RNA–Protein interactions for RNA: ENSMUST00000219577.1

Herc4-208, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Herc4, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-208ENSMUST00000219577 Casz1Q9CWL2 1761 aa13.28□□□□□ -0.28
Herc4-208ENSMUST00000219577 MycnP03966 462 aaKnown RBP13.28□□□□□ -0.28
Herc4-208ENSMUST00000219577 Dpcr1Q3TNW5 500 aa13.28□□□□□ -0.28
Herc4-208ENSMUST00000219577 Skor1Q8BX46 964 aa13.28□□□□□ -0.28
Herc4-208ENSMUST00000219577 OplahQ8K010 1288 aa13.28□□□□□ -0.28
Herc4-208ENSMUST00000219577 Rhobtb3Q9CTN4 611 aa13.28□□□□□ -0.28
Herc4-208ENSMUST00000219577 Smco2Q9DA21 347 aa13.28□□□□□ -0.28
Herc4-208ENSMUST00000219577 Slc12a7Q9WVL3 1083 aa13.28□□□□□ -0.28
Herc4-208ENSMUST00000219577 Ppp4cP97470 307 aa13.28□□□□□ -0.28
Herc4-208ENSMUST00000219577 Kctd16Q5DTY9 427 aa13.28□□□□□ -0.28
Herc4-208ENSMUST00000219577 Trpc6Q61143 930 aa13.28□□□□□ -0.28
Herc4-208ENSMUST00000219577 Spata2Q8K004 515 aa13.28□□□□□ -0.28
Herc4-208ENSMUST00000219577 Tdrd3Q91W18 743 aaKnown RBP13.28□□□□□ -0.28
Herc4-208ENSMUST00000219577 Klrc1Q9Z202 244 aa13.28□□□□□ -0.28
Herc4-208ENSMUST00000219577 Proca1B0QZF7 307 aa13.27□□□□□ -0.28
Herc4-208ENSMUST00000219577 Psmd14O35593 310 aa13.27□□□□□ -0.28
Herc4-208ENSMUST00000219577 Kifap3P70188 793 aa13.27□□□□□ -0.28
Herc4-208ENSMUST00000219577 EgfrQ01279 1210 aa13.27□□□□□ -0.28
Herc4-208ENSMUST00000219577 NntQ61941 1086 aaKnown RBP13.27□□□□□ -0.28
Herc4-208ENSMUST00000219577 Arhgef7Q9ES28 862 aa13.27□□□□□ -0.28
Herc4-208ENSMUST00000219577 Ddx25Q9QY15 484 aa13.27□□□□□ -0.28
Herc4-208ENSMUST00000219577 AoahO35298 574 aa13.27□□□□□ -0.29
Herc4-208ENSMUST00000219577 Eps15P42567 897 aa13.27□□□□□ -0.29
Herc4-208ENSMUST00000219577 Vmn1r209Q5NC97 312 aa13.27□□□□□ -0.29
Herc4-208ENSMUST00000219577 CrkQ64010 304 aa13.27□□□□□ -0.29
Herc4-208ENSMUST00000219577 Fbxo11Q7TPD1 930 aaKnown RBP13.27□□□□□ -0.29
Herc4-208ENSMUST00000219577 Pank4Q80YV4 820 aa13.27□□□□□ -0.29
Herc4-208ENSMUST00000219577 Def6Q8C2K1 630 aa13.27□□□□□ -0.29
Herc4-208ENSMUST00000219577 Lgi2Q8K4Z0 550 aa13.27□□□□□ -0.29
Herc4-208ENSMUST00000219577 Ankrd2Q9WV06 328 aa13.27□□□□□ -0.29
Herc4-208ENSMUST00000219577 Ttc38A3KMP2 465 aa13.27□□□□□ -0.29
Herc4-208ENSMUST00000219577 Nmt1O70310 496 aaKnown RBP13.27□□□□□ -0.29
Herc4-208ENSMUST00000219577 Lrrn2Q6PHP6 730 aa13.27□□□□□ -0.29
Herc4-208ENSMUST00000219577 MlxiplQ99MZ3 864 aa13.27□□□□□ -0.29
Herc4-208ENSMUST00000219577 Erp44Q9D1Q6 406 aa13.27□□□□□ -0.29
Herc4-208ENSMUST00000219577 Lrp6O88572 1613 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Gm28510A0A087WP28 240 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Ppp1r9aH3BJD6 1292 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Vps33bP59016 617 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Kcnj11Q61743 390 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 WaplQ65Z40 1200 aaKnown RBP13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Foxo6Q70KY4 559 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Tubb2aQ7TMM9 445 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Cracr2bQ80ZJ8 394 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Ms4a5Q810P8 197 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Trim47Q8C0E3 641 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Rfc4Q99J62 364 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Pstpip2Q99M15 334 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Tubb2bQ9CWF2 445 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Zfp984A2A7A2 547 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Arhgap6O54834 987 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Rps6ka1P18653 724 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Rfc1P35601 1131 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Gm5169Q5M8P2 212 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Prdm4Q80V63 803 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Plagl2Q925T4 496 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Abcf2Q99LE6 628 aaKnown RBP13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Dnajc19Q9CQV7 116 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 AfdnQ9QZQ1 1820 aaKnown RBP13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Arhgap4B1AUY3 965 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Krt18P05784 423 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Foxd1Q61345 456 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Anks6Q6GQX6 883 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Elmo3Q8BYZ7 720 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Cog5Q8C0L8 829 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Ccdc113Q8C5T8 377 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 Pnpla6Q3TRM4 1355 aa13.26□□□□□ -0.29
Herc4-208ENSMUST00000219577 AgtP11859 477 aa13.25□□□□□ -0.29
Herc4-208ENSMUST00000219577 Cd44P15379 778 aa13.25□□□□□ -0.29
Herc4-208ENSMUST00000219577 Lrig2Q52KR2 1054 aa13.25□□□□□ -0.29
Herc4-208ENSMUST00000219577 FntaQ61239 377 aa13.25□□□□□ -0.29
Herc4-208ENSMUST00000219577 GzmnQ920S1 248 aa13.25□□□□□ -0.29
Herc4-208ENSMUST00000219577 Myo1cQ9WTI7 1063 aa13.25□□□□□ -0.29
Herc4-208ENSMUST00000219577 Lama4P97927 1816 aa13.25□□□□□ -0.29
Herc4-208ENSMUST00000219577 Zc3h7bF8VPP8 982 aaKnown RBP13.25□□□□□ -0.29
Herc4-208ENSMUST00000219577 Ano9P86044 747 aa13.25□□□□□ -0.29
Herc4-208ENSMUST00000219577 Klhdc9Q3USL1 350 aa13.25□□□□□ -0.29
Herc4-208ENSMUST00000219577 Ccdc157Q5SPX1 718 aa13.25□□□□□ -0.29
Herc4-208ENSMUST00000219577 GnptabQ69ZN6 1235 aa13.25□□□□□ -0.29
Herc4-208ENSMUST00000219577 Afg3l2Q8JZQ2 802 aaKnown RBP13.25□□□□□ -0.29
Herc4-208ENSMUST00000219577 Vmn2r79E9Q067 851 aa13.25□□□□□ -0.29
Herc4-208ENSMUST00000219577 Apol10bG3X9K7 334 aa13.25□□□□□ -0.29
Herc4-208ENSMUST00000219577 CraddO88843 199 aa13.25□□□□□ -0.29
Herc4-208ENSMUST00000219577 Idh1O88844 414 aaKnown RBP13.25□□□□□ -0.29
Herc4-208ENSMUST00000219577 GanQ8CA72 597 aa13.25□□□□□ -0.29
Herc4-208ENSMUST00000219577 Tbx22Q8K402 517 aa13.25□□□□□ -0.29
Herc4-208ENSMUST00000219577 CsadQ9DBE0 493 aa13.25□□□□□ -0.29
Herc4-208ENSMUST00000219577 Xirp1O70373 1129 aa13.24□□□□□ -0.29
Herc4-208ENSMUST00000219577 Tcp1P11983 556 aaKnown RBP13.24□□□□□ -0.29
Herc4-208ENSMUST00000219577 Lig1P37913 916 aa13.24□□□□□ -0.29
Herc4-208ENSMUST00000219577 Appl2Q8K3G9 662 aa13.24□□□□□ -0.29
Herc4-208ENSMUST00000219577 Acat1Q8QZT1 424 aa13.24□□□□□ -0.29
Herc4-208ENSMUST00000219577 Fsip1Q9D3V5 435 aa13.24□□□□□ -0.29
Herc4-208ENSMUST00000219577 Cyp2s1Q9DBX6 501 aa13.24□□□□□ -0.29
Herc4-208ENSMUST00000219577 AllcQ9JHX6 414 aa13.24□□□□□ -0.29
Herc4-208ENSMUST00000219577 Dpf1Q9QX66 387 aa13.24□□□□□ -0.29
Herc4-208ENSMUST00000219577 FocadA2AKG8 1798 aa13.24□□□□□ -0.29
Herc4-208ENSMUST00000219577 Pcdha4O88689 947 aa13.24□□□□□ -0.29
Herc4-208ENSMUST00000219577 Gja5Q01231 358 aa13.24□□□□□ -0.29
Herc4-208ENSMUST00000219577 Tatdn3Q3U1C6 294 aa13.24□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms