RNA–Protein interactions for RNA: ENST00000236017.5

APH1A-201, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-201ENST00000236017 TMCO2Q7Z6W1 182 aaPredicted RBP20.83■□□□□ 0.93
APH1A-201ENST00000236017 ZNF654Q8IZM8 581 aa20.83■□□□□ 0.93
APH1A-201ENST00000236017 LY9Q9HBG7 655 aa20.83■□□□□ 0.93
APH1A-201ENST00000236017 LMCD1Q9NZU5 365 aa20.83■□□□□ 0.93
APH1A-201ENST00000236017 MYH6P13533 1939 aa20.82■□□□□ 0.92
APH1A-201ENST00000236017 LCHNA4D1U4 455 aa20.82■□□□□ 0.92
APH1A-201ENST00000236017 SMIM10L2AP0DMW4 78 aa20.82■□□□□ 0.92
APH1A-201ENST00000236017 SMIM10L2BP0DMW5 78 aa20.82■□□□□ 0.92
APH1A-201ENST00000236017 BMP1P13497 986 aa20.82■□□□□ 0.92
APH1A-201ENST00000236017 MBTPS1Q14703 1052 aa20.82■□□□□ 0.92
APH1A-201ENST00000236017 TCTN1Q2MV58 587 aa20.82■□□□□ 0.92
APH1A-201ENST00000236017 KRT40Q6A162 431 aa20.82■□□□□ 0.92
APH1A-201ENST00000236017 NLRX1Q86UT6 975 aa20.82■□□□□ 0.92
APH1A-201ENST00000236017 TET1Q8NFU7 2136 aa20.82■□□□□ 0.92
APH1A-201ENST00000236017 RNPEPQ9H4A4 650 aa20.82■□□□□ 0.92
APH1A-201ENST00000236017 BCAS3Q9H6U6 928 aa20.82■□□□□ 0.92
APH1A-201ENST00000236017 TRIP12Q14669 1992 aaPredicted RBP20.81■□□□□ 0.92
APH1A-201ENST00000236017 CCDC69A6NI79 296 aa20.81■□□□□ 0.92
APH1A-201ENST00000236017 PIK3CDO00329 1044 aa20.81■□□□□ 0.92
APH1A-201ENST00000236017 PRC1O43663 620 aa20.81■□□□□ 0.92
APH1A-201ENST00000236017 AMHP03971 560 aa20.81■□□□□ 0.92
APH1A-201ENST00000236017 MCM5P33992 734 aa20.81■□□□□ 0.92
APH1A-201ENST00000236017 IRX6P78412 446 aaPredicted RBP20.81■□□□□ 0.92
APH1A-201ENST00000236017 TFF2Q03403 129 aa20.81■□□□□ 0.92
APH1A-201ENST00000236017 USP17L6PQ6QN14 398 aa20.81■□□□□ 0.92
APH1A-201ENST00000236017 DBF4BQ8NFT6 615 aa20.81■□□□□ 0.92
APH1A-201ENST00000236017 TMEM87BQ96K49 555 aa20.81■□□□□ 0.92
APH1A-201ENST00000236017 TGS1Q96RS0 853 aaKnown RBP20.81■□□□□ 0.92
APH1A-201ENST00000236017 GPR20Q99678 358 aa20.81■□□□□ 0.92
APH1A-201ENST00000236017 SENP7Q9BQF6 1050 aa20.81■□□□□ 0.92
APH1A-201ENST00000236017 MYL10Q9BUA6 226 aa20.81■□□□□ 0.92
APH1A-201ENST00000236017 ZNF215Q9UL58 517 aaPredicted RBP20.81■□□□□ 0.92
APH1A-201ENST00000236017 TANC1Q9C0D5 1861 aa20.81■□□□□ 0.92
APH1A-201ENST00000236017 TREHO43280 583 aa20.8■□□□□ 0.92
APH1A-201ENST00000236017 LPXNO60711 386 aa20.8■□□□□ 0.92
APH1A-201ENST00000236017 CAND2O75155 1236 aa20.8■□□□□ 0.92
APH1A-201ENST00000236017 HOXC8P31273 242 aa20.8■□□□□ 0.92
APH1A-201ENST00000236017 ERVK-21P61565 698 aa20.8■□□□□ 0.92
APH1A-201ENST00000236017 SEMA3FQ13275 785 aa20.8■□□□□ 0.92
APH1A-201ENST00000236017 PCNX4Q63HM2 1172 aa20.8■□□□□ 0.92
APH1A-201ENST00000236017 FAM117BQ6P1L5 589 aa20.8■□□□□ 0.92
APH1A-201ENST00000236017 GIMAP8Q8ND71 665 aaPredicted RBP20.8■□□□□ 0.92
APH1A-201ENST00000236017 HLA-CQ95604 372 aa20.8■□□□□ 0.92
APH1A-201ENST00000236017 INSL6Q9Y581 213 aa20.8■□□□□ 0.92
APH1A-201ENST00000236017 SPTBN5Q9NRC6 3674 aaKnown RBP20.8■□□□□ 0.92
APH1A-201ENST00000236017 MEIS2O14770 477 aa20.79■□□□□ 0.92
APH1A-201ENST00000236017 CALM1P0DP23 149 aa20.79■□□□□ 0.92
APH1A-201ENST00000236017 CALM2P0DP24 149 aa20.79■□□□□ 0.92
APH1A-201ENST00000236017 CALM3P0DP25 149 aa20.79■□□□□ 0.92
APH1A-201ENST00000236017 UTP14CQ5TAP6 766 aaKnown RBP20.79■□□□□ 0.92
APH1A-201ENST00000236017 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.79■□□□□ 0.924e-6■□□□□ 8.4
APH1A-201ENST00000236017 SPRED2Q7Z698 418 aa20.79■□□□□ 0.92
APH1A-201ENST00000236017 SEPT8Q92599 483 aa20.79■□□□□ 0.92
APH1A-201ENST00000236017 BAZ2BQ9UIF8 2168 aaKnown RBP20.78■□□□□ 0.92
APH1A-201ENST00000236017 LINC01553A4QN01 128 aa20.78■□□□□ 0.92
APH1A-201ENST00000236017 SH2B2O14492 632 aaPredicted RBP20.78■□□□□ 0.92
APH1A-201ENST00000236017 LIFRP42702 1097 aa20.78■□□□□ 0.92
APH1A-201ENST00000236017 PLEKHG4Q58EX7 1191 aa20.78■□□□□ 0.92
APH1A-201ENST00000236017 MYOCDQ8IZQ8 938 aa20.78■□□□□ 0.92
APH1A-201ENST00000236017 SRBD1Q8N5C6 995 aaKnown RBP20.78■□□□□ 0.92
APH1A-201ENST00000236017 CDHR1Q96JP9 859 aa20.78■□□□□ 0.92
APH1A-201ENST00000236017 PSTPIP2Q9H939 334 aa20.78■□□□□ 0.92
APH1A-201ENST00000236017 SUGCTQ9HAC7 445 aa20.78■□□□□ 0.92
APH1A-201ENST00000236017 SETD4Q9NVD3 440 aa20.78■□□□□ 0.92
APH1A-201ENST00000236017 MTUS1Q9ULD2 1270 aa20.78■□□□□ 0.92
APH1A-201ENST00000236017 PRRC2BQ5JSZ5 2229 aaKnown RBP20.78■□□□□ 0.92
APH1A-201ENST00000236017 CHD7Q9P2D1 2997 aa20.78■□□□□ 0.92
APH1A-201ENST00000236017 PLEKHA8P1O95397 391 aa20.77■□□□□ 0.92
APH1A-201ENST00000236017 KCNQ1P51787 676 aa20.77■□□□□ 0.92
APH1A-201ENST00000236017 GDPD5Q8WTR4 605 aa20.77■□□□□ 0.92
APH1A-201ENST00000236017 LSG1Q9H089 658 aaKnown RBP20.77■□□□□ 0.92
APH1A-201ENST00000236017 SLC12A7Q9Y666 1083 aa20.77■□□□□ 0.92
APH1A-201ENST00000236017 SLC27A2O14975 620 aa20.76■□□□□ 0.91
APH1A-201ENST00000236017 SP4Q02446 784 aa20.76■□□□□ 0.91
APH1A-201ENST00000236017 GPRASP2Q96D09 838 aa20.76■□□□□ 0.91
APH1A-201ENST00000236017 MYH7BA7E2Y1 1941 aa20.76■□□□□ 0.91
APH1A-201ENST00000236017 NRCAMQ92823 1304 aa20.76■□□□□ 0.91
APH1A-201ENST00000236017 CTSHP09668 335 aa20.75■□□□□ 0.91
APH1A-201ENST00000236017 RXRAP19793 462 aa20.75■□□□□ 0.91
APH1A-201ENST00000236017 HTRA4P83105 476 aaPredicted RBP20.75■□□□□ 0.91
APH1A-201ENST00000236017 ARHGAP4P98171 946 aa20.75■□□□□ 0.91
APH1A-201ENST00000236017 CREB3L3Q68CJ9 461 aa20.75■□□□□ 0.91
APH1A-201ENST00000236017 TRIM50Q86XT4 487 aa20.75■□□□□ 0.91
APH1A-201ENST00000236017 CMTR1Q8N1G2 835 aaKnown RBP20.75■□□□□ 0.91
APH1A-201ENST00000236017 NECAB3Q96P71 396 aaPredicted RBP20.75■□□□□ 0.91
APH1A-201ENST00000236017 ESYT1Q9BSJ8 1104 aa20.75■□□□□ 0.91
APH1A-201ENST00000236017 SPDYE3A6NKU9 549 aa20.74■□□□□ 0.91
APH1A-201ENST00000236017 COL9A1P20849 921 aa20.74■□□□□ 0.91
APH1A-201ENST00000236017 MKRN4PQ13434 485 aaPredicted RBP20.74■□□□□ 0.91
APH1A-201ENST00000236017 NECTIN1Q15223 517 aa20.74■□□□□ 0.91
APH1A-201ENST00000236017 SYNE3Q6ZMZ3 975 aa20.74■□□□□ 0.91
APH1A-201ENST00000236017 FANCBQ8NB91 859 aa20.74■□□□□ 0.91
APH1A-201ENST00000236017 FBXO22Q8NEZ5 403 aa20.74■□□□□ 0.91
APH1A-201ENST00000236017 SEPT1Q8WYJ6 367 aa20.74■□□□□ 0.91
APH1A-201ENST00000236017 APBB2Q92870 758 aa20.74■□□□□ 0.91
APH1A-201ENST00000236017 TOP1MTQ969P6 601 aa20.74■□□□□ 0.91
APH1A-201ENST00000236017 MAFGO15525 162 aa20.73■□□□□ 0.91
APH1A-201ENST00000236017 ATP9AO75110 1047 aa20.73■□□□□ 0.91
APH1A-201ENST00000236017 TCF7P36402 384 aaPredicted RBP20.73■□□□□ 0.91
APH1A-201ENST00000236017 ADAM17P78536 824 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms