RNA–Protein interactions for RNA: ENST00000009180.8

CD9-201, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD9, Length 1,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-201ENST00000009180 U2AF1L4Q8WU68 220 aaKnown RBP11.42□□□□□ -0.58
CD9-201ENST00000009180 ZNF577Q9BSK1 485 aa11.42□□□□□ -0.58
CD9-201ENST00000009180 TMEM60Q9H2L4 133 aa11.42□□□□□ -0.58
CD9-201ENST00000009180 PCDHB6Q9Y5E3 794 aa11.42□□□□□ -0.58
CD9-201ENST00000009180 IPO5O00410 1097 aaKnown RBP11.41□□□□□ -0.58
CD9-201ENST00000009180 CTAGE5O15320 804 aa11.41□□□□□ -0.58
CD9-201ENST00000009180 ADAMTS4O75173 837 aa11.41□□□□□ -0.58
CD9-201ENST00000009180 BRD1O95696 1058 aa11.41□□□□□ -0.58
CD9-201ENST00000009180 F13A1P00488 732 aa11.41□□□□□ -0.58
CD9-201ENST00000009180 GH1P01241 217 aa11.41□□□□□ -0.58
CD9-201ENST00000009180 GJB1P08034 283 aa11.41□□□□□ -0.58
CD9-201ENST00000009180 C6orf222P0C671 652 aaPredicted RBP11.41□□□□□ -0.58
CD9-201ENST00000009180 GCFC2P16383 781 aaKnown RBP11.41□□□□□ -0.58
CD9-201ENST00000009180 SOX10P56693 466 aa11.41□□□□□ -0.58
CD9-201ENST00000009180 CELF3Q5SZQ8 465 aaKnown RBP11.41□□□□□ -0.58
CD9-201ENST00000009180 PPP4R3AQ6IN85 833 aa11.41□□□□□ -0.58
CD9-201ENST00000009180 KCNV1Q6PIU1 500 aa11.41□□□□□ -0.58
CD9-201ENST00000009180 MOXD1Q6UVY6 613 aa11.41□□□□□ -0.58
CD9-201ENST00000009180 DHX37Q8IY37 1157 aaKnown RBP11.41□□□□□ -0.58
CD9-201ENST00000009180 ETNPPLQ8TBG4 499 aa11.41□□□□□ -0.58
CD9-201ENST00000009180 AFG1LQ8WV93 481 aa11.41□□□□□ -0.58
CD9-201ENST00000009180 SLC5A5Q92911 643 aa11.41□□□□□ -0.58
CD9-201ENST00000009180 CHAMP1Q96JM3 812 aa11.41□□□□□ -0.58
CD9-201ENST00000009180 TMEM106CQ9BVX2 250 aa11.41□□□□□ -0.58
CD9-201ENST00000009180 UPF3AQ9H1J1 476 aaKnown RBP11.41□□□□□ -0.58
CD9-201ENST00000009180 DOCK5Q9H7D0 1870 aa11.4□□□□□ -0.58
CD9-201ENST00000009180 CCDC85CA6NKD9 419 aa11.4□□□□□ -0.58
CD9-201ENST00000009180 DHX15O43143 795 aaKnown RBP11.4□□□□□ -0.58
CD9-201ENST00000009180 NEMFO60524 1076 aa11.4□□□□□ -0.58
CD9-201ENST00000009180 MSCO60682 206 aa11.4□□□□□ -0.58
CD9-201ENST00000009180 FARP2O94887 1054 aaPredicted RBP11.4□□□□□ -0.58
CD9-201ENST00000009180 SGPL1O95470 568 aa11.4□□□□□ -0.58
CD9-201ENST00000009180 CCNE2O96020 404 aa11.4□□□□□ -0.58
CD9-201ENST00000009180 TRAPPC10P48553 1259 aa11.4□□□□□ -0.58
CD9-201ENST00000009180 GJA9P57773 515 aa11.4□□□□□ -0.58
CD9-201ENST00000009180 LRRC41Q15345 812 aa11.4□□□□□ -0.58
CD9-201ENST00000009180 CALCRLQ16602 461 aa11.4□□□□□ -0.58
CD9-201ENST00000009180 FSCN1Q16658 493 aaKnown RBP11.4□□□□□ -0.58
CD9-201ENST00000009180 METTL7BQ6UX53 244 aa11.4□□□□□ -0.58
CD9-201ENST00000009180 HAS1Q92839 578 aa11.4□□□□□ -0.58
CD9-201ENST00000009180 CDHR1Q96JP9 859 aa11.4□□□□□ -0.58
CD9-201ENST00000009180 SPATA33Q96N06 139 aa11.4□□□□□ -0.58
CD9-201ENST00000009180 NAP1L4Q99733 375 aaKnown RBP11.4□□□□□ -0.58
CD9-201ENST00000009180 CRISPLD2Q9H0B8 497 aa11.4□□□□□ -0.58
CD9-201ENST00000009180 AP5M1Q9H0R1 490 aa11.4□□□□□ -0.58
CD9-201ENST00000009180 MLXIPQ9HAP2 919 aa11.4□□□□□ -0.58
CD9-201ENST00000009180 KCNMB3Q9NPA1 279 aa11.4□□□□□ -0.58
CD9-201ENST00000009180 OGDHLQ9ULD0 1010 aa11.4□□□□□ -0.58
CD9-201ENST00000009180 CLIC4Q9Y696 253 aa11.4□□□□□ -0.58
CD9-201ENST00000009180 NKRFO15226 690 aaKnown RBP eCLIP11.39□□□□□ -0.59
CD9-201ENST00000009180 MAFGO15525 162 aa11.39□□□□□ -0.59
CD9-201ENST00000009180 CHMP2AO43633 222 aa11.39□□□□□ -0.59
CD9-201ENST00000009180 GAS7O60861 476 aa11.39□□□□□ -0.59
CD9-201ENST00000009180 TFRCP02786 760 aaKnown RBP11.39□□□□□ -0.59
CD9-201ENST00000009180 MMP3P08254 477 aa11.39□□□□□ -0.59
CD9-201ENST00000009180 TGFB3P10600 412 aa11.39□□□□□ -0.59
CD9-201ENST00000009180 EN2P19622 333 aaPredicted RBP11.39□□□□□ -0.59
CD9-201ENST00000009180 GJA8P48165 433 aa11.39□□□□□ -0.59
CD9-201ENST00000009180 MNX1P50219 401 aaPredicted RBP11.39□□□□□ -0.59
CD9-201ENST00000009180 CEBPZQ03701 1054 aaKnown RBP11.39□□□□□ -0.59
CD9-201ENST00000009180 NEDD9Q14511 834 aa11.39□□□□□ -0.59
CD9-201ENST00000009180 HSDL1Q3SXM5 330 aa11.39□□□□□ -0.59
CD9-201ENST00000009180 RILPL1Q5EBL4 403 aa11.39□□□□□ -0.59
CD9-201ENST00000009180 LRCH2Q5VUJ6 765 aa11.39□□□□□ -0.59
CD9-201ENST00000009180 DIS3LQ8TF46 1054 aaKnown RBP11.39□□□□□ -0.59
CD9-201ENST00000009180 PPP1R13LQ8WUF5 828 aa11.39□□□□□ -0.59
CD9-201ENST00000009180 IPO9Q96P70 1041 aaKnown RBP11.39□□□□□ -0.59
CD9-201ENST00000009180 SENP7Q9BQF6 1050 aa11.39□□□□□ -0.59
CD9-201ENST00000009180 SDF4Q9BRK5 362 aa11.39□□□□□ -0.59
CD9-201ENST00000009180 UNC45AQ9H3U1 944 aa11.39□□□□□ -0.59
CD9-201ENST00000009180 JPH1Q9HDC5 661 aaPredicted RBP11.39□□□□□ -0.59
CD9-201ENST00000009180 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.39□□□□□ -0.59
CD9-201ENST00000009180 SLC9A2Q9UBY0 812 aa11.39□□□□□ -0.59
CD9-201ENST00000009180 NFASCO94856 1347 aa11.38□□□□□ -0.59
CD9-201ENST00000009180 NOP56O00567 594 aaKnown RBP11.38□□□□□ -0.59
CD9-201ENST00000009180 MARCH6O60337 910 aa11.38□□□□□ -0.59
CD9-201ENST00000009180 PSMD10O75832 226 aa11.38□□□□□ -0.59
CD9-201ENST00000009180 MYL3P08590 195 aa11.38□□□□□ -0.59
CD9-201ENST00000009180 OR52Z1P0C646 297 aa11.38□□□□□ -0.59
CD9-201ENST00000009180 ZNF286BP0CG31 522 aa11.38□□□□□ -0.59
CD9-201ENST00000009180 TXKP42681 527 aa11.38□□□□□ -0.59
CD9-201ENST00000009180 ACTR2P61160 394 aa11.38□□□□□ -0.59
CD9-201ENST00000009180 PTGDRQ13258 359 aa11.38□□□□□ -0.59
CD9-201ENST00000009180 LAMC2Q13753 1193 aa11.38□□□□□ -0.59
CD9-201ENST00000009180 SF3A1Q15459 793 aaKnown RBP11.38□□□□□ -0.59
CD9-201ENST00000009180 GNASQ5JWF2 1037 aa11.38□□□□□ -0.59
CD9-201ENST00000009180 TRIM50Q86XT4 487 aa11.38□□□□□ -0.59
CD9-201ENST00000009180 C4orf32Q8N8J7 132 aa11.38□□□□□ -0.59
CD9-201ENST00000009180 KLHDC9Q8NEP7 349 aa11.38□□□□□ -0.59
CD9-201ENST00000009180 EMID1Q96A84 441 aaPredicted RBP11.38□□□□□ -0.59
CD9-201ENST00000009180 MTMR9Q96QG7 549 aa11.38□□□□□ -0.59
CD9-201ENST00000009180 USP28Q96RU2 1077 aa11.38□□□□□ -0.59
CD9-201ENST00000009180 RIT2Q99578 217 aa11.38□□□□□ -0.59
CD9-201ENST00000009180 GPR20Q99678 358 aa11.38□□□□□ -0.59
CD9-201ENST00000009180 TEKT3Q9BXF9 490 aa11.38□□□□□ -0.59
CD9-201ENST00000009180 ZSCAN16Q9H4T2 348 aaPredicted RBP11.38□□□□□ -0.59
CD9-201ENST00000009180 VAV3Q9UKW4 847 aa11.38□□□□□ -0.59
CD9-201ENST00000009180 Q9Y3F1 56 aa11.38□□□□□ -0.59
CD9-201ENST00000009180 ELP1O95163 1332 aa11.37□□□□□ -0.59
CD9-201ENST00000009180 GSTTP1A0A1W2PQM5 241 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms