RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Pdrg1P59048 133 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Cracr2aQ3UP38 310 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Ccdc160Q3UYG1 323 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Cyb5d1Q5NCY3 228 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Mks1Q5SW45 561 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Satb1Q60611 764 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Arl13bQ640N2 427 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Haus4Q8BFT2 363 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Spats2lQ91WJ7 558 aaKnown RBP9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 SncbQ91ZZ3 133 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Prl2c5Q9JLV9 222 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Orc1Q9Z1N2 840 aaKnown RBP9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Ssc5dQ8BV57 1371 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Slc39a2G3X943 309 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 PrphP15331 475 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Hsd17b1P51656 344 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Mapk6Q61532 720 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Tlr13Q6R5N8 991 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 PodnQ7TQ62 611 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 MlphQ91V27 590 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Tor1aip1Q921T2 595 aaKnown RBP9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Glrx3Q9CQM9 337 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Sf3a3Q9D554 501 aaKnown RBP9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Msh5Q9QUM7 833 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Nr2e3Q9QXZ7 395 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Nav1Q8CH77 1875 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Pet2A2AHY8 747 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Map7d1A2AJI0 846 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Clip3B9EHT4 547 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Akr1c19G3X9Y6 323 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Stat4P42228 749 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Yipf3Q3UDR8 347 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 A1cfQ5YD48 595 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Sdccag8Q80UF4 717 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 LRWD1Q8BUI3 648 aaKnown RBP9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Lrrc45Q8CIM1 670 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 GlyctkQ8QZY2 523 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Nup133Q8R0G9 1155 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Rbm19Q8R3C6 952 aaKnown RBP9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Hs2st1Q8R3H7 356 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Rapgef3Q8VCC8 918 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Zbtb1Q91VL9 713 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Trim34aQ99PP6 485 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Serpinb12Q9D7P9 423 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 IydQ9DCX8 285 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Wdr46Q9Z0H1 622 aaKnown RBP9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Scgb2b12S4R2L0 112 aa9.04□□□□□ -0.96
Cdc40-201ENSMUST00000044166 4931408C20RikE9PWP9 1381 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Frmpd4A2AFR3 1320 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Apol6B7ZC55 329 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Nol4P60954 483 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 MaeaQ4VC33 396 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Klra8Q60682 266 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Rbm26Q6NZN0 1012 aaKnown RBP9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Dcaf5Q80T85 946 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 AarsQ8BGQ7 968 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Slc9b1Q8C0X2 565 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Snrnp35Q9D384 244 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Sapcd2Q9D818 391 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Rapgef4Q9EQZ6 1011 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Mapk8ip1Q9WVI9 707 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 GsdmeQ9Z2D3 512 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Gm21083A0A0G2JFD5 256 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Gm21149A0A0G2JFY7 255 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Speer4cG3UXD1 256 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Speer4eK7N6S8 255 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Gm17019K7N6W5 255 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Tuft1O08970 390 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Gap43P06837 227 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Alox15P39654 663 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Arhgap44Q5SSM3 814 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 LrmpQ60664 539 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Gas8Q60779 478 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Ccna1Q61456 421 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Nlrp9cQ66X01 1004 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 DlatQ8BMF4 642 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Dhx58Q99J87 678 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Ttc14Q9CSP9 761 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Fam173bQ9D1Z3 247 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Myh15E9Q264 1925 aa9.03□□□□□ -0.96
Cdc40-201ENSMUST00000044166 1700018F24RikB2RW27 314 aa9.02□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Flt3Q00342 1000 aa9.02□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Sh3gl1Q62419 368 aa9.02□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Znf280dQ68FE8 974 aa9.02□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Ehbp1Q69ZW3 1231 aa9.02□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Ublcp1Q8BGR9 318 aa9.02□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Ttc22Q8C159 568 aa9.02□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Trub2Q91WG3 331 aaKnown RBP9.02□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Tmem98Q91X86 226 aa9.02□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Ndufb5Q9CQH3 189 aa9.02□□□□□ -0.96
Cdc40-201ENSMUST00000044166 PlgrktQ9D3P8 147 aa9.02□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Capn9Q9D805 690 aa9.02□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Rwdd2aQ9D9S3 292 aa9.02□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Atp11cQ9QZW0 1129 aa9.02□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Hdac6Q9Z2V5 1149 aa9.02□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Aox3G3X982 1335 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 GakQ99KY4 1305 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Clcn6O35454 870 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Krt18P05784 423 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 GnaqP21279 359 aa9.02□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms