RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 SNX25Q9H3E2 840 aa12.47□□□□□ -0.41
PKP2-201ENST00000070846 TMEM206Q9H813 350 aa12.47□□□□□ -0.41
PKP2-201ENST00000070846 GABBR1Q9UBS5 961 aa12.47□□□□□ -0.41
PKP2-201ENST00000070846 ASIC3Q9UHC3 531 aa12.47□□□□□ -0.41
PKP2-201ENST00000070846 FRMPD1Q5SYB0 1578 aa12.47□□□□□ -0.41
PKP2-201ENST00000070846 PLSCR1O15162 318 aa12.47□□□□□ -0.41
PKP2-201ENST00000070846 ARHGAP6O43182 974 aa12.47□□□□□ -0.41
PKP2-201ENST00000070846 LRRN2O75325 713 aa12.47□□□□□ -0.41
PKP2-201ENST00000070846 PDE6CP51160 858 aa12.47□□□□□ -0.41
PKP2-201ENST00000070846 JAK3P52333 1124 aa12.47□□□□□ -0.41
PKP2-201ENST00000070846 NFIAQ12857 509 aa12.47□□□□□ -0.41
PKP2-201ENST00000070846 TOB2Q14106 344 aaPredicted RBP12.47□□□□□ -0.41
PKP2-201ENST00000070846 GIMAP8Q8ND71 665 aaPredicted RBP12.47□□□□□ -0.41
PKP2-201ENST00000070846 CACTINQ8WUQ7 758 aaKnown RBP12.47□□□□□ -0.41
PKP2-201ENST00000070846 MRRFQ96E11 262 aaKnown RBP12.47□□□□□ -0.41
PKP2-201ENST00000070846 ABCC12Q96J65 1359 aa12.47□□□□□ -0.41
PKP2-201ENST00000070846 FAM167AQ96KS9 214 aa12.47□□□□□ -0.41
PKP2-201ENST00000070846 CNOT6LQ96LI5 555 aaKnown RBP12.47□□□□□ -0.41
PKP2-201ENST00000070846 VCPKMTQ9H867 229 aa12.47□□□□□ -0.41
PKP2-201ENST00000070846 ASB14A6NK59 587 aa12.46□□□□□ -0.41
PKP2-201ENST00000070846 WDR46O15213 610 aaKnown RBP12.46□□□□□ -0.41
PKP2-201ENST00000070846 SLU7O95391 586 aaKnown RBP12.46□□□□□ -0.41
PKP2-201ENST00000070846 MCPH1Q8NEM0 835 aa12.46□□□□□ -0.41
PKP2-201ENST00000070846 CCDC26Q8TAB7 109 aa12.46□□□□□ -0.41
PKP2-201ENST00000070846 RNF8O76064 485 aa12.46□□□□□ -0.41
PKP2-201ENST00000070846 SLC10A5Q5PT55 438 aa12.46□□□□□ -0.41
PKP2-201ENST00000070846 ANKRD13CQ8N6S4 541 aa12.46□□□□□ -0.41
PKP2-201ENST00000070846 OXER1Q8TDS5 423 aa12.46□□□□□ -0.41
PKP2-201ENST00000070846 ZMYND15Q9H091 742 aa12.46□□□□□ -0.41
PKP2-201ENST00000070846 PCDHB4Q9Y5E5 795 aa12.46□□□□□ -0.41
PKP2-201ENST00000070846 SRPRBQ9Y5M8 271 aaKnown RBP12.46□□□□□ -0.41
PKP2-201ENST00000070846 NSFP46459 744 aaKnown RBP12.46□□□□□ -0.42
PKP2-201ENST00000070846 MTA3Q9BTC8 594 aa12.46□□□□□ -0.42
PKP2-201ENST00000070846 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.46□□□□□ -0.42
PKP2-201ENST00000070846 COPB2P35606 906 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 RPS6KA1Q15418 735 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 ARL6IP4Q66PJ3 421 aaKnown RBP12.45□□□□□ -0.42
PKP2-201ENST00000070846 CASC4Q6P4E1 433 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 FAM20AQ96MK3 541 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 ADARB2Q9NS39 739 aaKnown RBP12.45□□□□□ -0.42
PKP2-201ENST00000070846 LAMC1P11047 1609 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 GPR75-ASB3A0A0A6YYF3 556 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 ERICH4A6NGS2 130 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 STAMBPO95630 424 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 CD58P19256 250 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 MXI1P50539 228 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 MYL7Q01449 175 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 ZNF543Q08ER8 600 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 DSTYKQ6XUX3 929 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 P2RX5Q93086 422 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 MSTO1Q9BUK6 570 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 RPF1Q9H9Y2 349 aaKnown RBP12.45□□□□□ -0.42
PKP2-201ENST00000070846 SH3GLB2Q9NR46 395 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 TUBB4AP04350 444 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 NBPF9Q3BBW0 867 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 PTF1AQ7RTS3 328 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 DAAM2Q86T65 1068 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 SH2D3AQ9BRG2 576 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 FHDC1Q9C0D6 1143 aaPredicted RBP12.45□□□□□ -0.42
PKP2-201ENST00000070846 MIS12Q9H081 205 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 BARHL2Q9NY43 387 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 CGNQ9P2M7 1197 aaKnown RBP12.45□□□□□ -0.42
PKP2-201ENST00000070846 CCDC66A2RUB6 948 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 DENND3A2RUS2 1198 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 CLDN3O15551 220 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 TDP2O95551 362 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 H2AFZP0C0S5 128 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 CETPP11597 493 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 QARSP47897 775 aaKnown RBP12.45□□□□□ -0.42
PKP2-201ENST00000070846 RFX5P48382 616 aaPredicted RBP12.45□□□□□ -0.42
PKP2-201ENST00000070846 PADI6Q6TGC4 694 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 H2AFVQ71UI9 128 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 TRIM50Q86XT4 487 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 TCP11Q8WWU5 503 aa12.45□□□□□ -0.42
PKP2-201ENST00000070846 CEP55Q53EZ4 464 aa12.44□□□□□ -0.42
PKP2-201ENST00000070846 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.44□□□□□ -0.42
PKP2-201ENST00000070846 RHPN2Q8IUC4 686 aa12.44□□□□□ -0.42
PKP2-201ENST00000070846 NAPGQ99747 312 aaPredicted RBP12.44□□□□□ -0.42
PKP2-201ENST00000070846 RIC8AQ9NPQ8 531 aa12.44□□□□□ -0.42
PKP2-201ENST00000070846 ZNF302Q9NR11 478 aa12.44□□□□□ -0.42
PKP2-201ENST00000070846 NYAP2Q9P242 653 aa12.44□□□□□ -0.42
PKP2-201ENST00000070846 PRR12Q9ULL5 1215 aa12.44□□□□□ -0.42
PKP2-201ENST00000070846 SPATA31D1Q6ZQQ2 1576 aa12.44□□□□□ -0.42
PKP2-201ENST00000070846 PRELPP51888 382 aa12.44□□□□□ -0.42
PKP2-201ENST00000070846 BPIFB4P59827 614 aa12.44□□□□□ -0.42
PKP2-201ENST00000070846 SND1Q7KZF4 910 aaKnown RBP eCLIP12.44□□□□□ -0.42
PKP2-201ENST00000070846 CCDC105Q8IYK2 499 aa12.44□□□□□ -0.42
PKP2-201ENST00000070846 FBXO28Q9NVF7 368 aa12.44□□□□□ -0.42
PKP2-201ENST00000070846 POTEB3A0JP26 581 aa12.44□□□□□ -0.42
PKP2-201ENST00000070846 POTECB2RU33 542 aa12.44□□□□□ -0.42
PKP2-201ENST00000070846 GGPS1O95749 300 aa12.44□□□□□ -0.42
PKP2-201ENST00000070846 RASA1P20936 1047 aa12.44□□□□□ -0.42
PKP2-201ENST00000070846 DPCR1Q3MIW9 517 aa12.44□□□□□ -0.42
PKP2-201ENST00000070846 POTEBQ6S5H4 581 aa12.44□□□□□ -0.42
PKP2-201ENST00000070846 KLHL7Q8IXQ5 586 aa12.44□□□□□ -0.42
PKP2-201ENST00000070846 ATG4CQ96DT6 458 aa12.44□□□□□ -0.42
PKP2-201ENST00000070846 LRRC4Q9HBW1 653 aa12.44□□□□□ -0.42
PKP2-201ENST00000070846 TOPORSQ9NS56 1045 aaPredicted RBP12.44□□□□□ -0.42
PKP2-201ENST00000070846 ZNF233A6NK53 670 aa12.43□□□□□ -0.42
PKP2-201ENST00000070846 E9PMD0 336 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms