RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 ZNF658Q5TYW1 1059 aaPredicted RBP12.09□□□□□ -0.47
RGPD5-201ENST00000016946 HDXQ7Z353 690 aa12.09□□□□□ -0.47
RGPD5-201ENST00000016946 DEFB132Q7Z7B7 95 aa12.09□□□□□ -0.47
RGPD5-201ENST00000016946 ATP6V0A4Q9HBG4 840 aa12.09□□□□□ -0.47
RGPD5-201ENST00000016946 ORC4O43929 436 aa12.09□□□□□ -0.47
RGPD5-201ENST00000016946 LARGE1O95461 756 aa12.09□□□□□ -0.47
RGPD5-201ENST00000016946 NME8Q8N427 588 aa12.09□□□□□ -0.47
RGPD5-201ENST00000016946 FTOQ9C0B1 505 aaKnown RBP eCLIP12.09□□□□□ -0.47
RGPD5-201ENST00000016946 USP42Q9H9J4 1324 aaKnown RBP12.09□□□□□ -0.47
RGPD5-201ENST00000016946 MYO1FO00160 1098 aa12.09□□□□□ -0.47
RGPD5-201ENST00000016946 CCNE1P24864 410 aa12.09□□□□□ -0.47
RGPD5-201ENST00000016946 PSMC4P43686 418 aa12.09□□□□□ -0.47
RGPD5-201ENST00000016946 MAN2A1Q16706 1144 aa12.09□□□□□ -0.47
RGPD5-201ENST00000016946 MB21D2Q8IYB1 491 aaPredicted RBP12.09□□□□□ -0.47
RGPD5-201ENST00000016946 MRFAP1L1Q96HT8 127 aa12.09□□□□□ -0.47
RGPD5-201ENST00000016946 MSTO1Q9BUK6 570 aa12.09□□□□□ -0.47
RGPD5-201ENST00000016946 CARD6Q9BX69 1037 aa12.09□□□□□ -0.47
RGPD5-201ENST00000016946 MMP19Q99542 508 aa12.09□□□□□ -0.47
RGPD5-201ENST00000016946 OSBPL5Q9H0X9 879 aaPredicted RBP12.09□□□□□ -0.47
RGPD5-201ENST00000016946 RPF1Q9H9Y2 349 aaKnown RBP12.09□□□□□ -0.47
RGPD5-201ENST00000016946 SAMD15Q9P1V8 674 aa12.09□□□□□ -0.47
RGPD5-201ENST00000016946 A6NJR5 290 aa12.09□□□□□ -0.47
RGPD5-201ENST00000016946 ASB14A6NK59 587 aa12.09□□□□□ -0.47
RGPD5-201ENST00000016946 PAK2Q13177 524 aa12.09□□□□□ -0.47
RGPD5-201ENST00000016946 NKX1-1Q15270 411 aaPredicted RBP12.09□□□□□ -0.47
RGPD5-201ENST00000016946 FAM20AQ96MK3 541 aa12.09□□□□□ -0.47
RGPD5-201ENST00000016946 IFT122Q9HBG6 1241 aa12.09□□□□□ -0.47
RGPD5-201ENST00000016946 ZBTB12Q9Y330 459 aaPredicted RBP12.09□□□□□ -0.47
RGPD5-201ENST00000016946 ARHGAP4P98171 946 aa12.09□□□□□ -0.47
RGPD5-201ENST00000016946 SETDB1Q15047 1291 aa12.09□□□□□ -0.47
RGPD5-201ENST00000016946 HHIPL2Q6UWX4 724 aa12.09□□□□□ -0.47
RGPD5-201ENST00000016946 THNSL1Q8IYQ7 743 aa12.09□□□□□ -0.47
RGPD5-201ENST00000016946 NRKQ7Z2Y5 1582 aa12.08□□□□□ -0.47
RGPD5-201ENST00000016946 CSF1RP07333 972 aa12.08□□□□□ -0.47
RGPD5-201ENST00000016946 ELF1P32519 619 aa12.08□□□□□ -0.47
RGPD5-201ENST00000016946 ITKQ08881 620 aa12.08□□□□□ -0.47
RGPD5-201ENST00000016946 SCARF1Q14162 830 aa12.08□□□□□ -0.47
RGPD5-201ENST00000016946 BBS5Q8N3I7 341 aa12.08□□□□□ -0.47
RGPD5-201ENST00000016946 C7orf31Q8N865 590 aa12.08□□□□□ -0.47
RGPD5-201ENST00000016946 TRIM11Q96F44 468 aa12.08□□□□□ -0.47
RGPD5-201ENST00000016946 DLC1Q96QB1 1528 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 THAP12O43422 761 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 PRELPP51888 382 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 C12orf60Q5U649 245 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 GGA3Q9NZ52 723 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 DDIT3P35638 169 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 PPP1R2P3Q6NXS1 205 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 MICAL1Q8TDZ2 1067 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 VPS37BQ9H9H4 285 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 TOPORSQ9NS56 1045 aaPredicted RBP12.08□□□□□ -0.48
RGPD5-201ENST00000016946 SAR1BQ9Y6B6 198 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 PPP2R5EQ16537 467 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 ANGEL2Q5VTE6 544 aaKnown RBP12.08□□□□□ -0.48
RGPD5-201ENST00000016946 CYB5R4Q7L1T6 521 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 SRGAP1Q7Z6B7 1085 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 ATP8B3O60423 1300 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 PHLPP2Q6ZVD8 1323 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 KCNK3O14649 394 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 SFNP31947 248 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 RSBN1LQ6PCB5 846 aaPredicted RBP12.08□□□□□ -0.48
RGPD5-201ENST00000016946 ARMCX2Q7L311 632 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 RAB17Q9H0T7 212 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 RPAP3Q9H6T3 665 aaPredicted RBP12.08□□□□□ -0.48
RGPD5-201ENST00000016946 CSPG5O95196 566 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 LMNB1P20700 586 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 SMYD4Q8IYR2 804 aaPredicted RBP12.08□□□□□ -0.48
RGPD5-201ENST00000016946 GRAMD1CQ8IYS0 662 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 EPSTI1Q96J88 318 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 RPGRIP1Q96KN7 1286 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 LRRC4Q9HBW1 653 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 GPBP1L1Q9HC44 474 aaPredicted RBP12.08□□□□□ -0.48
RGPD5-201ENST00000016946 ZNF70Q9UC06 446 aaPredicted RBP12.08□□□□□ -0.48
RGPD5-201ENST00000016946 HYOU1Q9Y4L1 999 aa12.08□□□□□ -0.48
RGPD5-201ENST00000016946 STK36Q9NRP7 1315 aa12.07□□□□□ -0.48
RGPD5-201ENST00000016946 GMPSP49915 693 aaPredicted RBP12.07□□□□□ -0.48
RGPD5-201ENST00000016946 PEX3P56589 373 aa12.07□□□□□ -0.48
RGPD5-201ENST00000016946 DSTYKQ6XUX3 929 aa12.07□□□□□ -0.48
RGPD5-201ENST00000016946 FAM76AQ8TAV0 307 aa12.07□□□□□ -0.48
RGPD5-201ENST00000016946 GRK7Q8WTQ7 553 aa12.07□□□□□ -0.48
RGPD5-201ENST00000016946 CALCOCO1Q9P1Z2 691 aa12.07□□□□□ -0.48
RGPD5-201ENST00000016946 NCOA3Q9Y6Q9 1424 aa12.07□□□□□ -0.48
RGPD5-201ENST00000016946 LDHAP00338 332 aaKnown RBP12.07□□□□□ -0.48
RGPD5-201ENST00000016946 NEK9Q8TD19 979 aa12.07□□□□□ -0.48
RGPD5-201ENST00000016946 RIMBP3CA6NJZ7 1639 aa12.07□□□□□ -0.48
RGPD5-201ENST00000016946 RIMBP3BA6NNM3 1639 aa12.07□□□□□ -0.48
RGPD5-201ENST00000016946 RIMBP3Q9UFD9 1639 aa12.07□□□□□ -0.48
RGPD5-201ENST00000016946 RPS12P25398 132 aaKnown RBP12.07□□□□□ -0.48
RGPD5-201ENST00000016946 PHKA2P46019 1235 aa12.07□□□□□ -0.48
RGPD5-201ENST00000016946 COG2Q14746 738 aa12.07□□□□□ -0.48
RGPD5-201ENST00000016946 DESI2Q9BSY9 194 aa12.07□□□□□ -0.48
RGPD5-201ENST00000016946 ZNF233A6NK53 670 aa12.07□□□□□ -0.48
RGPD5-201ENST00000016946 MTMR2Q13614 643 aa12.07□□□□□ -0.48
RGPD5-201ENST00000016946 CTAGE3PQ8IX95 158 aa12.07□□□□□ -0.48
RGPD5-201ENST00000016946 CHAMP1Q96JM3 812 aa12.07□□□□□ -0.48
RGPD5-201ENST00000016946 C19orf81C9J6K1 198 aa12.07□□□□□ -0.48
RGPD5-201ENST00000016946 TECPR2O15040 1411 aa12.07□□□□□ -0.48
RGPD5-201ENST00000016946 BUB1O43683 1085 aa12.07□□□□□ -0.48
RGPD5-201ENST00000016946 MAPK6Q16659 721 aa12.07□□□□□ -0.48
RGPD5-201ENST00000016946 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.07□□□□□ -0.48
RGPD5-201ENST00000016946 CAMSAP1Q5T5Y3 1602 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms