RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 Q4G0T1 1027 aa11.96□□□□□ -0.49
CDCA3-201ENST00000229265 HYIQ5T013 277 aa11.96□□□□□ -0.49
CDCA3-201ENST00000229265 TTBK2Q6IQ55 1244 aa11.96□□□□□ -0.49
CDCA3-201ENST00000229265 GPR142Q7Z601 462 aa11.96□□□□□ -0.49
CDCA3-201ENST00000229265 REPS2Q8NFH8 660 aa11.96□□□□□ -0.49
CDCA3-201ENST00000229265 LPAR1Q92633 364 aa11.96□□□□□ -0.49
CDCA3-201ENST00000229265 DHTKD1Q96HY7 919 aaPredicted RBP11.96□□□□□ -0.49
CDCA3-201ENST00000229265 TMEM60Q9H2L4 133 aa11.96□□□□□ -0.49
CDCA3-201ENST00000229265 EHMT1Q9H9B1 1298 aa11.96□□□□□ -0.49
CDCA3-201ENST00000229265 AS3MTQ9HBK9 375 aa11.96□□□□□ -0.49
CDCA3-201ENST00000229265 PAK6Q9NQU5 681 aaPredicted RBP11.96□□□□□ -0.49
CDCA3-201ENST00000229265 LRWD1Q9UFC0 647 aa11.96□□□□□ -0.49
CDCA3-201ENST00000229265 PCDHA12Q9UN75 941 aa11.96□□□□□ -0.49
CDCA3-201ENST00000229265 MTMR7Q9Y216 660 aa11.96□□□□□ -0.49
CDCA3-201ENST00000229265 A0A087X0B3 334 aa11.95□□□□□ -0.5
CDCA3-201ENST00000229265 PPP1R3GB7ZBB8 358 aa11.95□□□□□ -0.5
CDCA3-201ENST00000229265 CCP110O43303 1012 aa11.95□□□□□ -0.5
CDCA3-201ENST00000229265 COBLO75128 1261 aa11.95□□□□□ -0.5
CDCA3-201ENST00000229265 GJA8P48165 433 aa11.95□□□□□ -0.5
CDCA3-201ENST00000229265 STAT2P52630 851 aa11.95□□□□□ -0.5
CDCA3-201ENST00000229265 IRX3P78415 501 aaPredicted RBP11.95□□□□□ -0.5
CDCA3-201ENST00000229265 CUL4BQ13620 913 aa11.95□□□□□ -0.5
CDCA3-201ENST00000229265 KIF22Q14807 665 aa11.95□□□□□ -0.5
CDCA3-201ENST00000229265 CDC37Q16543 378 aaPredicted RBP11.95□□□□□ -0.5
CDCA3-201ENST00000229265 FILIP1LQ4L180 1135 aa11.95□□□□□ -0.5
CDCA3-201ENST00000229265 MAP3K21Q5TCX8 1036 aa11.95□□□□□ -0.5
CDCA3-201ENST00000229265 JAKMIP3Q5VZ66 844 aa11.95□□□□□ -0.5
CDCA3-201ENST00000229265 KRT79Q5XKE5 535 aa11.95□□□□□ -0.5
CDCA3-201ENST00000229265 KCTD1Q719H9 257 aa11.95□□□□□ -0.5
CDCA3-201ENST00000229265 SV2BQ7L1I2 683 aa11.95□□□□□ -0.5
CDCA3-201ENST00000229265 CCDC112Q8NEF3 446 aa11.95□□□□□ -0.5
CDCA3-201ENST00000229265 ANKRD20A12PQ8NF67 263 aa11.95□□□□□ -0.5
CDCA3-201ENST00000229265 U2AF1L4Q8WU68 220 aaKnown RBP11.95□□□□□ -0.5
CDCA3-201ENST00000229265 CRYGNQ8WXF5 182 aa11.95□□□□□ -0.5
CDCA3-201ENST00000229265 ERCC4Q92889 916 aaPredicted RBP11.95□□□□□ -0.5
CDCA3-201ENST00000229265 DEFB118Q96PH6 123 aa11.95□□□□□ -0.5
CDCA3-201ENST00000229265 CRISPLD2Q9H0B8 497 aa11.95□□□□□ -0.5
CDCA3-201ENST00000229265 RNF208Q9H0X6 261 aa11.95□□□□□ -0.5
CDCA3-201ENST00000229265 HSD3B7Q9H2F3 369 aa11.95□□□□□ -0.5
CDCA3-201ENST00000229265 VCPKMTQ9H867 229 aa11.95□□□□□ -0.5
CDCA3-201ENST00000229265 FANCLQ9NW38 375 aa11.95□□□□□ -0.5
CDCA3-201ENST00000229265 TMOD4Q9NZQ9 345 aa11.95□□□□□ -0.5
CDCA3-201ENST00000229265 MRPL11Q9Y3B7 192 aaKnown RBP11.95□□□□□ -0.5
CDCA3-201ENST00000229265 MYH6P13533 1939 aa11.95□□□□□ -0.5
CDCA3-201ENST00000229265 KDM3AQ9Y4C1 1321 aa11.94□□□□□ -0.5
CDCA3-201ENST00000229265 TMEM232C9JQI7 657 aa11.94□□□□□ -0.5
CDCA3-201ENST00000229265 H0YGN5 161 aa11.94□□□□□ -0.5
CDCA3-201ENST00000229265 MEIS2O14770 477 aa11.94□□□□□ -0.5
CDCA3-201ENST00000229265 PPP1R11O60927 126 aaPredicted RBP11.94□□□□□ -0.5
CDCA3-201ENST00000229265 GJB1P08034 283 aa11.94□□□□□ -0.5
CDCA3-201ENST00000229265 PTGS1P23219 599 aa11.94□□□□□ -0.5
CDCA3-201ENST00000229265 AFMP43652 599 aa11.94□□□□□ -0.5
CDCA3-201ENST00000229265 GCLCP48506 637 aaPredicted RBP11.94□□□□□ -0.5
CDCA3-201ENST00000229265 IRX5P78411 483 aaPredicted RBP11.94□□□□□ -0.5
CDCA3-201ENST00000229265 CACNB2Q08289 660 aaPredicted RBP11.94□□□□□ -0.5
CDCA3-201ENST00000229265 NR1I3Q14994 352 aa11.94□□□□□ -0.5
CDCA3-201ENST00000229265 TMEM132BQ14DG7 1078 aa11.94□□□□□ -0.5
CDCA3-201ENST00000229265 NAALADL2Q58DX5 795 aa11.94□□□□□ -0.5
CDCA3-201ENST00000229265 LBX2Q6XYB7 198 aa11.94□□□□□ -0.5
CDCA3-201ENST00000229265 GIMAP8Q8ND71 665 aaPredicted RBP11.94□□□□□ -0.5
CDCA3-201ENST00000229265 RASGRP4Q8TDF6 673 aa11.94□□□□□ -0.5
CDCA3-201ENST00000229265 FEZ1Q99689 392 aa11.94□□□□□ -0.5
CDCA3-201ENST00000229265 MOV10L1Q9BXT6 1211 aaKnown RBP11.94□□□□□ -0.5
CDCA3-201ENST00000229265 XPO4Q9C0E2 1151 aaKnown RBP11.94□□□□□ -0.5
CDCA3-201ENST00000229265 BMP2KQ9NSY1 1161 aaPredicted RBP11.94□□□□□ -0.5
CDCA3-201ENST00000229265 IFNKQ9P0W0 207 aa11.94□□□□□ -0.5
CDCA3-201ENST00000229265 DDX25Q9UHL0 483 aaKnown RBP11.94□□□□□ -0.5
CDCA3-201ENST00000229265 NFE2L3Q9Y4A8 694 aa11.94□□□□□ -0.5
CDCA3-201ENST00000229265 RIPK3Q9Y572 518 aa11.94□□□□□ -0.5
CDCA3-201ENST00000229265 PLXNA1Q9UIW2 1896 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 ZNF236Q9UL36 1845 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 MCM3APO60318 1980 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 BICDL2A1A5D9 508 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 USP17L15C9J2P7 530 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 USP17L13C9JLJ4 530 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 USP17L11C9JVI0 530 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 USP17L18D6R9N7 530 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 USP17L22D6RA61 530 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 USP17L17D6RBQ6 530 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 USP17L19D6RCP7 530 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 USP17L20D6RJB6 530 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 KIF2AO00139 706 aaPredicted RBP11.93□□□□□ -0.5
CDCA3-201ENST00000229265 ADAMTS3O15072 1205 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 FGFR1OPO95684 399 aaKnown RBP11.93□□□□□ -0.5
CDCA3-201ENST00000229265 GNRH1P01148 92 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 SLC16A2P36021 539 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 TECP42680 631 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 USP14P54578 494 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 SNAP25P60880 206 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 GHRHRQ02643 423 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 USP17L24Q0WX57 530 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 PRAMEF19Q5SWL8 479 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 FAM83BQ5T0W9 1011 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 CDKAL1Q5VV42 579 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 SAMD1Q6SPF0 538 aaPredicted RBP11.93□□□□□ -0.5
CDCA3-201ENST00000229265 FCHSD1Q86WN1 690 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 PRPF38AQ8NAV1 312 aaKnown RBP11.93□□□□□ -0.5
CDCA3-201ENST00000229265 SPC24Q8NBT2 197 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 GPRC5AQ8NFJ5 357 aa11.93□□□□□ -0.5
CDCA3-201ENST00000229265 PRIMPOLQ96LW4 560 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms