD2Q68DX3 1309 aaPredicted RBP14.05□□□□□ -0.16
RFPL3-201ENST00000249007 WDR19Q8NEZ3 1342 aa14.05□□□□□ -0.16
RFPL3-201ENST00000249007 C17orf102A2RUQ5 167 aa14.05□□□□□ -0.16
RFPL3-201ENST00000249007 PATL2C9JE40 543 aaKnown RBP14.05□□□□□ -0.16
RFPL3-201ENST00000249007 PPFIA4O75335 1185 aa14.05□□□□□ -0.16
RFPL3-201ENST00000249007 HOXD8P13378 290 aaPredicted RBP14.05□□□□□ -0.16
RFPL3-201ENST00000249007 DNAJB1P25685 340 aa14.05□□□□□ -0.16
RFPL3-201ENST00000249007 PPARAQ07869 468 aa14.05□□□□□ -0.16
RFPL3-201ENST00000249007 NSUN6Q8TEA1 469 aaKnown RBP14.05□□□□□ -0.16
RFPL3-201ENST00000249007 SUSD6Q92537 303 aa14.05□□□□□ -0.16
RFPL3-201ENST00000249007 P2RX5Q93086 422 aa14.05□□□□□ -0.16
RFPL3-201ENST00000249007 RMDN1Q96DB5 314 aa14.05□□□□□ -0.16
RFPL3-201ENST00000249007 MRVI1Q9Y6F6 885 aa14.05□□□□□ -0.16
RFPL3-201ENST00000249007 OTOGLQ3ZCN5 2332 aa14.05□□□□□ -0.16
RFPL3-201ENST00000249007 MYH7BA7E2Y1 1941 aa14.04□□□□□ -0.16
RFPL3-201ENST00000249007 MYO10Q9HD67 2058 aa14.04□□□□□ -0.16
RFPL3-201ENST00000249007 RAB11FIP3O75154 756 aa14.04□□□□□ -0.16
RFPL3-201ENST00000249007 ITGB1P05556 798 aa14.04□□□□□ -0.16
RFPL3-201ENST00000249007 RGS22Q8NE09 1264 aa14.04□□□□□ -0.16
RFPL3-201ENST00000249007 IWS1Q96ST2 819 aa14.04□□□□□ -0.16
RFPL3-201ENST00000249007 NAPBQ9H115 298 aa14.04□□□□□ -0.16
RFPL3-201ENST00000249007 TTC3P53804 2025 aa14.03□□□□□ -0.16
RFPL3-201ENST00000249007 M0R2C6 588 aa14.03□□□□□ -0.16
RFPL3-201ENST00000249007 RNF113AO15541 343 aaKnown RBP14.03□□□□□ -0.16
RFPL3-201ENST00000249007 TREHO43280 583 aa14.03□□□□□ -0.16
RFPL3-201ENST00000249007 USH1GQ495M9 461 aa14.03□□□□□ -0.16
RFPL3-201ENST00000249007 NAALADL2Q58DX5 795 aa14.03□□□□□ -0.16
RFPL3-201ENST00000249007 KBTBD3Q8NAB2 608 aa14.03□□□□□ -0.16
RFPL3-201ENST00000249007 KREMEN2Q8NCW0 462 aa14.03□□□□□ -0.16
RFPL3-201ENST00000249007 SPPL3Q8TCT6 385 aa14.03□□□□□ -0.16
RFPL3-201ENST00000249007 TAAR1Q96RJ0 339 aa14.03□□□□□ -0.16
RFPL3-201ENST00000249007 RMDN3Q96TC7 470 aa14.03□□□□□ -0.16
RFPL3-201ENST00000249007 RANBP6O60518 1105 aaKnown RBP14.02□□□□□ -0.16
RFPL3-201ENST00000249007 HMMRO75330 724 aa14.02□□□□□ -0.16
RFPL3-201ENST00000249007 ZFYP08048 801 aaPredicted RBP14.02□□□□□ -0.16
RFPL3-201ENST00000249007 SP100P23497 879 aaPredicted RBP14.02□□□□□ -0.16
RFPL3-201ENST00000249007 HOXC8P31273 242 aa14.02□□□□□ -0.16
RFPL3-201ENST00000249007 MTMR3Q13615 1198 aa14.02□□□□□ -0.16
RFPL3-201ENST00000249007 HSDL1Q3SXM5 330 aa14.02□□□□□ -0.16
RFPL3-201ENST00000249007 ASTLQ6HA08 431 aaPredicted RBP14.02□□□□□ -0.16
RFPL3-201ENST00000249007 UBALD2Q8IYN6 164 aa14.02□□□□□ -0.16
RFPL3-201ENST00000249007 ZNF689Q96CS4 500 aaPredicted RBP14.02□□□□□ -0.16
RFPL3-201ENST00000249007 SPATA33Q96N06 139 aa14.02□□□□□ -0.16
RFPL3-201ENST00000249007 CNTNAP3BQ96NU0 1288 aa14.02□□□□□ -0.16
RFPL3-201ENST00000249007 CNTNAP3Q9BZ76 1288 aa14.02□□□□□ -0.16
RFPL3-201ENST00000249007 TLE6Q9H808 572 aa14.02□□□□□ -0.16
RFPL3-201ENST00000249007 COL20A1Q9P218 1284 aa14.02□□□□□ -0.16
RFPL3-201ENST00000249007 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.02□□□□□ -0.16
RFPL3-201ENST00000249007 CCER2I3L3R5 266 aa14.01□□□□□ -0.17
RFPL3-201ENST00000249007 SORBS3O60504 671 aa14.01□□□□□ -0.17
RFPL3-201ENST00000249007 EIF3JO75822 258 aaKnown RBP14.01□□□□□ -0.17
RFPL3-201ENST00000249007 SMIM10L2AP0DMW4 78 aa14.01□□□□□ -0.17
RFPL3-201ENST00000249007 SMIM10L2BP0DMW5 78 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms