RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Ccng2O08918 344 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 SfnO70456 248 aaKnown RBP9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 MybP06876 636 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 TdgP56581 421 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 Lmntd2Q0VET5 664 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 Rufy4Q3TYX8 563 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 Usp28Q5I043 1051 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 Gas7Q60780 421 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 ShbQ6PD21 503 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 Zbed4Q80WQ9 1168 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 Ppp2r5dQ91V89 594 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 NenfQ9CQ45 171 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 Pkp2Q9CQ73 795 aaKnown RBP9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 Trip11E9Q512 1976 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 Vps13aQ5H8C4 3166 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 Gon4lQ9DB00 2260 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 Cyp26c1B2RXA7 518 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 Rsbn1lD3Z0K6 821 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 Tlk2O55047 718 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 Hoxc6P10629 235 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 PparaP23204 468 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 Mov10P23249 1004 aaKnown RBP9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 StamP70297 548 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 Rnf207Q3V3A7 635 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 Fam189a2Q4FZH1 290 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 MaeaQ4VC33 396 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 Gpd2Q64521 727 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 Nap1l3Q794H2 544 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 LppQ8BFW7 613 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 Iws1Q8C1D8 766 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 Ppp1r16bQ8VHQ3 568 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 Kdm4bQ91VY5 1086 aa9.38□□□□□ -0.91
Trim39-205ENSMUST00000173369 Plcb2A3KGF7 1181 aa9.37□□□□□ -0.91
Trim39-205ENSMUST00000173369 Slc6a20bO88575 635 aa9.37□□□□□ -0.91
Trim39-205ENSMUST00000173369 Mtco1P00397 514 aa9.37□□□□□ -0.91
Trim39-205ENSMUST00000173369 Kcnj4P52189 445 aa9.37□□□□□ -0.91
Trim39-205ENSMUST00000173369 Ift122Q6NWV3 1182 aa9.37□□□□□ -0.91
Trim39-205ENSMUST00000173369 Ddx41Q91VN6 622 aaKnown RBP9.37□□□□□ -0.91
Trim39-205ENSMUST00000173369 Anapc4Q91W96 807 aa9.37□□□□□ -0.91
Trim39-205ENSMUST00000173369 Med24Q99K74 987 aa9.37□□□□□ -0.91
Trim39-205ENSMUST00000173369 Dnajc18Q9CZJ9 357 aa9.37□□□□□ -0.91
Trim39-205ENSMUST00000173369 PolkQ9QUG2 852 aa9.37□□□□□ -0.91
Trim39-205ENSMUST00000173369 Cdc42ep5Q9Z0X0 150 aa9.37□□□□□ -0.91
Trim39-205ENSMUST00000173369 Mki67E9PVX6 3177 aaKnown RBP9.37□□□□□ -0.91
Trim39-205ENSMUST00000173369 Ttc6G3UYY4 1857 aa9.37□□□□□ -0.91
Trim39-205ENSMUST00000173369 Cep290Q6A078 2472 aa9.37□□□□□ -0.91
Trim39-205ENSMUST00000173369 Baz2bA2AUY4 2123 aa9.37□□□□□ -0.91
Trim39-205ENSMUST00000173369 Gm10436L7N1Y3 520 aa9.37□□□□□ -0.91
Trim39-205ENSMUST00000173369 Psmc6P62334 389 aa9.37□□□□□ -0.91
Trim39-205ENSMUST00000173369 Col19a1Q0VF58 1136 aa9.37□□□□□ -0.91
Trim39-205ENSMUST00000173369 Cwf19l2Q8BG79 887 aaKnown RBP9.37□□□□□ -0.91
Trim39-205ENSMUST00000173369 Clic6Q8BHB9 596 aa9.37□□□□□ -0.91
Trim39-205ENSMUST00000173369 Trim29Q8R2Q0 587 aa9.37□□□□□ -0.91
Trim39-205ENSMUST00000173369 Slc25a38Q91XD8 326 aa9.37□□□□□ -0.91
Trim39-205ENSMUST00000173369 Dnajc19Q9CQV7 116 aa9.37□□□□□ -0.91
Trim39-205ENSMUST00000173369 Extl2Q9ES89 330 aa9.37□□□□□ -0.91
Trim39-205ENSMUST00000173369 Acot9Q9R0X4 439 aaKnown RBP9.37□□□□□ -0.91
Trim39-205ENSMUST00000173369 TroapB7ZNG4 668 aa9.36□□□□□ -0.91
Trim39-205ENSMUST00000173369 Olfr67F8VPJ8 320 aa9.36□□□□□ -0.91
Trim39-205ENSMUST00000173369 TazI7HJS2 263 aa9.36□□□□□ -0.91
Trim39-205ENSMUST00000173369 Gm3138K7N754 218 aa9.36□□□□□ -0.91
Trim39-205ENSMUST00000173369 Btg4O70552 250 aa9.36□□□□□ -0.91
Trim39-205ENSMUST00000173369 Apba3O88888 571 aa9.36□□□□□ -0.91
Trim39-205ENSMUST00000173369 Prl2c1Q5SVL9 228 aa9.36□□□□□ -0.91
Trim39-205ENSMUST00000173369 Crhr2Q60748 411 aa9.36□□□□□ -0.91
Trim39-205ENSMUST00000173369 Mrgprx1Q8CIP3 322 aa9.36□□□□□ -0.91
Trim39-205ENSMUST00000173369 Maged1Q9QYH6 775 aaKnown RBP9.36□□□□□ -0.91
Trim39-205ENSMUST00000173369 G430095P16RikE9Q913 147 aa9.36□□□□□ -0.91
Trim39-205ENSMUST00000173369 RarbP22605 482 aa9.36□□□□□ -0.91
Trim39-205ENSMUST00000173369 Rnf19aP50636 840 aa9.36□□□□□ -0.91
Trim39-205ENSMUST00000173369 Dph1Q5NCQ5 438 aa9.36□□□□□ -0.91
Trim39-205ENSMUST00000173369 Ctdspl2Q8BG15 465 aa9.36□□□□□ -0.91
Trim39-205ENSMUST00000173369 Vmn1r203Q8R273 311 aa9.36□□□□□ -0.91
Trim39-205ENSMUST00000173369 Hs2st1Q8R3H7 356 aa9.36□□□□□ -0.91
Trim39-205ENSMUST00000173369 Josd2Q9CR30 188 aa9.36□□□□□ -0.91
Trim39-205ENSMUST00000173369 Unc80Q8BLN6 3261 aa9.36□□□□□ -0.91
Trim39-205ENSMUST00000173369 PatjQ63ZW7 1834 aa9.36□□□□□ -0.91
Trim39-205ENSMUST00000173369 Arhgef10lA2AWP8 1280 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 UgcgO88693 394 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Il2rbP16297 539 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Pex1Q5BL07 1284 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Kcnj11Q61743 390 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 NfrkbQ6PIJ4 1296 aaKnown RBP9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Csrnp2Q8BGQ2 534 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Haus7Q8BKT8 364 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Fam177a1Q8BR63 207 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 R3hcc1Q8BSI6 488 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Fermt2Q8CIB5 680 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Q8K2W9 541 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Hnrnpul1Q8VDM6 859 aaKnown RBP9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Trub2Q91WG3 331 aaKnown RBP9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Ndufa8Q9DCJ5 172 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 FibpQ9JI19 357 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Bdp1Q571C7 2467 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Gm43951A0A0N4SUT6 962 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Gm3095E9Q058 166 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Tpd52l1O54818 204 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Sept4P28661 478 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Cyp2c38P56655 490 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Etv6P97360 485 aa9.35□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms