RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 EIF2AK1Q9BQI3 630 aaKnown RBP16.62■□□□□ 0.25
CCDC47-201ENST00000225726 ELP3Q9H9T3 547 aa16.62■□□□□ 0.25
CCDC47-201ENST00000225726 BMP2KQ9NSY1 1161 aaPredicted RBP16.62■□□□□ 0.25
CCDC47-201ENST00000225726 MAPK8IP1Q9UQF2 711 aa16.62■□□□□ 0.25
CCDC47-201ENST00000225726 UBIAD1Q9Y5Z9 338 aa16.62■□□□□ 0.25
CCDC47-201ENST00000225726 A0A0G2JMZ2 1700 aa16.62■□□□□ 0.25
CCDC47-201ENST00000225726 PSMD2Q13200 908 aa16.61■□□□□ 0.25
CCDC47-201ENST00000225726 NSMFQ6X4W1 530 aa16.61■□□□□ 0.25
CCDC47-201ENST00000225726 IL31RAQ8NI17 732 aa16.61■□□□□ 0.25
CCDC47-201ENST00000225726 RIT2Q99578 217 aa16.61■□□□□ 0.25
CCDC47-201ENST00000225726 TEKT3Q9BXF9 490 aa16.61■□□□□ 0.25
CCDC47-201ENST00000225726 TEX13BQ9BXU2 312 aa16.61■□□□□ 0.25
CCDC47-201ENST00000225726 EML1O00423 815 aa16.61■□□□□ 0.25
CCDC47-201ENST00000225726 FILIP1Q7Z7B0 1213 aa16.61■□□□□ 0.25
CCDC47-201ENST00000225726 CNKSR2Q8WXI2 1034 aa16.61■□□□□ 0.25
CCDC47-201ENST00000225726 DNAJC19Q96DA6 116 aa16.61■□□□□ 0.25
CCDC47-201ENST00000225726 TUFT1Q9NNX1 390 aa16.61■□□□□ 0.25
CCDC47-201ENST00000225726 DNM3Q9UQ16 869 aa16.61■□□□□ 0.25
CCDC47-201ENST00000225726 ITGB5P18084 799 aa16.61■□□□□ 0.25
CCDC47-201ENST00000225726 STK4Q13043 487 aa16.61■□□□□ 0.25
CCDC47-201ENST00000225726 PGM5Q15124 567 aa16.61■□□□□ 0.25
CCDC47-201ENST00000225726 VSTM4Q8IW00 320 aa16.61■□□□□ 0.25
CCDC47-201ENST00000225726 PROCA1Q8NCQ7 364 aaPredicted RBP16.61■□□□□ 0.25
CCDC47-201ENST00000225726 CTAGE1Q96RT6 745 aa16.61■□□□□ 0.25
CCDC47-201ENST00000225726 PXMP2Q9NR77 195 aa16.61■□□□□ 0.25
CCDC47-201ENST00000225726 A0A0G2JLL6 359 aaPredicted RBP16.6■□□□□ 0.25
CCDC47-201ENST00000225726 SSBP05455 408 aaKnown RBP eCLIP16.6■□□□□ 0.25
CCDC47-201ENST00000225726 FCER1AP12319 257 aa16.6■□□□□ 0.25
CCDC47-201ENST00000225726 SLC12A3P55017 1021 aa16.6■□□□□ 0.25
CCDC47-201ENST00000225726 SPAG1Q07617 926 aa16.6■□□□□ 0.25
CCDC47-201ENST00000225726 EHHADHQ08426 723 aa16.6■□□□□ 0.25
CCDC47-201ENST00000225726 TTLL12Q14166 644 aaPredicted RBP16.6■□□□□ 0.25
CCDC47-201ENST00000225726 EAPPQ56P03 285 aaPredicted RBP16.6■□□□□ 0.25
CCDC47-201ENST00000225726 PRRT2Q7Z6L0 340 aaPredicted RBP16.6■□□□□ 0.25
CCDC47-201ENST00000225726 PNMA8AQ86V59 439 aaPredicted RBP16.6■□□□□ 0.25
CCDC47-201ENST00000225726 GPBP1Q86WP2 473 aa16.6■□□□□ 0.25
CCDC47-201ENST00000225726 INTS13Q9NVM9 706 aa16.6■□□□□ 0.25
CCDC47-201ENST00000225726 SPDYE5A6NIY4 337 aa16.6■□□□□ 0.25
CCDC47-201ENST00000225726 IPO5O00410 1097 aaKnown RBP16.6■□□□□ 0.25
CCDC47-201ENST00000225726 CXCL11O14625 94 aa16.6■□□□□ 0.25
CCDC47-201ENST00000225726 MUTP22033 750 aa16.6■□□□□ 0.25
CCDC47-201ENST00000225726 TREML2Q5T2D2 321 aa16.6■□□□□ 0.25
CCDC47-201ENST00000225726 XRRA1Q6P2D8 792 aa16.6■□□□□ 0.25
CCDC47-201ENST00000225726 JADE2Q9NQC1 790 aa16.6■□□□□ 0.25
CCDC47-201ENST00000225726 A0A1B0GTH6 734 aa16.6■□□□□ 0.25
CCDC47-201ENST00000225726 BICDL2A1A5D9 508 aa16.6■□□□□ 0.25
CCDC47-201ENST00000225726 EIF2AK2P19525 551 aaKnown RBP16.6■□□□□ 0.25
CCDC47-201ENST00000225726 CCNE1P24864 410 aa16.6■□□□□ 0.25
CCDC47-201ENST00000225726 BAATQ14032 418 aaPredicted RBP16.6■□□□□ 0.25
CCDC47-201ENST00000225726 KIAA0895Q8NCT3 520 aa16.6■□□□□ 0.25
CCDC47-201ENST00000225726 CACTINQ8WUQ7 758 aaKnown RBP16.6■□□□□ 0.25
CCDC47-201ENST00000225726 ZFP91Q96JP5 570 aaPredicted RBP16.6■□□□□ 0.25
CCDC47-201ENST00000225726 RMDN3Q96TC7 470 aa16.6■□□□□ 0.25
CCDC47-201ENST00000225726 ACAD9Q9H845 621 aa16.6■□□□□ 0.25
CCDC47-201ENST00000225726 COBLO75128 1261 aa16.59■□□□□ 0.25
CCDC47-201ENST00000225726 IDEP14735 1019 aa16.59■□□□□ 0.25
CCDC47-201ENST00000225726 CYP11B2P19099 503 aa16.59■□□□□ 0.25
CCDC47-201ENST00000225726 MRPS9P82933 396 aaKnown RBP16.59■□□□□ 0.25
CCDC47-201ENST00000225726 ARHGEF16Q5VV41 709 aa16.59■□□□□ 0.25
CCDC47-201ENST00000225726 B3GNT9Q6UX72 402 aa16.59■□□□□ 0.25
CCDC47-201ENST00000225726 APTXQ7Z2E3 356 aaKnown RBP16.59■□□□□ 0.25
CCDC47-201ENST00000225726 ARMC9Q7Z3E5 817 aa16.59■□□□□ 0.25
CCDC47-201ENST00000225726 LRRC8AQ8IWT6 810 aa16.59■□□□□ 0.25
CCDC47-201ENST00000225726 SYT2Q8N9I0 419 aaPredicted RBP16.59■□□□□ 0.25
CCDC47-201ENST00000225726 NOC3LQ8WTT2 800 aaKnown RBP16.59■□□□□ 0.25
CCDC47-201ENST00000225726 P2RX5Q93086 422 aa16.59■□□□□ 0.25
CCDC47-201ENST00000225726 OTUD5Q96G74 571 aa16.59■□□□□ 0.25
CCDC47-201ENST00000225726 CLMNQ96JQ2 1002 aa16.59■□□□□ 0.25
CCDC47-201ENST00000225726 HSD17B14Q9BPX1 270 aa16.59■□□□□ 0.25
CCDC47-201ENST00000225726 PDCD2LQ9BRP1 358 aa16.59■□□□□ 0.25
CCDC47-201ENST00000225726 UNC45AQ9H3U1 944 aa16.59■□□□□ 0.25
CCDC47-201ENST00000225726 GADL1Q6ZQY3 521 aa16.59■□□□□ 0.25
CCDC47-201ENST00000225726 CCDC150Q8NCX0 1101 aa16.59■□□□□ 0.25
CCDC47-201ENST00000225726 KCNH7Q9NS40 1196 aa16.59■□□□□ 0.25
CCDC47-201ENST00000225726 PANK4Q9NVE7 773 aa16.59■□□□□ 0.25
CCDC47-201ENST00000225726 LIMA1Q9UHB6 759 aaKnown RBP16.59■□□□□ 0.25
CCDC47-201ENST00000225726 COASYQ13057 564 aa16.58■□□□□ 0.25
CCDC47-201ENST00000225726 PPIL2Q13356 520 aa16.58■□□□□ 0.25
CCDC47-201ENST00000225726 EPHA7Q15375 998 aa16.58■□□□□ 0.25
CCDC47-201ENST00000225726 TTI2Q6NXR4 508 aa16.58■□□□□ 0.25
CCDC47-201ENST00000225726 CCDC65Q8IXS2 484 aa16.58■□□□□ 0.25
CCDC47-201ENST00000225726 THAP9Q9H5L6 903 aa16.58■□□□□ 0.25
CCDC47-201ENST00000225726 AGO4Q9HCK5 861 aaKnown RBP16.58■□□□□ 0.25
CCDC47-201ENST00000225726 SLC39A2Q9NP94 309 aa16.58■□□□□ 0.25
CCDC47-201ENST00000225726 KCNH4Q9UQ05 1017 aa16.58■□□□□ 0.25
CCDC47-201ENST00000225726 TRIM49BA6NDI0 452 aa16.58■□□□□ 0.24
CCDC47-201ENST00000225726 IRF6O14896 467 aa16.58■□□□□ 0.24
CCDC47-201ENST00000225726 CHMP2AO43633 222 aa16.58■□□□□ 0.24
CCDC47-201ENST00000225726 CYP4A11Q02928 519 aa16.58■□□□□ 0.24
CCDC47-201ENST00000225726 NR1I3Q14994 352 aa16.58■□□□□ 0.24
CCDC47-201ENST00000225726 MOB2Q70IA6 237 aa16.58■□□□□ 0.24
CCDC47-201ENST00000225726 MB21D1Q8N884 522 aa16.58■□□□□ 0.24
CCDC47-201ENST00000225726 EYA4O95677 639 aa16.58■□□□□ 0.24
CCDC47-201ENST00000225726 PMS1P54277 932 aaKnown RBP16.58■□□□□ 0.24
CCDC47-201ENST00000225726 PSMC6P62333 389 aa16.58■□□□□ 0.24
CCDC47-201ENST00000225726 ANKRD20A12PQ8NF67 263 aa16.58■□□□□ 0.24
CCDC47-201ENST00000225726 DYDC2Q96IM9 177 aa16.58■□□□□ 0.24
CCDC47-201ENST00000225726 TRIM47Q96LD4 638 aa16.58■□□□□ 0.24
CCDC47-201ENST00000225726 PYCARDQ9ULZ3 195 aa16.58■□□□□ 0.24
CCDC47-201ENST00000225726 CCND2P30279 289 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms