RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 4921524L21RikQ9D5T2 438 aa16.91■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Acot3Q9QYR7 432 aa16.91■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Atp8b1Q148W0 1251 aa16.91■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Ugt1a8D3Z748 530 aa16.91■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Ugt1a10E9PXN7 530 aa16.91■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Nedd4P46935 887 aaKnown RBP16.91■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Ccdc51Q3URS9 406 aa16.91■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Scnn1aQ61180 699 aa16.91■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 PrimpolQ6P1E7 537 aa16.91■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Cbwd1Q8VEH6 393 aa16.91■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Rrp1bQ91YK2 724 aaKnown RBP16.91■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Gdap1O88741 358 aa16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 XlrP05531 208 aa16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 CatspereP0DP43 985 aa16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Adcy7P51829 1099 aa16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 GssP51855 474 aa16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 EnahQ03173 802 aa16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Zfp341Q6PGC9 846 aa16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Morc2bQ8C5W4 1022 aa16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Gfpt2Q9Z2Z9 682 aa16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Cdc27A2A6Q5 825 aa16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 RilpQ5ND29 369 aa16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Mrpl11Q9CQF0 192 aaKnown RBP16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Gm3893E9Q1I1 302 aa16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Cyp11b2P15539 500 aa16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Xrcc5P27641 732 aa16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Eps15P42567 897 aa16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Akr1b8P45377 316 aa16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Setd4P58467 439 aa16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Ppp1r12cQ3UMT1 782 aa16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Znf652Q5DU09 608 aa16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 RaraP11416 462 aa16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Slc2a13Q3UHK1 637 aa16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Ttbk2Q3UVR3 1243 aa16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Ddx3yQ62095 658 aaKnown RBP16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Tada3Q8R0L9 432 aa16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Filip1Q9CS72 1211 aa16.9■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 TxkP42682 527 aa16.89■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Trim9Q8C7M3 817 aa16.89■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 C130026I21RikQ8C898 291 aa16.89■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Tmem60Q8K174 133 aa16.89■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 Pcdhb2Q91Y00 799 aa16.89■□□□□ 0.3
Ccdc88b-201ENSMUST00000113440 A0A286YCQ6 122 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Bfsp1A2AMT1 669 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Lmnb2P21619 596 aaKnown RBP16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Pla2g4aP47713 748 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Fhdc1Q3ULZ2 1149 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Znf827Q505G8 1078 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Slc30a9Q5IRJ6 567 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Myo19Q5SV80 963 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Mapk6Q61532 720 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Ankfy1Q810B6 1169 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Bzw2Q91VK1 419 aaKnown RBP16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 4931423N10RikQ9D4J9 382 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Igsf9bE9PZ19 1328 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Pabpc1lA2A5N3 607 aaKnown RBP16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Sh2d4bA6X942 431 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Gm5134E9QAB5 671 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Stat3P42227 770 aaKnown RBP16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 CtifQ6PEE2 600 aaKnown RBP16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Kctd3Q8BFX3 815 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Gbp9Q8BTS3 619 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Serpinb3bQ9D1Q5 387 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Itga2bQ9QUM0 1033 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Nek3Q9R0A5 511 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 RpgrQ9R0X5 1001 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 GpiP06745 558 aaKnown RBP16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Gsta4P24472 222 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Myo1fP70248 1099 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Gpr101Q80T62 511 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Hpcal4Q8BGZ1 191 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Q8K2W9 541 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Tpd52l2Q9CYZ2 220 aaKnown RBP16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Tob2Q9JM55 345 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Usp14Q9JMA1 493 aaKnown RBP16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Ddx25Q9QY15 484 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 C3P01027 1663 aa16.89■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Vmn2r78K7N6U5 853 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Vmn2r71L7N2D8 855 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Chrna5Q2MKA5 467 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Mtmr6Q8VE11 617 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Myo1cQ9WTI7 1063 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Man1a2P39098 641 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Cracr2aQ3UP38 310 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Usp13Q5BKP2 858 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Ulk4Q3V129 1303 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 1700016G14RikA0A286YCZ6 238 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Serpina16D3Z660 418 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Vmn2r79E9Q067 851 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Serpinb8O08800 374 aaKnown RBP16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 NyxP83503 476 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Dpcr1Q3TNW5 500 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Vars2Q3U2A8 1060 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Olfr121Q5CZY0 321 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Ms4a5Q810P8 197 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 GopcQ8BH60 463 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Spice1Q8C804 860 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Cplx3Q8R1B5 158 aa16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Xpo5Q924C1 1204 aaKnown RBP16.88■□□□□ 0.29
Ccdc88b-201ENSMUST00000113440 Rgs22G3UYX5 1258 aa16.88■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms