RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 FAM207AQ9NSI2 230 aaPredicted RBP23.27■■□□□ 1.32
CCDC130-201ENST00000221554 ARHGAP20Q9P2F6 1191 aa23.27■■□□□ 1.32
CCDC130-201ENST00000221554 FRMD3A2A2Y4 597 aa23.26■■□□□ 1.31
CCDC130-201ENST00000221554 PJA2O43164 708 aa23.26■■□□□ 1.31
CCDC130-201ENST00000221554 AKR1B10O60218 316 aa23.26■■□□□ 1.31
CCDC130-201ENST00000221554 DACT2Q5SW24 774 aa23.26■■□□□ 1.31
CCDC130-201ENST00000221554 NCAPH2Q6IBW4 605 aa23.26■■□□□ 1.31
CCDC130-201ENST00000221554 PDXDC1Q6P996 788 aa23.26■■□□□ 1.31
CCDC130-201ENST00000221554 RRAGAQ7L523 313 aa23.26■■□□□ 1.31
CCDC130-201ENST00000221554 GPBP1Q86WP2 473 aa23.26■■□□□ 1.31
CCDC130-201ENST00000221554 FBXO11Q86XK2 927 aa23.26■■□□□ 1.31
CCDC130-201ENST00000221554 ZC3H3Q8IXZ2 948 aaKnown RBP23.26■■□□□ 1.31
CCDC130-201ENST00000221554 CCDC155Q8N6L0 562 aa23.26■■□□□ 1.31
CCDC130-201ENST00000221554 CRYGNQ8WXF5 182 aa23.26■■□□□ 1.31
CCDC130-201ENST00000221554 TANGO6Q9C0B7 1094 aa23.26■■□□□ 1.31
CCDC130-201ENST00000221554 FAM198AQ9UFP1 575 aa23.26■■□□□ 1.31
CCDC130-201ENST00000221554 COL2A1P02458 1487 aaPredicted RBP23.25■■□□□ 1.31
CCDC130-201ENST00000221554 USP17L15C9J2P7 530 aa23.25■■□□□ 1.31
CCDC130-201ENST00000221554 USP17L13C9JLJ4 530 aa23.25■■□□□ 1.31
CCDC130-201ENST00000221554 USP17L11C9JVI0 530 aa23.25■■□□□ 1.31
CCDC130-201ENST00000221554 USP17L18D6R9N7 530 aa23.25■■□□□ 1.31
CCDC130-201ENST00000221554 USP17L22D6RA61 530 aa23.25■■□□□ 1.31
CCDC130-201ENST00000221554 USP17L17D6RBQ6 530 aa23.25■■□□□ 1.31
CCDC130-201ENST00000221554 USP17L19D6RCP7 530 aa23.25■■□□□ 1.31
CCDC130-201ENST00000221554 USP17L20D6RJB6 530 aa23.25■■□□□ 1.31
CCDC130-201ENST00000221554 MEIS2O14770 477 aa23.25■■□□□ 1.31
CCDC130-201ENST00000221554 ARHGAP4P98171 946 aa23.25■■□□□ 1.31
CCDC130-201ENST00000221554 USP17L24Q0WX57 530 aa23.25■■□□□ 1.31
CCDC130-201ENST00000221554 ABCB5Q2M3G0 1257 aa23.25■■□□□ 1.31
CCDC130-201ENST00000221554 HERC4Q5GLZ8 1057 aaPredicted RBP23.25■■□□□ 1.31
CCDC130-201ENST00000221554 USP17L6PQ6QN14 398 aa23.25■■□□□ 1.31
CCDC130-201ENST00000221554 RNF10Q8N5U6 811 aaKnown RBP23.25■■□□□ 1.31
CCDC130-201ENST00000221554 BAP1Q92560 729 aa23.25■■□□□ 1.31
CCDC130-201ENST00000221554 SH2D4AQ9H788 454 aa23.25■■□□□ 1.31
CCDC130-201ENST00000221554 ABCB6Q9NP58 842 aa23.25■■□□□ 1.31
CCDC130-201ENST00000221554 ST7Q9NRC1 585 aa23.25■■□□□ 1.31
CCDC130-201ENST00000221554 PCDHA2Q9Y5H9 948 aa23.25■■□□□ 1.31
CCDC130-201ENST00000221554 SPDYE3A6NKU9 549 aa23.24■■□□□ 1.31
CCDC130-201ENST00000221554 F5H6K3 240 aa23.24■■□□□ 1.31
CCDC130-201ENST00000221554 SSBP05455 408 aaKnown RBP eCLIP23.24■■□□□ 1.31
CCDC130-201ENST00000221554 CYP11B2P19099 503 aa23.24■■□□□ 1.31
CCDC130-201ENST00000221554 CYP2C19P33261 490 aa23.24■■□□□ 1.31
CCDC130-201ENST00000221554 EIF4A3P38919 411 aaKnown RBP23.24■■□□□ 1.31
CCDC130-201ENST00000221554 RBM5P52756 815 aaKnown RBP eCLIP23.24■■□□□ 1.31
CCDC130-201ENST00000221554 KLRC3Q07444 240 aa23.24■■□□□ 1.31
CCDC130-201ENST00000221554 LRRC41Q15345 812 aa23.24■■□□□ 1.31
CCDC130-201ENST00000221554 BTNL9Q6UXG8 535 aa23.24■■□□□ 1.31
CCDC130-201ENST00000221554 ZFPM1Q8IX07 1006 aa23.24■■□□□ 1.31
CCDC130-201ENST00000221554 VIPAS39Q9H9C1 493 aa23.24■■□□□ 1.31
CCDC130-201ENST00000221554 DBNDD1Q9H9R9 158 aa23.24■■□□□ 1.31
CCDC130-201ENST00000221554 EMILIN3Q9NT22 766 aa23.24■■□□□ 1.31
CCDC130-201ENST00000221554 DNM3Q9UQ16 869 aa23.24■■□□□ 1.31
CCDC130-201ENST00000221554 RCCD1A6NED2 376 aa23.24■■□□□ 1.31
CCDC130-201ENST00000221554 DDTLA6NHG4 134 aaPredicted RBP23.24■■□□□ 1.31
CCDC130-201ENST00000221554 ENC1O14682 589 aa23.24■■□□□ 1.31
CCDC130-201ENST00000221554 KRT18P05783 430 aaKnown RBP23.24■■□□□ 1.31
CCDC130-201ENST00000221554 MMP10P09238 476 aa23.24■■□□□ 1.31
CCDC130-201ENST00000221554 RPA1P27694 616 aa23.24■■□□□ 1.31
CCDC130-201ENST00000221554 CIITAP33076 1130 aa23.24■■□□□ 1.31
CCDC130-201ENST00000221554 SREBF1P36956 1147 aa23.24■■□□□ 1.31
CCDC130-201ENST00000221554 VSNL1P62760 191 aa23.24■■□□□ 1.31
CCDC130-201ENST00000221554 SLC9C1Q4G0N8 1177 aa23.24■■□□□ 1.31
CCDC130-201ENST00000221554 KIAA0825Q8IV33 1275 aa23.24■■□□□ 1.31
CCDC130-201ENST00000221554 ZNF622Q969S3 477 aaKnown RBP eCLIP23.24■■□□□ 1.311e-7■□□□□ 8.9
CCDC130-201ENST00000221554 TSKSQ9UJT2 592 aa23.24■■□□□ 1.31
CCDC130-201ENST00000221554 ATRNL1Q5VV63 1379 aa23.23■■□□□ 1.31
CCDC130-201ENST00000221554 LRRC53A6NM62 1247 aa23.23■■□□□ 1.31
CCDC130-201ENST00000221554 E9PMD0 336 aa23.23■■□□□ 1.31
CCDC130-201ENST00000221554 H0YIN7 160 aa23.23■■□□□ 1.31
CCDC130-201ENST00000221554 RBAK-RBAKDNI3L0D1 243 aa23.23■■□□□ 1.31
CCDC130-201ENST00000221554 CETN3O15182 167 aa23.23■■□□□ 1.31
CCDC130-201ENST00000221554 TCP1P17987 556 aaKnown RBP23.23■■□□□ 1.31
CCDC130-201ENST00000221554 CYP27A1Q02318 531 aa23.23■■□□□ 1.31
CCDC130-201ENST00000221554 TCP10Q12799 353 aa23.23■■□□□ 1.31
CCDC130-201ENST00000221554 SYDE2Q5VT97 1194 aa23.23■■□□□ 1.31
CCDC130-201ENST00000221554 ZNF572Q7Z3I7 529 aaPredicted RBP23.23■■□□□ 1.31
CCDC130-201ENST00000221554 NOA1Q8NC60 698 aaKnown RBP23.23■■□□□ 1.31
CCDC130-201ENST00000221554 ETNPPLQ8TBG4 499 aa23.23■■□□□ 1.31
CCDC130-201ENST00000221554 CAGE1Q8TC20 777 aa23.23■■□□□ 1.31
CCDC130-201ENST00000221554 JADE2Q9NQC1 790 aa23.23■■□□□ 1.31
CCDC130-201ENST00000221554 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.23■■□□□ 1.31
CCDC130-201ENST00000221554 RAD21O60216 631 aa23.22■■□□□ 1.31
CCDC130-201ENST00000221554 ECE2O60344 883 aa23.22■■□□□ 1.31
CCDC130-201ENST00000221554 SERPING1P05155 500 aa23.22■■□□□ 1.31
CCDC130-201ENST00000221554 MAGEA1P43355 309 aa23.22■■□□□ 1.31
CCDC130-201ENST00000221554 SLC12A3P55017 1021 aa23.22■■□□□ 1.31
CCDC130-201ENST00000221554 RBM26Q5T8P6 1007 aaKnown RBP23.22■■□□□ 1.31
CCDC130-201ENST00000221554 TRIM59Q8IWR1 403 aa23.22■■□□□ 1.31
CCDC130-201ENST00000221554 MMS19Q96T76 1030 aa23.22■■□□□ 1.31
CCDC130-201ENST00000221554 PSD3Q9NYI0 1048 aa23.22■■□□□ 1.31
CCDC130-201ENST00000221554 SNX12Q9UMY4 172 aa23.22■■□□□ 1.31
CCDC130-201ENST00000221554 ARFGEF1Q9Y6D6 1849 aa23.22■■□□□ 1.31
CCDC130-201ENST00000221554 MACROD2A1Z1Q3 448 aa23.22■■□□□ 1.31
CCDC130-201ENST00000221554 ZNF263O14978 683 aa23.22■■□□□ 1.31
CCDC130-201ENST00000221554 POLR3GO15318 223 aaPredicted RBP23.22■■□□□ 1.31
CCDC130-201ENST00000221554 CYP3A4P08684 503 aa23.22■■□□□ 1.31
CCDC130-201ENST00000221554 SFMBT2Q5VUG0 894 aa23.22■■□□□ 1.31
CCDC130-201ENST00000221554 MSL1Q68DK7 614 aa23.22■■□□□ 1.31
CCDC130-201ENST00000221554 CC2D2BQ6DHV5 1058 aa23.22■■□□□ 1.31
CCDC130-201ENST00000221554 SIAH1Q8IUQ4 282 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms