RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 PALM2Q8IXS6 379 aa18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 SRBD1Q8N5C6 995 aaKnown RBP18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 CPDO75976 1380 aa18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 UBE2Q2LH0YL09 131 aa18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 LMNB1P20700 586 aa18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 PTK2Q05397 1052 aa18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 NNTQ13423 1086 aa18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 MAP7D1Q3KQU3 841 aa18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 IGDCC4Q8TDY8 1250 aa18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 MMS19Q96T76 1030 aa18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 CD209Q9NNX6 404 aa18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 INTS9Q9NV88 658 aaKnown RBP18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 PI4KBQ9UBF8 816 aa18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 TRPC6Q9Y210 931 aa18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 PNMA6FA0A0J9YX94 578 aa18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 GH2P01242 217 aa18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 PPP2R5CQ13362 524 aa18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 CHP1Q99653 195 aa18.66■□□□□ 0.58
SLC1A4-201ENST00000234256 KAZALD1Q96I82 304 aa18.65■□□□□ 0.58
SLC1A4-201ENST00000234256 CD2APQ9Y5K6 639 aa18.65■□□□□ 0.58
SLC1A4-201ENST00000234256 KIAA1210Q9ULL0 1709 aa18.65■□□□□ 0.58
SLC1A4-201ENST00000234256 LRRC53A6NM62 1247 aa18.65■□□□□ 0.58
SLC1A4-201ENST00000234256 N4BP1O75113 896 aaKnown RBP18.65■□□□□ 0.58
SLC1A4-201ENST00000234256 FCER1AP12319 257 aa18.65■□□□□ 0.58
SLC1A4-201ENST00000234256 MAN1A1P33908 653 aa18.65■□□□□ 0.58
SLC1A4-201ENST00000234256 LRRC63Q05C16 580 aa18.65■□□□□ 0.58
SLC1A4-201ENST00000234256 PSMD6Q15008 389 aa18.65■□□□□ 0.58
SLC1A4-201ENST00000234256 CCDC14Q49A88 953 aa18.65■□□□□ 0.58
SLC1A4-201ENST00000234256 SDCCAG8Q86SQ7 713 aaPredicted RBP18.65■□□□□ 0.58
SLC1A4-201ENST00000234256 MAIP1Q8WWC4 291 aa18.65■□□□□ 0.58
SLC1A4-201ENST00000234256 EXOC4Q96A65 974 aa18.65■□□□□ 0.58
SLC1A4-201ENST00000234256 PARVGQ9HBI0 331 aa18.65■□□□□ 0.58
SLC1A4-201ENST00000234256 RAB20Q9NX57 234 aa18.65■□□□□ 0.58
SLC1A4-201ENST00000234256 TDP2O95551 362 aa18.65■□□□□ 0.58
SLC1A4-201ENST00000234256 CCZ1BP86790 482 aa18.65■□□□□ 0.58
SLC1A4-201ENST00000234256 CCZ1P86791 482 aaPredicted RBP18.65■□□□□ 0.58
SLC1A4-201ENST00000234256 TRIP13Q15645 432 aaPredicted RBP18.65■□□□□ 0.58
SLC1A4-201ENST00000234256 CNKSR1Q969H4 720 aa18.65■□□□□ 0.58
SLC1A4-201ENST00000234256 RILPQ96NA2 401 aa18.65■□□□□ 0.58
SLC1A4-201ENST00000234256 KLHL14Q9P2G3 628 aa18.65■□□□□ 0.58
SLC1A4-201ENST00000234256 CPS1P31327 1500 aa18.64■□□□□ 0.58
SLC1A4-201ENST00000234256 EIF2AK2P19525 551 aaKnown RBP18.64■□□□□ 0.58
SLC1A4-201ENST00000234256 YARSP54577 528 aaKnown RBP18.64■□□□□ 0.58
SLC1A4-201ENST00000234256 IGBP1P78318 339 aa18.64■□□□□ 0.58
SLC1A4-201ENST00000234256 NACC1Q96RE7 527 aa18.64■□□□□ 0.58
SLC1A4-201ENST00000234256 FBXO2Q9UK22 296 aaPredicted RBP18.64■□□□□ 0.58
SLC1A4-201ENST00000234256 NRKQ7Z2Y5 1582 aa18.64■□□□□ 0.58
SLC1A4-201ENST00000234256 CTNND1O60716 968 aaKnown RBP18.64■□□□□ 0.57
SLC1A4-201ENST00000234256 SERPING1P05155 500 aa18.64■□□□□ 0.57
SLC1A4-201ENST00000234256 GRIN1Q05586 938 aa18.64■□□□□ 0.57
SLC1A4-201ENST00000234256 CDAN1Q8IWY9 1227 aa18.64■□□□□ 0.57
SLC1A4-201ENST00000234256 CEP170P1Q96L14 293 aa18.64■□□□□ 0.57
SLC1A4-201ENST00000234256 POTEB3A0JP26 581 aa18.64■□□□□ 0.57
SLC1A4-201ENST00000234256 POTECB2RU33 542 aa18.64■□□□□ 0.57
SLC1A4-201ENST00000234256 USP17L10C9JJH3 530 aa18.64■□□□□ 0.57
SLC1A4-201ENST00000234256 TNFAIP1Q13829 316 aa18.64■□□□□ 0.57
SLC1A4-201ENST00000234256 POTEBQ6S5H4 581 aa18.64■□□□□ 0.57
SLC1A4-201ENST00000234256 CEP128Q6ZU80 1094 aa18.64■□□□□ 0.57
SLC1A4-201ENST00000234256 BPIFA3Q9BQP9 254 aa18.64■□□□□ 0.57
SLC1A4-201ENST00000234256 TBK1Q9UHD2 729 aa18.64■□□□□ 0.57
SLC1A4-201ENST00000234256 NCK2O43639 380 aa18.64■□□□□ 0.57
SLC1A4-201ENST00000234256 TMEM191BP0C7N4 346 aa18.64■□□□□ 0.57
SLC1A4-201ENST00000234256 ATF2P15336 505 aa18.64■□□□□ 0.57
SLC1A4-201ENST00000234256 GFPT1Q06210 699 aaPredicted RBP18.64■□□□□ 0.57
SLC1A4-201ENST00000234256 PDIA6Q15084 440 aa18.64■□□□□ 0.57
SLC1A4-201ENST00000234256 UNC13DQ70J99 1090 aa18.64■□□□□ 0.57
SLC1A4-201ENST00000234256 SEPT9Q9UHD8 586 aaPredicted RBP18.64■□□□□ 0.57
SLC1A4-201ENST00000234256 NOVA2Q9UNW9 492 aaKnown RBP18.64■□□□□ 0.57
SLC1A4-201ENST00000234256 SSX2IPQ9Y2D8 614 aa18.64■□□□□ 0.57
SLC1A4-201ENST00000234256 CDHR2Q9BYE9 1310 aa18.64■□□□□ 0.57
SLC1A4-201ENST00000234256 MXI1P50539 228 aa18.63■□□□□ 0.57
SLC1A4-201ENST00000234256 STAT2P52630 851 aa18.63■□□□□ 0.57
SLC1A4-201ENST00000234256 BFSP1Q12934 665 aa18.63■□□□□ 0.57
SLC1A4-201ENST00000234256 EEPD1Q7L9B9 569 aa18.63■□□□□ 0.57
SLC1A4-201ENST00000234256 RPS6KA4O75676 772 aa18.63■□□□□ 0.57
SLC1A4-201ENST00000234256 RFX5P48382 616 aaPredicted RBP18.63■□□□□ 0.57
SLC1A4-201ENST00000234256 SYDE2Q5VT97 1194 aa18.63■□□□□ 0.57
SLC1A4-201ENST00000234256 QTRT2Q9H974 415 aaKnown RBP18.63■□□□□ 0.57
SLC1A4-201ENST00000234256 GOLGA8SH3BPF8 625 aa18.63■□□□□ 0.57
SLC1A4-201ENST00000234256 PDCLQ13371 301 aa18.63■□□□□ 0.57
SLC1A4-201ENST00000234256 CCDC62Q6P9F0 684 aa18.63■□□□□ 0.57
SLC1A4-201ENST00000234256 CLEC10AQ8IUN9 316 aa18.63■□□□□ 0.57
SLC1A4-201ENST00000234256 PASKQ96RG2 1323 aa18.63■□□□□ 0.57
SLC1A4-201ENST00000234256 PALMO75781 387 aa18.62■□□□□ 0.57
SLC1A4-201ENST00000234256 MCF2L2Q86YR7 1114 aa18.62■□□□□ 0.57
SLC1A4-201ENST00000234256 WDR11Q9BZH6 1224 aa18.62■□□□□ 0.57
SLC1A4-201ENST00000234256 PACSIN2Q9UNF0 486 aaPredicted RBP18.62■□□□□ 0.57
SLC1A4-201ENST00000234256 WDR19Q8NEZ3 1342 aa18.62■□□□□ 0.57
SLC1A4-201ENST00000234256 MAPK4P31152 587 aa18.62■□□□□ 0.57
SLC1A4-201ENST00000234256 SEPT2Q15019 361 aa18.62■□□□□ 0.57
SLC1A4-201ENST00000234256 AOC3Q16853 763 aa18.62■□□□□ 0.57
SLC1A4-201ENST00000234256 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.62■□□□□ 0.57
SLC1A4-201ENST00000234256 CAMSAP1Q5T5Y3 1602 aa18.62■□□□□ 0.57
SLC1A4-201ENST00000234256 NFRKBQ6P4R8 1299 aa18.62■□□□□ 0.57
SLC1A4-201ENST00000234256 SFR1Q86XK3 245 aa18.62■□□□□ 0.57
SLC1A4-201ENST00000234256 FXR1P51114 621 aaKnown RBP eCLIP18.62■□□□□ 0.57
SLC1A4-201ENST00000234256 TDRD3Q9H7E2 651 aaKnown RBP18.62■□□□□ 0.57
SLC1A4-201ENST00000234256 PCDHB4Q9Y5E5 795 aa18.62■□□□□ 0.57
SLC1A4-201ENST00000234256 PABPN1LA6NDY0 278 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms