RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 HltfQ6PCN7 1003 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Atg3Q9CPX6 314 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Morf4l2Q9R0Q4 288 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Nccrp1G3X9C2 266 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Klc2O88448 599 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Taf5lQ91WQ5 589 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Snx5Q9D8U8 404 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Ap2b1Q9DBG3 937 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Gm15262A0A140LIQ5 728 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Kcna1P16388 495 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Alox15P39654 663 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Mphosph6Q9D1Q1 161 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Fosl2P47930 326 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Nfe2l3Q9WTM4 660 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 OvosQ3UU35 1456 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Trim5E9PV98 497 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Foxp1P58462 705 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Rbm43Q99J64 343 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Pdxdc1Q99K01 787 aaKnown RBP16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Ano3A2AHL1 981 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Gfpt1P47856 697 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Stxbp3Q60770 592 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Creb3Q61817 404 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Rcor2Q8C796 523 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Krt17Q9QWL7 433 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Cul1Q9WTX6 776 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Gipc2Q9Z2H7 314 aa16.85■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Fxr1Q61584 677 aaKnown RBP16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Ivns1abpQ920Q8 642 aa16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Ssfa2Q922B9 1252 aa16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Ssh2Q5SW75 1423 aa16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Mapkbp1Q6NS57 1503 aa16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Ppargc1aO70343 797 aa16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Rasgrf2P70392 1189 aa16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 4930504O13RikQ8C5Z9 145 aa16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Ranbp17Q99NF8 1088 aa16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Casq2O09161 415 aa16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Epas1P97481 874 aa16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 MlklQ9D2Y4 472 aa16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Cul4bA2A432 970 aaKnown RBP16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Rsbn1lD3Z0K6 821 aa16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Gucy2gQ6TL19 1100 aa16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Recql4Q75NR7 1216 aaKnown RBP16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Riox2Q8CD15 465 aa16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Cacnb1Q8R3Z5 597 aa16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 SelenovD3YXG1 328 aa16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Kmt5aQ2YDW7 349 aa16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Pcdhb15Q91Y04 786 aa16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Tceal1Q921P9 165 aa16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Ubxn11Q9D572 484 aa16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Ugt1a5B2RT14 529 aa16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Zfp558E9Q1J0 407 aa16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Mettl17Q3U2U7 461 aa16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Krt72Q6IME9 520 aa16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Crocc2F6XLV1 1638 aa16.84■□□□□ 0.29
Ubr3-201ENSMUST00000055758 CenpuQ8C4M7 410 aa16.83■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Scn2aA0A0J9YTW6 2006 aa16.83■□□□□ 0.29
Ubr3-201ENSMUST00000055758 GckP52792 465 aa16.83■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Atp8b1Q148W0 1251 aa16.83■□□□□ 0.29
Ubr3-201ENSMUST00000055758 HelqQ2VPA6 1069 aa16.83■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Prmt9Q3U3W5 846 aa16.83■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Nup107Q8BH74 926 aa16.83■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Med23Q80YQ2 1367 aa16.83■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Myo1aO88329 1043 aa16.83■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Serpind1P49182 478 aa16.83■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Nacc1Q7TSZ8 514 aa16.83■□□□□ 0.29
Ubr3-201ENSMUST00000055758 PaoxQ8C0L6 504 aa16.83■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Stn1Q8K2X3 378 aa16.83■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Rnf112Q96DY5 654 aa16.83■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Pstpip2Q99M15 334 aa16.83■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Ttc14Q9CSP9 761 aa16.83■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Rabgef1Q9JM13 491 aa16.83■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Foxo3Q9WVH4 672 aa16.83■□□□□ 0.29
Ubr3-201ENSMUST00000055758 Gm28360A0A087WR25 190 aa16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Ice1E9Q286 2241 aaKnown RBP16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 SftpbP50405 377 aa16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Gm12185Q5NCB2 835 aa16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Zfp113Q8C689 439 aa16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Trip10Q8CJ53 603 aa16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Aipl1Q924K1 328 aa16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Snx30Q8CE50 437 aa16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Wdr47Q8CGF6 920 aa16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Rab14Q91V41 215 aaKnown RBP16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Pold4Q9CWP8 107 aa16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Ndel1Q9ERR1 345 aa16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Pgrmc1O55022 195 aa16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 TpbpaP13438 124 aa16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 CiitaP79621 1155 aa16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Ccdc84Q4VA36 332 aaKnown RBP16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Washc5Q8C2E7 1159 aaKnown RBP16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Nek8Q91ZR4 698 aa16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Ccdc77Q9CZH8 489 aa16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Trpc4Q9QUQ5 974 aa16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 P4hbP09103 509 aaKnown RBP16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Tmem232Q5K6N0 675 aa16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 PawrQ925B0 333 aa16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Snx2Q9CWK8 519 aa16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Rrp15Q9CYX7 281 aaKnown RBP16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Tomm70Q9CZW5 611 aa16.83■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Tmod4Q9JLH8 345 aa16.83■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms