RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Pbx1P41778 430 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 GalcP54818 684 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Trim43aQ3TL54 445 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 BC051142Q3V0M8 400 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Hoxa13Q62424 386 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Wdr44Q6NVE8 915 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Fgd5Q80UZ0 1219 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Dlg1Q811D0 905 aaKnown RBP10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Micall1Q8BGT6 870 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 SfpqQ8VIJ6 699 aaKnown RBP10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Mmtag2Q99LX5 260 aaKnown RBP10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 1700018B08RikQ9DA83 213 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Map2k1P31938 393 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Rpl13P47963 211 aaKnown RBP10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Tmem35bQ3U0Y2 150 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Clul1Q3ZRW6 464 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Pim2Q62070 370 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Pank4Q80YV4 820 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Cfap53Q9D439 514 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Pacsin2Q9WVE8 486 aaKnown RBP10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Scgb2b11A0A087WR49 112 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 H2afzP0C0S6 128 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Atp8a1P70704 1164 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 H2afvQ3THW5 128 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Ica1lQ3TY65 431 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 EsrrbQ61539 433 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Q8C6G1 249 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Dr1Q91WV0 176 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Atp6v0a4Q920R6 833 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Q922C1 641 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Mtmr2Q9Z2D1 643 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Psmd10Q9Z2X2 231 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Gm2030D3Z7C4 212 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 E9QMW4 1145 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Kcnh2O35219 1162 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Tmod1P49813 359 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Traf5P70191 558 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Krt9Q6RHW0 743 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Spats2Q8K1N4 545 aaKnown RBP10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Cep19Q9CQA8 163 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Rpf2Q9JJ80 306 aaKnown RBP10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Ddx25Q9QY15 484 aa10.65□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 JcadQ5DTX6 1320 aa10.65□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Pgrmc1O55022 195 aa10.65□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Acbd5Q5XG73 508 aa10.65□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Fhod1Q6P9Q4 1197 aa10.65□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Parp10Q8CIE4 960 aa10.65□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Tldc1Q8K0P3 455 aa10.65□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Acot3Q9QYR7 432 aa10.65□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Sema4dO09126 861 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 AgtP11859 477 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Mcm5P49718 733 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Spata18Q0P557 537 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Fhdc1Q3ULZ2 1149 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Pacsin1Q61644 441 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Znf280dQ68FE8 974 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Sestd1Q80UK0 696 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Tor4aQ8BH02 426 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 AsphQ8BSY0 741 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Ildr1Q8CBR1 537 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 SncbQ91ZZ3 133 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Fam133bQ9CVI2 245 aaKnown RBP10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Mcur1Q9CXD6 340 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 ToporslQ9D2F8 683 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Mybl2P48972 704 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Gjb6P70689 261 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Acot6Q32Q92 419 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Serpinb6dQ3UWK8 375 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Lrig2Q52KR2 1054 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Hdac10Q6P3E7 666 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Lrrc45Q8CIM1 670 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Arl2bpQ9D385 163 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Angptl3Q9R182 455 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Pcdh11xF6ZNL5 1338 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Nova2D3YVV7 556 aaKnown RBP10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Kdm7aQ3UWM4 940 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Gbp4Q61107 620 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 PolrmtQ8BKF1 1207 aaKnown RBP10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Ccdc28aQ8CEI3 192 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Afg3l2Q8JZQ2 802 aaKnown RBP10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Cplx3Q8R1B5 158 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Ttll1Q91V51 423 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Plagl2Q925T4 496 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 HgsQ99LI8 775 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Rhobtb3Q9CTN4 611 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Tmem192Q9CXT7 266 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 ThegQ9JMB1 375 aa10.64□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Ercc5P35689 1170 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Wee1P47810 646 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Psd3Q2PFD7 1037 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Sco1Q5SUC9 284 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Papd7Q6PB75 542 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Lgi2Q8K4Z0 550 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Slc35f6Q8VE96 372 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Pstpip2Q99M15 334 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Tex19.1Q99MV2 351 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Pla2g12bQ99P27 195 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 4930449I24RikQ9D5E3 319 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 MefvQ9JJ26 767 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Adgrf5G5E8Q8 1348 aa10.63□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms