RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Klrc1Q9Z202 244 aa10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Pstpip1P97814 415 aa10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Dcaf17Q3TUL7 519 aa10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 KhsrpQ3U0V1 748 aaKnown RBP10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Znf697Q569E7 569 aa10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Foxd1Q61345 456 aa10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Naa35Q6PHQ8 725 aa10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Usp17leQ7M764 540 aa10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Trap1Q9CQN1 706 aaKnown RBP10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Galnt15Q9D2N8 638 aa10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Add1Q9QYC0 735 aaKnown RBP10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Klra10Q9R1G6 266 aa10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Marf1Q8BJ34 1730 aaKnown RBP10.77□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Acsbg2Q2XU92 667 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Stxbp3Q60770 592 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Fnbp4Q6ZQ03 1031 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Fnbp1Q80TY0 616 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Ddx10Q80Y44 875 aaKnown RBP10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 BC048507Q80ZS7 89 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Pak2Q8CIN4 524 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Spats2Q8K1N4 545 aaKnown RBP10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Kiaa1024Q8K3V7 917 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Mtmr4Q91XS1 1190 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Erp44Q9D1Q6 406 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Arl2bpQ9D385 163 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Gm5114W4VSN8 858 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Snap25P60879 206 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Lrrc36Q3V0M2 755 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Gm5169Q5M8P2 212 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Rbm26Q6NZN0 1012 aaKnown RBP10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Baiap3Q80TT2 1134 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Vwa5aQ99KC8 793 aaKnown RBP10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Josd2Q9CR30 188 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Q9D5Q8 446 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 LrmdaQ9D9B4 229 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 DexiQ9WUQ7 95 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Tnip1Q9WUU8 647 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Proca1B0QZF7 307 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Vmn2r68L7N2B3 851 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Kcnh2O35219 1162 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Nr2f2P43135 414 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Pcif1P59114 706 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Terf1P70371 421 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Rapgef1Q3UHC1 1224 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Tmprss11aQ3UQ41 389 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Lrig2Q52KR2 1054 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Krt14Q61781 484 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Lca5Q80ST9 704 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Haus1Q8BHX1 278 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Mxra8Q9DBV4 442 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Zfyve9A2A8R0 1397 aa10.76□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Rfpl4bJ3QPR6 266 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Lsm14bQ8CGC4 385 aaKnown RBP10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Lpin2Q99PI5 893 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Luc7lQ9CYI4 371 aaKnown RBP10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Trmt44Q9D2Q2 713 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Gtf2iQ9ESZ8 998 aaKnown RBP10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Ddx25Q9QY15 484 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Tjp2Q9Z0U1 1167 aaKnown RBP10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Scgb2b12S4R2L0 112 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Ltbp2O08999 1813 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Ltn1Q6A009 1767 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Gm4985A2ALC6 410 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Mroh9G5E8L9 891 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Gap43P06837 227 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Fbln1Q08879 705 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Dpcr1Q3TNW5 500 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 AsnsQ61024 561 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Ccdc189Q6NZQ0 333 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Zbed4Q80WQ9 1168 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Sgsm1Q8BPQ7 1093 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Q8BWG4 1187 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Msantd4Q91YU3 345 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 PccaQ91ZA3 724 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Lztr1Q9CQ33 837 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Map7d1A2AJI0 846 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Rps6ka1P18653 724 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 EgfrQ01279 1210 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Nsun7Q14AW5 724 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Trip13Q3UA06 432 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Spout1Q3UHX9 385 aaKnown RBP10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Arhgap44Q5SSM3 814 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Mybpc2Q5XKE0 1136 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Ttc22Q8C159 568 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 H6pdQ8CFX1 789 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 TxlnbQ8VBT1 685 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Smc6Q924W5 1097 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Txnrd3Q99MD6 652 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 PdhbQ9D051 359 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Cul5Q9D5V5 780 aa10.75□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Ttc38A3KMP2 465 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Vmn2r79E9Q067 851 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Orc4O88708 433 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Gdap1O88741 358 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Tmod1P49813 359 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 AdkP55264 361 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Eef2P58252 858 aaKnown RBP10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Psmc6P62334 389 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 SlmapQ3URD3 845 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Tsga10Q6NY15 697 aa10.74□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms