RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 PSMD10O75832 226 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 CYP11B2P19099 503 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 SLC12A3P55017 1021 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 FAM26FQ5R3K3 315 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 MYOCDQ8IZQ8 938 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 SYT2Q8N9I0 419 aaPredicted RBP19.37■□□□□ 0.69
VRK1-201ENST00000216639 TC2NQ8N9U0 490 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 HPS3Q969F9 1004 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 C16orf45Q96MC5 204 aaPredicted RBP19.37■□□□□ 0.69
VRK1-201ENST00000216639 PANX2Q96RD6 677 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 MXRA8Q9BRK3 442 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 TMOD4Q9NZQ9 345 aa19.37■□□□□ 0.69
VRK1-201ENST00000216639 VWA5AO00534 786 aa19.36■□□□□ 0.69
VRK1-201ENST00000216639 MUTP22033 750 aa19.36■□□□□ 0.69
VRK1-201ENST00000216639 UBXN1Q04323 297 aa19.36■□□□□ 0.69
VRK1-201ENST00000216639 PTPN14Q15678 1187 aa19.36■□□□□ 0.69
VRK1-201ENST00000216639 NIPA1Q7RTP0 329 aa19.36■□□□□ 0.69
VRK1-201ENST00000216639 CNGA4Q8IV77 575 aa19.36■□□□□ 0.69
VRK1-201ENST00000216639 CCDC51Q96ER9 411 aa19.36■□□□□ 0.69
VRK1-201ENST00000216639 TEKT3Q9BXF9 490 aa19.36■□□□□ 0.69
VRK1-201ENST00000216639 RNF181Q9P0P0 153 aa19.36■□□□□ 0.69
VRK1-201ENST00000216639 SBF1O95248 1867 aa19.36■□□□□ 0.69
VRK1-201ENST00000216639 LGALS16A8MUM7 142 aa19.35■□□□□ 0.69
VRK1-201ENST00000216639 KIF2AO00139 706 aaPredicted RBP19.35■□□□□ 0.69
VRK1-201ENST00000216639 DDNO94850 711 aaPredicted RBP19.35■□□□□ 0.69
VRK1-201ENST00000216639 BCRP11274 1271 aa19.35■□□□□ 0.69
VRK1-201ENST00000216639 TNNT1P13805 278 aa19.35■□□□□ 0.69
VRK1-201ENST00000216639 OAZ1P54368 228 aa19.35■□□□□ 0.69
VRK1-201ENST00000216639 ADKP55263 362 aaKnown RBP19.35■□□□□ 0.69
VRK1-201ENST00000216639 DCPSQ96C86 337 aaKnown RBP19.35■□□□□ 0.69
VRK1-201ENST00000216639 TRERF1Q96PN7 1200 aa19.35■□□□□ 0.69
VRK1-201ENST00000216639 RIT2Q99578 217 aa19.35■□□□□ 0.69
VRK1-201ENST00000216639 NAA15Q9BXJ9 866 aaKnown RBP19.35■□□□□ 0.69
VRK1-201ENST00000216639 SEMA6BQ9H3T3 888 aa19.35■□□□□ 0.69
VRK1-201ENST00000216639 HOMER2Q9NSB8 354 aa19.35■□□□□ 0.69
VRK1-201ENST00000216639 EYA4O95677 639 aa19.34■□□□□ 0.69
VRK1-201ENST00000216639 DNM2P50570 870 aa19.34■□□□□ 0.69
VRK1-201ENST00000216639 HMGCS2P54868 508 aa19.34■□□□□ 0.69
VRK1-201ENST00000216639 CYP4A11Q02928 519 aa19.34■□□□□ 0.69
VRK1-201ENST00000216639 RBL2Q08999 1139 aa19.34■□□□□ 0.69
VRK1-201ENST00000216639 PABPC4Q13310 644 aaKnown RBP eCLIP19.34■□□□□ 0.694e-6■■□□□ 13.4
VRK1-201ENST00000216639 HERC4Q5GLZ8 1057 aaPredicted RBP19.34■□□□□ 0.69
VRK1-201ENST00000216639 PCNX4Q63HM2 1172 aa19.34■□□□□ 0.69
VRK1-201ENST00000216639 E4F1Q66K89 784 aaPredicted RBP19.34■□□□□ 0.69
VRK1-201ENST00000216639 CNOT6LQ96LI5 555 aaKnown RBP19.34■□□□□ 0.69
VRK1-201ENST00000216639 TUBGCP2Q9BSJ2 902 aa19.34■□□□□ 0.69
VRK1-201ENST00000216639 TRMT1Q9NXH9 659 aaKnown RBP19.34■□□□□ 0.69
VRK1-201ENST00000216639 A0A1W2PQC6 194 aa19.34■□□□□ 0.69
VRK1-201ENST00000216639 IPO5O00410 1097 aaKnown RBP19.34■□□□□ 0.69
VRK1-201ENST00000216639 EML1O00423 815 aa19.34■□□□□ 0.69
VRK1-201ENST00000216639 PES1O00541 588 aaKnown RBP19.34■□□□□ 0.69
VRK1-201ENST00000216639 PRKCSHP14314 528 aaPredicted RBP19.34■□□□□ 0.69
VRK1-201ENST00000216639 MTIF2P46199 727 aaKnown RBP19.34■□□□□ 0.69
VRK1-201ENST00000216639 GOLGA8FQ08AF8 430 aa19.34■□□□□ 0.69
VRK1-201ENST00000216639 GOLGA8DPQ0D2H9 430 aa19.34■□□□□ 0.69
VRK1-201ENST00000216639 COG2Q14746 738 aa19.34■□□□□ 0.69
VRK1-201ENST00000216639 MUM1L1Q5H9M0 696 aa19.34■□□□□ 0.69
VRK1-201ENST00000216639 RNF207Q6ZRF8 634 aa19.34■□□□□ 0.69
VRK1-201ENST00000216639 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.34■□□□□ 0.69
VRK1-201ENST00000216639 SYTL5Q8TDW5 730 aaPredicted RBP19.34■□□□□ 0.69
VRK1-201ENST00000216639 ATG4CQ96DT6 458 aa19.34■□□□□ 0.69
VRK1-201ENST00000216639 HSD17B14Q9BPX1 270 aa19.34■□□□□ 0.69
VRK1-201ENST00000216639 RBBP6Q7Z6E9 1792 aaKnown RBP19.33■□□□□ 0.69
VRK1-201ENST00000216639 FRMD3A2A2Y4 597 aa19.33■□□□□ 0.68
VRK1-201ENST00000216639 USP27XA6NNY8 438 aa19.33■□□□□ 0.68
VRK1-201ENST00000216639 ZSCAN12O43309 604 aa19.33■□□□□ 0.68
VRK1-201ENST00000216639 CHMP2AO43633 222 aa19.33■□□□□ 0.68
VRK1-201ENST00000216639 TUBB4AP04350 444 aa19.33■□□□□ 0.68
VRK1-201ENST00000216639 ARP10275 920 aa19.33■□□□□ 0.68
VRK1-201ENST00000216639 DSG3P32926 999 aa19.33■□□□□ 0.68
VRK1-201ENST00000216639 TMEM139Q8IV31 216 aa19.33■□□□□ 0.68
VRK1-201ENST00000216639 SULF1Q8IWU6 871 aa19.33■□□□□ 0.68
VRK1-201ENST00000216639 MB21D1Q8N884 522 aa19.33■□□□□ 0.68
VRK1-201ENST00000216639 RBM46Q8TBY0 533 aaKnown RBP19.33■□□□□ 0.68
VRK1-201ENST00000216639 NEK9Q8TD19 979 aa19.33■□□□□ 0.68
VRK1-201ENST00000216639 COL20A1Q9P218 1284 aa19.33■□□□□ 0.68
VRK1-201ENST00000216639 SSC5DA1L4H1 1573 aa19.33■□□□□ 0.68
VRK1-201ENST00000216639 MFAP3LO75121 409 aa19.32■□□□□ 0.68
VRK1-201ENST00000216639 PSMC6P62333 389 aa19.32■□□□□ 0.68
VRK1-201ENST00000216639 RPS6P62753 249 aaKnown RBP19.32■□□□□ 0.68
VRK1-201ENST00000216639 EPHA7Q15375 998 aa19.32■□□□□ 0.68
VRK1-201ENST00000216639 ARSHQ5FYA8 562 aa19.32■□□□□ 0.68
VRK1-201ENST00000216639 NYAP1Q6ZVC0 841 aa19.32■□□□□ 0.68
VRK1-201ENST00000216639 TPH2Q8IWU9 490 aa19.32■□□□□ 0.68
VRK1-201ENST00000216639 CPLX3Q8WVH0 158 aa19.32■□□□□ 0.68
VRK1-201ENST00000216639 ZHX3Q9H4I2 956 aa19.32■□□□□ 0.68
VRK1-201ENST00000216639 FZD1Q9UP38 647 aa19.32■□□□□ 0.68
VRK1-201ENST00000216639 PAXBP1Q9Y5B6 917 aa19.32■□□□□ 0.68
VRK1-201ENST00000216639 FRMPD4Q14CM0 1322 aa19.32■□□□□ 0.68
VRK1-201ENST00000216639 USP2O75604 605 aaPredicted RBP19.31■□□□□ 0.68
VRK1-201ENST00000216639 ITGB5P18084 799 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 CASP14P31944 242 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 GIT2Q14161 759 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 LRRC41Q15345 812 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 CEP135Q66GS9 1140 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 DYDC2Q96IM9 177 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 PPP1R13BQ96KQ4 1090 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 SYT17Q9BSW7 474 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 NOC4LQ9BVI4 516 aaKnown RBP19.31■□□□□ 0.68
VRK1-201ENST00000216639 BHMT2Q9H2M3 363 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms