RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 VIPAS39Q9H9C1 493 aa17.51■□□□□ 0.39
SNAPC1-201ENST00000216294 RGS17Q9UGC6 210 aaPredicted RBP17.51■□□□□ 0.39
SNAPC1-201ENST00000216294 NFU1Q9UMS0 254 aa17.51■□□□□ 0.39
SNAPC1-201ENST00000216294 TARSL2A2RTX5 802 aaKnown RBP17.5■□□□□ 0.39
SNAPC1-201ENST00000216294 USO1O60763 962 aaKnown RBP17.5■□□□□ 0.39
SNAPC1-201ENST00000216294 TUBB4BP68371 445 aa17.5■□□□□ 0.39
SNAPC1-201ENST00000216294 KLHDC7AQ5VTJ3 777 aa17.5■□□□□ 0.39
SNAPC1-201ENST00000216294 POTEAQ6S8J7 498 aa17.5■□□□□ 0.39
SNAPC1-201ENST00000216294 FAM114A1Q8IWE2 563 aa17.5■□□□□ 0.39
SNAPC1-201ENST00000216294 TRIM58Q8NG06 486 aa17.5■□□□□ 0.39
SNAPC1-201ENST00000216294 FAM76AQ8TAV0 307 aa17.5■□□□□ 0.39
SNAPC1-201ENST00000216294 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.5■□□□□ 0.39
SNAPC1-201ENST00000216294 FAM184BQ9ULE4 1060 aa17.5■□□□□ 0.39
SNAPC1-201ENST00000216294 E9PMD0 336 aa17.5■□□□□ 0.39
SNAPC1-201ENST00000216294 TRAF5O00463 557 aa17.5■□□□□ 0.39
SNAPC1-201ENST00000216294 TAL1P17542 331 aaPredicted RBP17.5■□□□□ 0.39
SNAPC1-201ENST00000216294 IRAK1P51617 712 aa17.5■□□□□ 0.39
SNAPC1-201ENST00000216294 POLR2FP61218 127 aaKnown RBP17.5■□□□□ 0.39
SNAPC1-201ENST00000216294 HGSNATQ68CP4 663 aa17.5■□□□□ 0.39
SNAPC1-201ENST00000216294 LRRC55Q6ZSA7 311 aa17.5■□□□□ 0.39
SNAPC1-201ENST00000216294 NOC3LQ8WTT2 800 aaKnown RBP17.5■□□□□ 0.39
SNAPC1-201ENST00000216294 SHROOM1Q2M3G4 852 aaPredicted RBP17.49■□□□□ 0.39
SNAPC1-201ENST00000216294 MTMR9Q96QG7 549 aa17.49■□□□□ 0.39
SNAPC1-201ENST00000216294 ZNF287Q9HBT7 754 aa17.49■□□□□ 0.39
SNAPC1-201ENST00000216294 ANO9A1A5B4 782 aa17.49■□□□□ 0.39
SNAPC1-201ENST00000216294 ACTN1P12814 892 aa17.49■□□□□ 0.39
SNAPC1-201ENST00000216294 PDCLQ13371 301 aa17.49■□□□□ 0.39
SNAPC1-201ENST00000216294 MAN2A1Q16706 1144 aa17.49■□□□□ 0.39
SNAPC1-201ENST00000216294 MSL3Q8N5Y2 521 aaKnown RBP17.49■□□□□ 0.39
SNAPC1-201ENST00000216294 RETREG2Q8NC44 543 aa17.49■□□□□ 0.39
SNAPC1-201ENST00000216294 AK8Q96MA6 479 aa17.49■□□□□ 0.39
SNAPC1-201ENST00000216294 H0YIN7 160 aa17.48■□□□□ 0.39
SNAPC1-201ENST00000216294 PPP1R11O60927 126 aaPredicted RBP17.48■□□□□ 0.39
SNAPC1-201ENST00000216294 PALMO75781 387 aa17.48■□□□□ 0.39
SNAPC1-201ENST00000216294 NOL4O94818 638 aa17.48■□□□□ 0.39
SNAPC1-201ENST00000216294 GNGT1P63211 74 aa17.48■□□□□ 0.39
SNAPC1-201ENST00000216294 LSM14BQ9BX40 385 aaKnown RBP17.48■□□□□ 0.39
SNAPC1-201ENST00000216294 ADAMTSL1Q8N6G6 1762 aa17.48■□□□□ 0.39
SNAPC1-201ENST00000216294 MYH4Q9Y623 1939 aa17.48■□□□□ 0.39
SNAPC1-201ENST00000216294 LAD1O00515 517 aa17.48■□□□□ 0.39
SNAPC1-201ENST00000216294 MYL1P05976 194 aa17.48■□□□□ 0.39
SNAPC1-201ENST00000216294 KLRC1P26715 233 aa17.48■□□□□ 0.39
SNAPC1-201ENST00000216294 GNA11P29992 359 aa17.48■□□□□ 0.39
SNAPC1-201ENST00000216294 STAT3P40763 770 aa17.48■□□□□ 0.39
SNAPC1-201ENST00000216294 AMPD3Q01432 767 aa17.48■□□□□ 0.39
SNAPC1-201ENST00000216294 GUCY2DQ02846 1103 aa17.48■□□□□ 0.39
SNAPC1-201ENST00000216294 SLC15A2Q16348 729 aa17.48■□□□□ 0.39
SNAPC1-201ENST00000216294 UNC13DQ70J99 1090 aa17.48■□□□□ 0.39
SNAPC1-201ENST00000216294 NEDD1Q8NHV4 660 aa17.48■□□□□ 0.39
SNAPC1-201ENST00000216294 TBC1D5Q92609 795 aa17.48■□□□□ 0.39
SNAPC1-201ENST00000216294 SPZ1Q9BXG8 430 aa17.48■□□□□ 0.39
SNAPC1-201ENST00000216294 USP40Q9NVE5 1235 aa17.48■□□□□ 0.39
SNAPC1-201ENST00000216294 PCDHAC2Q9Y5I4 1007 aa17.48■□□□□ 0.39
SNAPC1-201ENST00000216294 MYH7BA7E2Y1 1941 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 A0A1W2PQJ5 194 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 PPFIA4O75335 1185 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 RPS6KA5O75582 802 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 LIG3P49916 1009 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 EHHADHQ08426 723 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 CCDC40Q4G0X9 1142 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 C8orf74Q6P047 294 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 PDXDC1Q6P996 788 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 FAM133AQ8N9E0 248 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 RAD54LQ92698 747 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 ZIM3Q96PE6 472 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 EPB41L5Q9HCM4 733 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 ADAMTS1Q9UHI8 967 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 SUGT1Q9Y2Z0 365 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 TUBBP07437 444 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 PDHBP11177 359 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 AKR1B1P15121 316 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 NT5C2P49902 561 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 SNAP25P60880 206 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 RAPGEF1Q13905 1077 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 SLC30A10Q6XR72 485 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 KCTD1Q719H9 257 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 MMGT1Q8N4V1 131 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 BCAS4Q8TDM0 211 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 KRT12Q99456 494 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 PDGFDQ9GZP0 370 aaPredicted RBP17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 IKZF4Q9H2S9 585 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 STIM2Q9P246 746 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 HYOU1Q9Y4L1 999 aa17.47■□□□□ 0.39
SNAPC1-201ENST00000216294 A0A087X0T9 212 aa17.46■□□□□ 0.39
SNAPC1-201ENST00000216294 ZEB2O60315 1214 aa17.46■□□□□ 0.39
SNAPC1-201ENST00000216294 MARCH6O60337 910 aa17.46■□□□□ 0.39
SNAPC1-201ENST00000216294 FAM228BP0C875 321 aa17.46■□□□□ 0.39
SNAPC1-201ENST00000216294 ZNF662Q6ZS27 426 aa17.46■□□□□ 0.39
SNAPC1-201ENST00000216294 KLHL7Q8IXQ5 586 aa17.46■□□□□ 0.39
SNAPC1-201ENST00000216294 ASTE1Q2TB18 679 aaPredicted RBP17.46■□□□□ 0.39
SNAPC1-201ENST00000216294 CDC42EP5Q6NZY7 148 aa17.46■□□□□ 0.39
SNAPC1-201ENST00000216294 KIAA0825Q8IV33 1275 aa17.46■□□□□ 0.39
SNAPC1-201ENST00000216294 HAS1Q92839 578 aa17.46■□□□□ 0.39
SNAPC1-201ENST00000216294 RPGRIP1Q96KN7 1286 aa17.46■□□□□ 0.39
SNAPC1-201ENST00000216294 CCDC43Q96MW1 224 aaKnown RBP17.46■□□□□ 0.39
SNAPC1-201ENST00000216294 CUEDC2Q9H467 287 aa17.46■□□□□ 0.39
SNAPC1-201ENST00000216294 USP17L15C9J2P7 530 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 USP17L13C9JLJ4 530 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 USP17L11C9JVI0 530 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 USP17L18D6R9N7 530 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms