RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Cep55Q8BT07 462 aa9.71□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Dpf1Q9QX66 387 aa9.71□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Ccdc183A2AJB1 534 aa9.71□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Dnajc25A2ALW5 357 aa9.71□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Ace3D0G895 737 aa9.71□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Ppp1r36D3Z0R2 411 aa9.71□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Vps33bP59016 617 aa9.71□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Cct7P80313 544 aa9.71□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Uhmk1P97343 419 aa9.71□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Armc2Q3URY6 854 aa9.71□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Gas2l2Q5SSG4 860 aa9.71□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Tsr1Q5SWD9 803 aa9.71□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Rcbtb1Q6NXM2 531 aa9.71□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Dr1Q91WV0 176 aa9.71□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Q9CQC3 228 aa9.71□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Coro1bQ9WUM3 484 aaKnown RBP9.71□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Arih2Q9Z1K6 492 aa9.71□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Cdr2lA2A6T1 465 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Pold2O35654 469 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Dapk3O54784 448 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Ets2P15037 468 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Cage1Q5IR70 849 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Q6PAC4 1279 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Nod1Q8BHB0 953 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Clic6Q8BHB9 596 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Mill1Q8HWE7 395 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Map4k3Q99JP0 894 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 StambpQ9CQ26 424 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Arhgef7Q9ES28 862 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Pet2A2AHY8 747 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Gm28043E0CXC2 719 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Xirp1O70373 1129 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Zscan2Q07230 614 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 N6amt1Q6SKR2 214 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Smarcal1Q8BJL0 910 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Cdan1Q8CC12 1239 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Vps53Q8CCB4 832 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Tbx22Q8K402 517 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Slc2a5Q9WV38 501 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Akap10O88845 662 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 PrkceP16054 737 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Gbp5Q8CFB4 590 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Vmn1r199Q8R280 367 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Gm28042B7ZCM9 1014 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Agbl1Q09M05 972 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Mier2Q3U3N0 541 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Smndc1Q8BGT7 238 aaKnown RBP9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 TbcdQ8BYA0 1196 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Trim47Q8C0E3 641 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Usp37Q8C0R0 979 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Gcc1Q9D4H2 778 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Atp2b2Q9R0K7 1198 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Cetn2Q9R1K9 172 aa9.7□□□□□ -0.86
Clcn3-202ENSMUST00000056508 FesP16879 822 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Pex1Q5BL07 1284 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Smg7Q5RJH6 1138 aaKnown RBP9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Dnajc8Q6NZB0 253 aaKnown RBP9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Ccdc148Q6P5U8 527 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Gpr156Q6PCP7 798 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Rnf220Q6PDX6 566 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Armcx3Q8BHS6 379 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Spc24Q9D083 201 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Ankef1Q9D2J7 775 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Trim5E9PV98 497 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Neu1O35657 409 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Limk2O54785 638 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Lad1P57016 528 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Gsdma2Q32M21 443 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Rnf10Q3UIW5 804 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 P2rx5Q3UYI1 455 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Gm14685Q52KH6 695 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Gnl3lQ6PGG6 577 aaKnown RBP9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Tas2r115Q7M719 310 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 KhnynQ80U38 671 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Wdr37Q8CBE3 496 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Saal1Q9D2C2 474 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Smco2Q9DA21 347 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Gm6465F7A7Y6 181 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Gm8897L7N294 181 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Gm8906L7N2A2 181 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Mpp3O88910 568 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Camk2aP11798 478 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Cbx1P83917 185 aaKnown RBP9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Bach2P97303 839 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Kiaa1468Q148V7 1216 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Zc3hav1Q3UPF5 946 aaKnown RBP9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Necab1Q8BG18 352 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 TxlngQ8BHN1 524 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Nrbf2Q8VCQ3 287 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Wdr45bQ9CR39 344 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Sun5Q9DA32 373 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Atn1O35126 1175 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Ppp1r15aP17564 657 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Rgs9bpQ148R9 237 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 AarsQ8BGQ7 968 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Cfap69Q8BH53 942 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Klhl30Q8C3F7 581 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 NaxeQ8K4Z3 282 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Ndufab1Q9CR21 156 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Golga1Q9CW79 758 aa9.69□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 45 ms