RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 BASP1P80723 227 aaKnown RBP8.15□□□□□ -1.1
RIF1-201ENST00000243326 FAM26FQ5R3K3 315 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 TRIM51Q9BSJ1 452 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 ATXN7L3BQ96GX2 97 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 PRMT1Q99873 361 aaKnown RBP8.15□□□□□ -1.1
RIF1-201ENST00000243326 TEX13AQ9BXU3 409 aaPredicted RBP8.15□□□□□ -1.1
RIF1-201ENST00000243326 ADGRL2O95490 1459 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 GNL1P36915 607 aaPredicted RBP8.15□□□□□ -1.1
RIF1-201ENST00000243326 TMTC3Q6ZXV5 915 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 NME8Q8N427 588 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 UHRF1BP1LA0JNW5 1464 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 STAT3P40763 770 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 EXOC1LA0A1B0GW35 172 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 MMP1P03956 469 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 NUB1Q9Y5A7 615 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 RPAP1Q9BWH6 1393 aaPredicted RBP8.15□□□□□ -1.1
RIF1-201ENST00000243326 MED23Q9ULK4 1368 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 FGGP02679 453 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 OLFML2BQ68BL8 750 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 ZNF507Q8TCN5 953 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 PIGOQ8TEQ8 1089 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 TNRQ92752 1358 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 TBC1D10CQ8IV04 446 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 IP6K1Q92551 441 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 ABHD10Q9NUJ1 306 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 BTG4Q9NY30 223 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 FBXL5Q9UKA1 691 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 MAST1Q9Y2H9 1570 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 MT-ND3P03897 115 aa8.15□□□□□ -1.11
RIF1-201ENST00000243326 GTF2IP78347 998 aa8.15□□□□□ -1.11
RIF1-201ENST00000243326 CTTNQ14247 550 aaKnown RBP8.15□□□□□ -1.11
RIF1-201ENST00000243326 PNMA1Q8ND90 353 aa8.15□□□□□ -1.11
RIF1-201ENST00000243326 TTC1Q99614 292 aa8.15□□□□□ -1.11
RIF1-201ENST00000243326 PCDHA12Q9UN75 941 aa8.15□□□□□ -1.11
RIF1-201ENST00000243326 IL2RBP14784 551 aa8.15□□□□□ -1.11
RIF1-201ENST00000243326 CTSWP56202 376 aa8.15□□□□□ -1.11
RIF1-201ENST00000243326 DEUP1Q05D60 604 aa8.15□□□□□ -1.11
RIF1-201ENST00000243326 DISC1Q9NRI5 854 aa8.15□□□□□ -1.11
RIF1-201ENST00000243326 ZSCAN20P17040 1043 aaPredicted RBP8.15□□□□□ -1.11
RIF1-201ENST00000243326 WDR62O43379 1518 aa8.15□□□□□ -1.11
RIF1-201ENST00000243326 MYH10P35580 1976 aa8.15□□□□□ -1.11
RIF1-201ENST00000243326 LRRC53A6NM62 1247 aa8.15□□□□□ -1.11
RIF1-201ENST00000243326 KLRF2D3W0D1 207 aa8.15□□□□□ -1.11
RIF1-201ENST00000243326 RAD17O75943 681 aa8.15□□□□□ -1.11
RIF1-201ENST00000243326 AFPP02771 609 aaKnown RBP8.15□□□□□ -1.11
RIF1-201ENST00000243326 ECE1P42892 770 aa8.15□□□□□ -1.11
RIF1-201ENST00000243326 FMR1Q06787 632 aaKnown RBP eCLIP8.15□□□□□ -1.111e-6■■■□□ 15.5
RIF1-201ENST00000243326 CDO1Q16878 200 aa8.15□□□□□ -1.11
RIF1-201ENST00000243326 APOA5Q6Q788 366 aa8.15□□□□□ -1.11
RIF1-201ENST00000243326 MAP4K1Q92918 833 aa8.15□□□□□ -1.11
RIF1-201ENST00000243326 ALAS1P13196 640 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 MDM1Q8TC05 714 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 TBCKQ8TEA7 893 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 PGRMC1O00264 195 aaKnown RBP8.14□□□□□ -1.11
RIF1-201ENST00000243326 RHBDL2Q9NX52 303 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 ESRRAP11474 423 aaPredicted RBP8.14□□□□□ -1.11
RIF1-201ENST00000243326 CALN1Q9BXU9 219 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 H7C1D1 291 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 INHBAP08476 426 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 DNAAF5Q86Y56 855 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 NUDCD3Q8IVD9 361 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 CLRN2A0PK11 232 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 UBAP1LF5GYI3 381 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 USP17L2Q6R6M4 530 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 RNF207Q6ZRF8 634 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 FMR1NBQ8N0W7 255 aaPredicted RBP8.14□□□□□ -1.11
RIF1-201ENST00000243326 ZBTB10Q96DT7 871 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 MPHOSPH6Q99547 160 aaKnown RBP8.14□□□□□ -1.11
RIF1-201ENST00000243326 KLC4Q9NSK0 619 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 CCDC151A5D8V7 595 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 RASGRF2O14827 1237 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 GDF11O95390 407 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 HOXA13P31271 388 aaPredicted RBP8.14□□□□□ -1.11
RIF1-201ENST00000243326 SEC24CP53992 1094 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 TAF12Q16514 161 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 PIGSQ96S52 555 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 XKR9Q5GH70 373 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 RESP18Q5W5W9 173 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 ZMYM1Q5SVZ6 1142 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 LONP2Q86WA8 852 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 DCAF5Q96JK2 942 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 NXF1Q9UBU9 619 aaKnown RBP8.14□□□□□ -1.11
RIF1-201ENST00000243326 DARS2Q6PI48 645 aaKnown RBP8.14□□□□□ -1.11
RIF1-201ENST00000243326 NOA1Q8NC60 698 aaKnown RBP8.14□□□□□ -1.11
RIF1-201ENST00000243326 CXorf56Q9H5V9 222 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 ECEL1O95672 775 aa8.14□□□□□ -1.11
RIF1-201ENST00000243326 DDX42Q86XP3 938 aaKnown RBP eCLIP8.14□□□□□ -1.11
RIF1-201ENST00000243326 NOP56O00567 594 aaKnown RBP8.13□□□□□ -1.11
RIF1-201ENST00000243326 PHBP35232 272 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 LIG4P49917 911 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 HSPA2P54652 639 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 ODR4Q5SWX8 454 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 ZMYND12Q9H0C1 365 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 GOLPH3Q9H4A6 298 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 KRT82Q9NSB4 513 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 STAP2Q9UGK3 403 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 LCMT1Q9UIC8 334 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 SAAL1Q96ER3 474 aa8.13□□□□□ -1.11
RIF1-201ENST00000243326 TRIM56Q9BRZ2 755 aaKnown RBP8.13□□□□□ -1.11
RIF1-201ENST00000243326 RWDD2AQ9UIY3 292 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms