RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 DNAJC21Q5F1R6 531 aaKnown RBP13.21□□□□□ -0.29
SEC61A1-201ENST00000243253 TPTE2Q6XPS3 522 aa13.21□□□□□ -0.29
SEC61A1-201ENST00000243253 GBP6Q6ZN66 633 aa13.21□□□□□ -0.29
SEC61A1-201ENST00000243253 LARP4BQ92615 738 aaKnown RBP13.21□□□□□ -0.29
SEC61A1-201ENST00000243253 CDK5RAP3Q96JB5 506 aa13.21□□□□□ -0.29
SEC61A1-201ENST00000243253 ANKRD2Q9GZV1 360 aa13.21□□□□□ -0.29
SEC61A1-201ENST00000243253 KCTD10Q9H3F6 313 aa13.21□□□□□ -0.29
SEC61A1-201ENST00000243253 MMRN2Q9H8L6 949 aa13.21□□□□□ -0.29
SEC61A1-201ENST00000243253 RTCBQ9Y3I0 505 aaKnown RBP13.21□□□□□ -0.29
SEC61A1-201ENST00000243253 IGKV6D-41A0A0C4DH26 115 aa13.21□□□□□ -0.3
SEC61A1-201ENST00000243253 H0YGN5 161 aa13.21□□□□□ -0.3
SEC61A1-201ENST00000243253 RHBDL3P58872 404 aa13.21□□□□□ -0.3
SEC61A1-201ENST00000243253 APBA1Q02410 837 aa13.21□□□□□ -0.3
SEC61A1-201ENST00000243253 KCNV1Q6PIU1 500 aa13.21□□□□□ -0.3
SEC61A1-201ENST00000243253 TADA2BQ86TJ2 420 aa13.21□□□□□ -0.3
SEC61A1-201ENST00000243253 SUGP1Q8IWZ8 645 aaKnown RBP13.21□□□□□ -0.3
SEC61A1-201ENST00000243253 NFS1Q9Y697 457 aa13.21□□□□□ -0.3
SEC61A1-201ENST00000243253 BTNL10A8MVZ5 291 aa13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 CARSP49589 748 aaKnown RBP13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 SOGA3Q5TF21 947 aa13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 IQCEQ6IPM2 695 aa13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 FAM196AQ6ZSG2 479 aa13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 TMC4Q7Z404 712 aa13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 CCDC84Q86UT8 332 aaPredicted RBP13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 CRACR2AQ9BSW2 395 aa13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 CAPS2Q9BXY5 557 aa13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 GANQ9H2C0 597 aa13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 FRMD3A2A2Y4 597 aa13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 TDP2O95551 362 aa13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 CDK8P49336 464 aa13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 RRAGAQ7L523 313 aa13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 TEX11Q8IYF3 940 aa13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 PPM1EQ8WY54 764 aa13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 SMARCC1Q92922 1105 aaPredicted RBP13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 PIGSQ96S52 555 aa13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 SPATA31A5Q5VU36 1347 aa13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 SPATA31A7Q8IWB4 1347 aa13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 POTEMA6NI47 508 aa13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 UBAP1LF5GYI3 381 aa13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 HOXA7P31268 230 aaPredicted RBP13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 GTF2IP78347 998 aa13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 RASSF7Q02833 373 aa13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 SPTY2D1Q68D10 685 aaPredicted RBP13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 PROM2Q8N271 834 aa13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 DDX12PQ92771 950 aa13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 AIPL1Q9NZN9 384 aa13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 CEP72Q9P209 647 aa13.2□□□□□ -0.3
SEC61A1-201ENST00000243253 A0A087WUV0 522 aaPredicted RBP13.19□□□□□ -0.3
SEC61A1-201ENST00000243253 KRT14P02533 472 aa13.19□□□□□ -0.3
SEC61A1-201ENST00000243253 AMPD3Q01432 767 aa13.19□□□□□ -0.3
SEC61A1-201ENST00000243253 PSMD2Q13200 908 aa13.19□□□□□ -0.3
SEC61A1-201ENST00000243253 SPA17Q15506 151 aa13.19□□□□□ -0.3
SEC61A1-201ENST00000243253 KDM7AQ6ZMT4 941 aa13.19□□□□□ -0.3
SEC61A1-201ENST00000243253 SV2BQ7L1I2 683 aa13.19□□□□□ -0.3
SEC61A1-201ENST00000243253 TRIM59Q8IWR1 403 aa13.19□□□□□ -0.3
SEC61A1-201ENST00000243253 PDHBP11177 359 aa13.19□□□□□ -0.3
SEC61A1-201ENST00000243253 KLRC1P26715 233 aa13.19□□□□□ -0.3
SEC61A1-201ENST00000243253 PPP4R3AQ6IN85 833 aa13.19□□□□□ -0.3
SEC61A1-201ENST00000243253 SLC30A10Q6XR72 485 aa13.19□□□□□ -0.3
SEC61A1-201ENST00000243253 IPO4Q8TEX9 1081 aaKnown RBP13.19□□□□□ -0.3
SEC61A1-201ENST00000243253 CASKIN2Q8WXE0 1202 aa13.19□□□□□ -0.3
SEC61A1-201ENST00000243253 CEP95Q96GE4 821 aa13.19□□□□□ -0.3
SEC61A1-201ENST00000243253 GPR75-ASB3A0A0A6YYF3 556 aa13.19□□□□□ -0.3
SEC61A1-201ENST00000243253 USO1O60763 962 aaKnown RBP13.19□□□□□ -0.3
SEC61A1-201ENST00000243253 CCT5P48643 541 aa13.19□□□□□ -0.3
SEC61A1-201ENST00000243253 TBC1D10BQ4KMP7 808 aaPredicted RBP13.19□□□□□ -0.3
SEC61A1-201ENST00000243253 NELFCDQ8IXH7 590 aa13.19□□□□□ -0.3
SEC61A1-201ENST00000243253 DEF6Q9H4E7 631 aa13.19□□□□□ -0.3
SEC61A1-201ENST00000243253 RNF14Q9UBS8 474 aa13.19□□□□□ -0.3
SEC61A1-201ENST00000243253 NARFQ9UHQ1 456 aa13.19□□□□□ -0.3
SEC61A1-201ENST00000243253 FAM169AQ9Y6X4 670 aa13.19□□□□□ -0.3
SEC61A1-201ENST00000243253 GRID2IPA4D2P6 1211 aa13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 USP17L5A8MUK1 530 aa13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 CES2O00748 559 aa13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 MFSD14BQ5SR56 506 aa13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 BARGINQ6ZT62 677 aa13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 LRRC57Q8N9N7 239 aa13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 PACSIN1Q9BY11 444 aa13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 RIC8AQ9NPQ8 531 aa13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 IPO7O95373 1038 aaKnown RBP13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 GNA11P29992 359 aa13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 HOXD13P35453 343 aa13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 MAGEA1P43355 309 aa13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 GABPAQ06546 454 aa13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 UBE2SQ16763 222 aa13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 FAM83BQ5T0W9 1011 aa13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 ICE2Q659A1 982 aa13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 IRF2BP2Q7Z5L9 587 aa13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 CNBD1Q8NA66 436 aa13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 C6orf50Q9HD87 102 aa13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 A0A087X0T9 212 aa13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 BUB1O43683 1085 aa13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 FAM228BP0C875 321 aa13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 ITGB3BPQ13352 177 aaPredicted RBP13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 SLC18A3Q16572 532 aa13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 DNAAF5Q86Y56 855 aa13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 SH2D3CQ8N5H7 860 aa13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 ARHGEF1Q92888 912 aaKnown RBP13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 SEC63Q9UGP8 760 aaKnown RBP13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 ATP6V0A2Q9Y487 856 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms