RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 MTIF3Q9H2K0 278 aaKnown RBP7.95□□□□□ -1.14
SSR1-201ENST00000244763 TBC1D22BQ9NU19 505 aa7.95□□□□□ -1.14
SSR1-201ENST00000244763 IFNAR1P17181 557 aa7.95□□□□□ -1.14
SSR1-201ENST00000244763 LIFRP42702 1097 aa7.95□□□□□ -1.14
SSR1-201ENST00000244763 DNAJC24Q6P3W2 148 aa7.95□□□□□ -1.14
SSR1-201ENST00000244763 APOA5Q6Q788 366 aa7.95□□□□□ -1.14
SSR1-201ENST00000244763 FASTKD5Q7L8L6 764 aaKnown RBP7.95□□□□□ -1.14
SSR1-201ENST00000244763 SPDYE1Q8NFV5 336 aaPredicted RBP7.95□□□□□ -1.14
SSR1-201ENST00000244763 EDEM3Q9BZQ6 932 aa7.95□□□□□ -1.14
SSR1-201ENST00000244763 NDUFB9Q9Y6M9 179 aa7.95□□□□□ -1.14
SSR1-201ENST00000244763 HECW2Q9P2P5 1572 aa7.95□□□□□ -1.14
SSR1-201ENST00000244763 PRPF3O43395 683 aaKnown RBP7.95□□□□□ -1.14
SSR1-201ENST00000244763 CPP00450 1065 aa7.95□□□□□ -1.14
SSR1-201ENST00000244763 TFAMQ00059 246 aaKnown RBP7.95□□□□□ -1.14
SSR1-201ENST00000244763 JADE1Q6IE81 842 aa7.95□□□□□ -1.14
SSR1-201ENST00000244763 TRMT44Q8IYL2 757 aaKnown RBP7.95□□□□□ -1.14
SSR1-201ENST00000244763 PPP2R3CQ969Q6 453 aa7.95□□□□□ -1.14
SSR1-201ENST00000244763 RAD17O75943 681 aa7.95□□□□□ -1.14
SSR1-201ENST00000244763 IL9RQ01113 521 aa7.95□□□□□ -1.14
SSR1-201ENST00000244763 SEPT12Q8IYM1 358 aa7.95□□□□□ -1.14
SSR1-201ENST00000244763 CMTR1Q8N1G2 835 aaKnown RBP7.95□□□□□ -1.14
SSR1-201ENST00000244763 GPKOWQ92917 476 aaPredicted RBP eCLIP7.95□□□□□ -1.142e-15■□□□□ 9.4
SSR1-201ENST00000244763 HPCAL4Q9UM19 191 aa7.95□□□□□ -1.14
SSR1-201ENST00000244763 USP17L5A8MUK1 530 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 DDX5P17844 614 aaKnown RBP7.94□□□□□ -1.14
SSR1-201ENST00000244763 SPICE1Q8N0Z3 855 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 PGBD1Q96JS3 809 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 NUDCD1Q96RS6 583 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 RASSF4Q9H2L5 321 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 EFCAB8A8MWE9 144 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 KLC3Q6P597 504 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 USP17L2Q6R6M4 530 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 MICAL1Q8TDZ2 1067 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 SCINQ9Y6U3 715 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 CDC42BPGQ6DT37 1551 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 RGS12O14924 1447 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 PRPSAP2O60256 369 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 COG7P83436 770 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 MTERF2Q49AM1 385 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 MFSD14CQ5VZR4 134 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 CCNYQ8ND76 341 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 UIMC1Q96RL1 719 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 EFHD1Q9BUP0 239 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 DIS3Q9Y2L1 958 aaKnown RBP7.94□□□□□ -1.14
SSR1-201ENST00000244763 CA4P22748 312 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 ADKP55263 362 aaKnown RBP7.94□□□□□ -1.14
SSR1-201ENST00000244763 MAPK6Q16659 721 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 PCGF5Q86SE9 256 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 ORC6Q9Y5N6 252 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 TXNDC9O14530 226 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 DNAJC8O75937 253 aaPredicted RBP7.94□□□□□ -1.14
SSR1-201ENST00000244763 MESDQ14696 234 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 EDC3Q96F86 508 aaKnown RBP7.94□□□□□ -1.14
SSR1-201ENST00000244763 PALD1Q9ULE6 856 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 ERBB3P21860 1342 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 OVOS2A0A0G2JMS6 1433 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 OVOS2A0A0J9YW53 1432 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 OVOS2Q6IE36 1432 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 ERCC3P19447 782 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 TTLL4Q14679 1199 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 KRT39Q6A163 491 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 SRPRBQ9Y5M8 271 aaKnown RBP7.94□□□□□ -1.14
SSR1-201ENST00000244763 IKBKBO14920 756 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 CDC25BP30305 580 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 TSPY1Q01534 308 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 ZNF653Q96CK0 615 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 MRFAP1L1Q96HT8 127 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 MED4Q9NPJ6 270 aa7.94□□□□□ -1.14
SSR1-201ENST00000244763 TMEM247A6NEH6 219 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 CHEK2O96017 543 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 KCTD6Q8NC69 237 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 TTC37Q6PGP7 1564 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 MMP1P03956 469 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 SERPING1P05155 500 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 SCRN1Q12765 414 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 FAM20AQ96MK3 541 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 MAGEB5Q9BZ81 275 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 IRAK4Q9NWZ3 460 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 PALLDQ8WX93 1383 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 SFNP31947 248 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 PPP1R18Q6NYC8 613 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.93□□□□□ -1.14
SSR1-201ENST00000244763 LMBRD1Q9NUN5 540 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 KCNH4Q9UQ05 1017 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 PTCH1Q13635 1447 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 MXI1P50539 228 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 TTC13Q8NBP0 860 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 CARMIL3Q8ND23 1372 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 DDX50Q9BQ39 737 aaKnown RBP7.93□□□□□ -1.14
SSR1-201ENST00000244763 BRIP1Q9BX63 1249 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 SEL1LQ9UBV2 794 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 ABCA8O94911 1581 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.93□□□□□ -1.148e-6■□□□□ 10.5
SSR1-201ENST00000244763 ARAP3Q8WWN8 1544 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 MMP10P09238 476 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 PHKA2P46019 1235 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 CDK8P49336 464 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 NDUFA8P51970 172 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 LRRC31Q6UY01 552 aa7.93□□□□□ -1.14
SSR1-201ENST00000244763 LRRC8AQ8IWT6 810 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms