RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Tnrc6bQ8BKI2 1810 aaKnown RBP10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Gpr161B2RPY5 545 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Kcnh2O35219 1162 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Man1a2P39098 641 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 NyxP83503 476 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Kcnb1Q03717 857 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 DeptorQ570Y9 409 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Tnni3kQ5GIG6 834 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Ccdc92bQ5SUE3 299 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 NntQ61941 1086 aaKnown RBP10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Zfp341Q6PGC9 846 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Pdzph1Q8BGR1 1238 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Slc44a4Q91VA1 707 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Rrp1bQ91YK2 724 aaKnown RBP10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Bbs5Q9CZQ9 341 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 IqcdQ9D3V1 458 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Itga2bQ9QUM0 1033 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Trp53inp1Q9QXE4 239 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Kif20bQ80WE4 1774 aaKnown RBP10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Gm4297D3YWB7 211 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Ccdc24E9PUW8 296 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Acot6Q32Q92 419 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Zcwpw1Q6IR42 630 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 CtifQ6PEE2 600 aaKnown RBP10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 GopcQ8BH60 463 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Sap130Q8BIH0 1057 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Scfd1Q8BRF7 639 aaKnown RBP10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Slc12a8Q8VI23 705 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Spc24Q9D083 201 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Frmpd4A2AFR3 1320 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Sclt1G5E861 688 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Gsta4P24472 222 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Rhbdl3P58873 404 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 PtgdrP70263 357 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Sema3eP70275 775 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Irx2P81066 474 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Irak1Q62406 710 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 ZyxQ62523 564 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Tcp10aQ80W76 438 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Osbpl2Q8BX94 484 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Xpo5Q924C1 1204 aaKnown RBP10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Add1Q9QYC0 735 aaKnown RBP10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 1700003F12RikA2AKE5 210 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Krt8P11679 490 aaKnown RBP10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Cyp11b2P15539 500 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Surf6P70279 355 aaKnown RBP10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Psmd1Q3TXS7 953 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Tlr13Q6R5N8 991 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Morc2bQ8C5W4 1022 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Thap12Q9CUX1 758 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Mxra7Q9CZH7 178 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Sept3Q9Z1S5 350 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Topaz1E5FYH1 1653 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Rimbp3Q3V0F0 1606 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Tal1P22091 329 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Ap1m1P35585 423 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 SbdsP70122 250 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Pla2g4eQ50L42 875 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Mrps31Q61733 384 aaKnown RBP10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Crybg3Q80W49 1005 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Eps8l1Q8R5F8 716 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 EpgnQ924X1 152 aa10.28□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Gm11985A0A1B0GS61 206 aa10.27□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Gm14525B1AZA0 212 aa10.27□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Gm2012B1B0R1 212 aa10.27□□□□□ -0.76
Ldlr-202ENSMUST00000213114 TxkP42682 527 aa10.27□□□□□ -0.76
Ldlr-202ENSMUST00000213114 IvlP48997 467 aa10.27□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Kctd16Q5DTY9 427 aa10.27□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Psen2Q61144 448 aa10.27□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Gm14819Q62478 212 aa10.27□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Churc1Q6DG52 112 aa10.27□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Cacna2d2Q6PHS9 1154 aa10.27□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Ccdc87Q8CDL9 855 aa10.27□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Atp5c1Q91VR2 298 aaKnown RBP10.27□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Eif2ak1Q9Z2R9 619 aa10.27□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Proca1B0QZF7 307 aa10.27□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Tmem132bF7BAB2 1078 aa10.27□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Snx12O70493 165 aa10.27□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Myo1fP70248 1099 aa10.27□□□□□ -0.77
Ldlr-202ENSMUST00000213114 EsrrbQ61539 433 aa10.27□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Washc1Q8VDD8 475 aa10.27□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Paip2Q9D6V8 124 aa10.27□□□□□ -0.77
Ldlr-202ENSMUST00000213114 MycbpQ9EQS3 103 aa10.27□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Git2Q9JLQ2 708 aa10.27□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Gm43738A0A0G2JEA5 862 aa10.27□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Lcmt1A0A0U1RNF2 332 aa10.27□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Stat4P42228 749 aa10.27□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Akr1b1P45376 316 aa10.27□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Eef1dP57776 281 aaKnown RBP10.27□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Skap2Q3UND0 358 aa10.27□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Slc26a7Q8R2Z3 656 aa10.27□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Vps33aQ9D2N9 598 aa10.27□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Bcl2l12Q9D3J3 255 aa10.27□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Stk32bQ9JJX8 414 aa10.27□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Ttc38A3KMP2 465 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Vsnl1P62761 191 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 TchpQ3TVW5 497 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Tmed8Q3UHI4 326 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Scnn1aQ61180 699 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Asnsd1Q8BFS9 627 aa10.26□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms